ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet70a08 |
|---|---|
| Clone Library Name | barley_pub |
>ING3_HUMAN (Q9NXR8) Inhibitor of growth protein 3 (p47ING3 protein)| Length = 418 Score = 32.3 bits (72), Expect = 0.29 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +1 Query: 43 TPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATIS 201 TPSQ ++ + H+ T V + + NPT+ +T T + ++ L ST+ + S Sbjct: 128 TPSQPVNNHHAHSHTPVEKRKYNPTSHHTTTDHIPEKKFKSEALLSTLTSDAS 180
>DOPO_MOUSE (Q64237) Dopamine beta-hydroxylase precursor (EC 1.14.17.1)| (Dopamine beta-monooxygenase) Length = 621 Score = 32.0 bits (71), Expect = 0.38 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = +1 Query: 184 MHATISHVPCWLTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGS 318 M A +SH PCW + PSP + + ++ + I + I VAA L GS Sbjct: 1 MQAHLSHQPCWSSLPSPSVREAASMYGTAVAIFLVILVAA-LRGS 44
>YFGC_SHIFL (P66949) Hypothetical protein yfgC precursor| Length = 487 Score = 31.2 bits (69), Expect = 0.65 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 28 SEGNSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHAT 195 S G S A S+ + ++N EIN A + + LHS L N QL S M Sbjct: 78 SLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHE 137 Query: 196 ISHV 207 ISHV Sbjct: 138 ISHV 141
>YFGC_ECOLI (P66948) Hypothetical protein yfgC precursor| Length = 487 Score = 31.2 bits (69), Expect = 0.65 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 28 SEGNSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHAT 195 S G S A S+ + ++N EIN A + + LHS L N QL S M Sbjct: 78 SLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHE 137 Query: 196 ISHV 207 ISHV Sbjct: 138 ISHV 141
>YFGC_ECO57 (Q8XAD2) Hypothetical protein yfgC precursor| Length = 487 Score = 31.2 bits (69), Expect = 0.65 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 28 SEGNSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHAT 195 S G S A S+ + ++N EIN A + + LHS L N QL S M Sbjct: 78 SLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHE 137 Query: 196 ISHV 207 ISHV Sbjct: 138 ISHV 141
>Y3069_YERPE (Q8ZCC3) Hypothetical protein YPO3069/y1412/YP2691 precursor| Length = 486 Score = 30.8 bits (68), Expect = 0.85 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Frame = +1 Query: 34 GNSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATIS 201 GN + A S+ + +VN +IN A + + LHS L N +L S + IS Sbjct: 78 GNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEIS 137 Query: 202 HV-PCWLTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATV 339 HV L + + PL ++ + I + +A+ G +S T+ Sbjct: 138 HVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTL 184
>YFGC_SALTY (P66950) Hypothetical protein yfgC precursor| Length = 487 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 88 IVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV 207 ++N EIN A + + LHS L N QL S M ISHV Sbjct: 98 LINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHV 141
>YFGC_SALTI (P66951) Hypothetical protein yfgC precursor| Length = 487 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 88 IVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV 207 ++N EIN A + + LHS L N QL S M ISHV Sbjct: 98 LINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHV 141
