>MTB_STRPU (Q27287) Metallothionein-B (MTB)|
          Length = 65

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -1

Query: 321 CKYGSECGCLSGCCVVFCIVGRPVTDG*V--PCLVVLIGYCLH*CRCSTFPSCRDG 160
           CK G+EC C    C   C +G+   DG     C       C   C C +  SC +G
Sbjct: 9   CKEGNECACTGQDC---CTIGKCCKDGTCCGKCSNAACKTCADGCTCGSGCSCTEG 61

>NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1099

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +2

Query: 158 TPSLQLGKVLQRH*C---RQYPIRTTRHGT*PSVTGLPTMQKTTQQPDRHPHSLPYLHAC 328
           TP+++    +Q H C   +  P   T     PS+T     ++ +  P   P SLP LH  
Sbjct: 380 TPTVRAKLTMQVHHCVVVKPTPAMLTTPS--PSLTTALLPEELSPSPSVLPPSLPDLHP- 436

Query: 329 NGRYPDD--TTEGLRQQWL 379
            G YP D  + E  RQ W+
Sbjct: 437 KGEYPPDLFSVEERRQGWV 455

>MTA_STRPU (P04734) Metallothionein-A (MTA)|
          Length = 64

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
 Frame = -1

Query: 321 CKYGSECGCLSGCCVVFCIVGRPVTDG*VPCLVVLIG---YCLH*CRCSTFPSCRDG 160
           CK G EC C    C   C  G    DG   C  +       C + C+C +  SC +G
Sbjct: 9   CKEGKECACFGQDC---CKTGECCKDG--TCCGICTNAACKCANGCKCGSGCSCTEG 60

>RENT1_HUMAN (Q92900) Regulator of nonsense transcripts 1 (EC 3.6.1.-)|
           (ATP-dependent helicase RENT1) (Nonsense mRNA reducing
           factor 1) (NORF1) (Up-frameshift suppressor 1 homolog)
           (hUpf1)
          Length = 1129

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 336 LPLHACKYGSECGCLSGCCVVFC 268
           LP+HAC Y   CG     CVV+C
Sbjct: 118 LPIHACSY---CGIHDPACVVYC 137

>USH_DROME (Q9VPQ6) Zinc-finger protein ush (Protein U-shaped)|
          Length = 1191

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +1

Query: 73   MSQNNTDPTGTGNNK*HDSSD----IFN*EYCNPIPT 171
            +SQ    PTG      HDS D    +FN +YCN + T
Sbjct: 957  LSQELVTPTGASTTTGHDSMDHPSQMFNCDYCNYVST 993

>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = -1

Query: 426 RPTSILSSNE*NIGPCSHC---CLSPSVVSSGYLPLHA-CKYGSECGCLSGCCVVFCIV 262
           RP S  S     + PC+     C +P V  +G  P H  C+   EC CL G     C V
Sbjct: 192 RPRSAPSRCGPGLRPCAPLEDECEAPLVCRAGCSPEHGFCEQPGECRCLEGWTGPLCTV 250

>LITAF_BRARE (Q6GMG8) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor homolog (LPS-induced TNF-alpha factor homolog)
          Length = 163

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 381 CSHCCLSPSVVSSGYLPLHACKYGSECGCLSGCCVV-FCI 265
           CS   ++    SSG L   +C   +  GC+ GCC++ FCI
Sbjct: 101 CSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCI 140

>Y562_PORGI (Q7MWN8) Hypothetical transport protein PG0562|
          Length = 558

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 200 TNVAVVLSLVVGMGLQYSQLKISELSCYLLFPVPVG 93
           T   ++LSLV  +GLQ  +L+I  +S  + F   VG
Sbjct: 18  TQTIIILSLVCALGLQLGKLRIGTISLGITFVFFVG 53

>LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor homolog (LPS-induced TNF-alpha factor homolog)
          Length = 148

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = -1

Query: 384 PCSHCCLSPSVV-------SSGYLPLHACKYGSECGCLSGCCVV-FCIVGRPVTDG*VPC 229
           P   CC S + +       SSG L   +C      GC+ GCC++ FCI      D   P 
Sbjct: 78  PVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPN 137

Query: 228 LVVLIG 211
              L+G
Sbjct: 138 CHALLG 143

>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated|
           protein 5.10) (Ultrahigh sulfur keratin-associated
           protein 5.10)
          Length = 202

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 315 YGSECG-CLSGCCVVFCIVGRPVTDG*VPCLVVLIGYCLH*CRCSTFPSC 169
           YGS CG C S CCV  C   +PV              C+  C CS+  SC
Sbjct: 31  YGSGCGGCGSSCCVPVCCC-KPVC------------CCVPACSCSSCGSC 67

>LITAF_MOUSE (Q9JLJ0) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor homolog (LPS-induced TNF-alpha factor homolog)
           (LITAF-like protein) (NEDD4 WW domain-binding protein 3)
           (Estrogen-enhanced transcript protein) (mEET)
          Length = 161

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -1

Query: 435 FHTRPTSILSSNE*NIGPCSHCCLSPSVVSSGYLPLHACKYGSEC--GCLSGCCVV-FCI 265
           F+ RP  +   +      CS   ++    ++G L   +C  GS C  GC++GCC + FC+
Sbjct: 87  FYDRPVQMCCPS------CSKMIVTQLSYNAGALTWLSC--GSLCLLGCVAGCCFIPFCV 138

Query: 264 VGRPVTDG*VPCLVVLIG 211
                 D   P    L+G
Sbjct: 139 DALQDVDHYCPNCKALLG 156

>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -1

Query: 369 CLSPSVVSSGYLPLHA-CKYGSECGCLSGCCVVFCIV 262
           C +PSV   G  P H  C+   EC CL G     C V
Sbjct: 212 CEAPSVCRPGCSPEHGYCEEPDECRCLEGWTGPLCTV 248

>MT_ARIAR (P55946) Metallothionein (MT)|
          Length = 66

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -1

Query: 321 CKYGSECGCLSGCCVVFCIVGRPVTDG*VPCLVVLIGYCLH*CRCSTFPSCR 166
           C+ GS+C C  GC    C      +DG   C     G     C+C++  SC+
Sbjct: 18  CQCGSKCQCGEGCACASCKTCNCTSDG-CKCGKECTGAAS--CKCNSSCSCK 66

>LITAF_HUMAN (