>RDGB_DROME (P43125) Protein retinal degeneration B (Probable calcium transporter| rdgB) Length = 1259 Score = 30.8 bits (68), Expect = 0.85 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +1 Query: 1 DYPHCCINFSEGNSTPSQAISILYLHNKTIVNRHEINPTASY 126 ++PH I+F++G ST YL+N +V H I+ TA+Y Sbjct: 1120 NFPHGLISFADGLSTDPLGHKTAYLNN--LVQNHGISITAAY 1159
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 70 YLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKP 249 YL++ + EI PT+ + N+ T K N+QLQ + ++P WLT +L K Sbjct: 1487 YLYDNAMCK--EIIPTSEFINS---KLTAKANRQLQDPLVIMTGNIPTWLT----ELGKT 1537 Query: 250 HPLWY 264 P ++ Sbjct: 1538 CPFFF 1542
>FGFR1_RAT (Q04589) Basic fibroblast growth factor receptor 1 precursor (EC| 2.7.10.1) (FGFR-1) (bFGF-R) (MFR) Length = 822 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 196 ISHVPCWLTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTGT 363 +SH WLT ++P + PLY++I IY S V + +I K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMVGSVIIYKMKSGT 403
>DPOL_CBEPV (P30319) DNA polymerase (EC 2.7.7.7)| Length = 964 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +3 Query: 105 NKPNS*LHKYYTAALYSQKQSTVTIN 182 NK N L+ YYT+ALYS+K +TIN Sbjct: 650 NKNNPVLYNYYTSALYSKK---ITIN 672
>FGFR1_HUMAN (P11362) Basic fibroblast growth factor receptor 1 precursor (EC| 2.7.10.1) (FGFR-1) (bFGF-R) (Fms-like tyrosine kinase 2) (c-fgr) (CD331 antigen) Length = 822 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 Query: 196 ISHVPCWLTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTGT 363 +SH WLT ++P + PLY++I IY S V + ++ K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMVGSVIVYKMKSGT 403
>CP392_DROME (P82713) Probable cytochrome P450 309a2 (EC 1.14.-.-) (CYPCCCIXA2)| Length = 538 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 65 SCTYTTKQLSIAMK*TQQLVTQILYSCTLLSKTINSYNQLCTQPS 199 SC + K L + Q + Q++Y LS I Y ++CT P+ Sbjct: 372 SCMASEKSLDFEKLSSLQYLEQVIYESLRLSSLIPQYTKVCTLPT 416
>ZFA_MOUSE (P23607) Zinc finger autosomal protein| Length = 742 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 1 DYPHCCINFSEGNSTPSQAISILYLHNKTI 90 DYPHCC + +G PS+ + H+K + Sbjct: 710 DYPHCCEHCKKGFRRPSEKNQHIMRHHKEV 739
>ASF2_YEAST (P32448) Anti-silencing protein 2| Length = 525 Score = 29.6 bits (65), Expect = 1.9 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%) Frame = +3 Query: 66 LVLTQQNNCQSP*NKPNS*LHKYYTAALYSQKQSTVTINYA--RNHLTR---PLLVNLAF 230 L+L+Q +N Q N P L YS+K +T+ ++Y+ +++L+R P + NL Sbjct: 402 LLLSQHSNHQEIDNTPQRLLLAAPDGQSYSEKSTTLNLDYSSRKSYLSRLQPPHIANLKS 461 Query: 231 ATIR--QTTPTMVP--PSLHRHQHICSSD 305 T++ PT P PS + Q D Sbjct: 462 LTLKTLPRVPTDSPQLPSKDKSQETAKKD 490
>G168_PARPR (P17053) G surface protein, allelic form 168 precursor| Length = 2704 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 Query: 263 YHSGCGLSNCGEGQVNQQGTCEMVACIVDCN 171 YHS C LSN G G V CE + CN Sbjct: 539 YHSTCTLSNSGTGCVPLPLKCEAITIEAACN 569
>G156_PARPR (P13837) G surface protein, allelic form 156 precursor| Length = 2715 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 Query: 263 YHSGCGLSNCGEGQVNQQGTCEMVACIVDCN 171 YHS C LSN G G V CE + CN Sbjct: 545 YHSTCTLSNSGTGCVPLPLKCEAITIEAACN 575
>MHP1_YEAST (P43638) MAP-homologous protein 1| Length = 1398 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 189 RNHLTRPLLVNLAFATIRQTT-PTMVPPSLHRHQHICSSDFNRISISICHRHSQRGHRH 362 R+ + LL++ A T+ PT +PP R + + ++ + + H H R H H Sbjct: 79 RHSVAASLLMDNQRANAGSTSVPTNIPPPRGRSKSVVETNLSNVEADSGHHHHHRHHHH 137
>FGFR1_MOUSE (P16092) Basic fibroblast growth factor receptor 1 precursor (EC| 2.7.10.1) (FGFR-1) (bFGF-R) (MFR) Length = 822 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 Query: 196 ISHVPCWLTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTGT 363 +SH WLT ++P + PLY++I IY S + + +I K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMLGSVIIYKMKSGT 403
>ADAB_BACSU (P19220) Methylated-DNA--protein-cysteine methyltransferase (EC| 2.1.1.63) (O-6-methylguanine-DNA alkyltransferase) Length = 179 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 235 QLDKPHPLWYLPLYIDINIYVAATLTGSVSVSA 333 + +KP W L ++ D N Y+A+TL G V V + Sbjct: 2 ETNKPTLYWSLLMFKDWNFYIASTLKGLVFVGS 34
>CHID_VIBFU (P96156) Chitodextrinase precursor (EC 3.2.1.14)| Length = 1046 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 Query: 145 HSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLPL 273 H+ N L TMH +P W T P+ + ++YLP+ Sbjct: 904 HTRADNIGGLDGTMHRVAFSLPAWKTLPAGDTYELDMVYYLPI 946
>WNT5_HALRO (O15978) Protein Wnt-5 precursor| Length = 363 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -2 Query: 254 GCGLSNCGEGQVNQQGTCEMVACIVDCNC 168 GCGL CG G T +MV + CNC Sbjct: 317 GCGLMCCGRGY-----TTKMVEVVKSCNC 340
>NFKB1_CHICK (Q04861) Nuclear factor NF-kappa-B p105 subunit [Contains: Nuclear| factor NF-kappa-B p50 subunit] Length = 984 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 58 ISILYLHNKTIVNRHEINPTASYTNTIQLHSTL 156 +SI++LH + + N E+ P +Y N I + + L Sbjct: 547 LSIIHLHRELVKNLLEVMPDMNYNNIINMRNDL 579
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 254 GCGLSNCGEGQVNQQGTCEMVACIVDCN 171 GC S+CG+G N+QGTC AC C+ Sbjct: 542 GCE-SSCGKGFYNRQGTCS--ACDQSCD 566
>ATIN_HHV1F (P04486) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16| protein) (Alpha-TIF) Length = 479 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +3 Query: 177 INYARNHLTRPLLVNLAFATIRQTTPTMVPPSLHRHQHICSSDF 308 +N+ R HL PL+ + A T P PP+LH +Q S F Sbjct: 284 LNHIREHLNLPLVRSAA--TEEPGAPLTTPPTLHGNQARASGYF 325
>ATIN_HHV11 (P06492) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16| protein) (Alpha-TIF) Length = 490 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +3 Query: 177 INYARNHLTRPLLVNLAFATIRQTTPTMVPPSLHRHQHICSSDF 308 +N+ R HL PL+ + A T P PP+LH +Q S F Sbjct: 295 LNHIREHLNLPLVRSAA--TEEPGAPLTTPPTLHGNQARASGYF 336
>NAS36_CAEBR (Q61EX6) Zinc metalloproteinase nas-36 precursor (EC 3.4.24.21)| (Nematode astacin 36) Length = 614 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -2 Query: 338 TVADTDTDPVKVAATYMLMSM*RGRYHSGCGL--------SNCGEGQVNQQGTCEMVACI 183 T+A D V A + SM R GCG+ S EG+ + GTC + AC Sbjct: 495 TMAPITVDTPNVWADWGEWSM-CSRTCGGCGIRSRVRSCRSKKCEGRRQEFGTCNLKACP 553 Query: 182 VDCNC 168 VD +C Sbjct: 554 VDKHC 558
>ADA32_HUMAN (Q8TC27) ADAM 32 precursor (A disintegrin and metalloprotease| domain 32) Length = 787 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +1 Query: 214 WLTWPSPQLD-KPHPLWYLPLYIDINIYVAATLTGSVSVS 330 +L W L+ +PH + YL +Y+D Y+ A G++ ++ Sbjct: 258 FLEWKQSYLNLRPHDIAYLLIYMDYPRYLGAVFPGTMCIT 297
>NAS36_CAEEL (Q18206) Zinc metalloproteinase nas-36 precursor (EC 3.4.24.21)| (Nematode astacin 36) Length = 617 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -2 Query: 338 TVADTDTDPVKVAATYMLMSM*RGRYHSGCGL--------SNCGEGQVNQQGTCEMVACI 183 T+A D V A + SM R GCG+ S EG+ + GTC + AC Sbjct: 498 TLAPITVDAPNVWADWGEWSM-CSRTCGGCGIRSRVRSCRSKKCEGRRQEFGTCNLKACP 556 Query: 182 VDCNC 168 VD +C Sbjct: 557 VDKHC 561
>E41LB_HUMAN (Q9H329) Band 4.1-like protein 4B (EHM2 protein) (FERM-containing| protein CG1) Length = 913 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 18 HQFQ*REQHTESSHFDLVLTQQNNCQSP*NKPNS 119 HQ Q + QH S++ L LT +N + P PNS Sbjct: 492 HQHQHQHQHQHHSNYSLSLTLENK-EGPLRSPNS 524
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +1 Query: 106 INPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLP 270 + P +++ +T K N L ST+ + V C WP L K L YLP Sbjct: 23 VAPFNGLRSSVAFPATRKANNDL-STLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +1 Query: 106 INPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLP 270 + P +++ +T K N L ST+ + V C WP L K L YLP Sbjct: 23 VAPFNGLRSSVAFPATRKANNDL-STLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 Query: 106 INPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLP 270 + P +++ +T K N+ L ST+ + V C WP L K L YLP Sbjct: 23 VAPFNGLRSSVAFPATRKANKNL-STLPSNGGKVSCMQVWPPEGLKKFETLSYLP 76
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +1 Query: 130 NTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLP 270 +++ +T K N L ST+ ++ V C WP L K L YLP Sbjct: 27 SSVAFPATRKANNDL-STLPSSGGRVSCMQVWPPEGLKKFETLSYLP 72
>K1849_MOUSE (Q69Z89) Protein KIAA1849| Length = 1099 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 204 RPLLVNLAFATIRQTTPTMVPPSLHR 281 R L+ +++AT+R T P + P LHR Sbjct: 736 RAQLIQMSWATLRVTFPALNPAQLHR 761
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +1 Query: 112 PTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQLDKPHPLWYLP 270 P + +++ +T K N L ST+ + V C WP L K L YLP Sbjct: 25 PFNACRSSVPFPATRKANNDL-STLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76
>RS8_MYCHJ (Q4AAF4) 30S ribosomal protein S8| Length = 131 Score = 27.3 bits (59), Expect = 9.4 Identities = 24/108 (22%), Positives = 43/108 (39%) Frame = +1 Query: 37 NSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCW 216 N+T + ++ + H+KT V EI A Y Q+ LK N ++ +S + Sbjct: 17 NATIRKHKNVSFQHSKTKVKILEIIQKAGYIKDFQVEGDLKKNITVELKYKGNLSSISGL 76 Query: 217 LTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTG 360 P L +P ++ +A T ++ + RKE+ G Sbjct: 77 KRISKPSLRVYTSASKIP-FVQSGFGIAILSTSKGLLTDSQARKENVG 123
>RS8_MYCH7 (Q4A8I5) 30S ribosomal protein S8| Length = 131 Score = 27.3 bits (59), Expect = 9.4 Identities = 24/108 (22%), Positives = 43/108 (39%) Frame = +1 Query: 37 NSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCW 216 N+T + ++ + H+KT V EI A Y Q+ LK N ++ +S + Sbjct: 17 NATIRKHKNVSFQHSKTKVKILEIIQKAGYIKDFQVEGDLKKNITVELKYKGNLSSISGL 76 Query: 217 LTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTG 360 P L +P ++ +A T ++ + RKE+ G Sbjct: 77 KRISKPSLRVYTSASKIP-FVQSGFGIAILSTSKGLLTDSQARKENVG 123
>RS8_MYCH2 (Q601K0) 30S ribosomal protein S8| Length = 131 Score = 27.3 bits (59), Expect = 9.4 Identities = 24/108 (22%), Positives = 43/108 (39%) Frame = +1 Query: 37 NSTPSQAISILYLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCW 216 N+T + ++ + H+KT V EI A Y Q+ LK N ++ +S + Sbjct: 17 NATIRKHKNVSFQHSKTKVKILEIIQKAGYIKDFQVEGDLKKNITVELKYKGNLSSISGL 76 Query: 217 LTWPSPQLDKPHPLWYLPLYIDINIYVAATLTGSVSVSATVIRKEDTG 360 P L +P ++ +A T ++ + RKE+ G Sbjct: 77 KRISKPSLRVYTSASKIP-FVQSGFGIAILSTSKGLLTDSQARKENVG 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,593,550 Number of Sequences: 219361 Number of extensions: 1075987 Number of successful extensions: 3002 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3002 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
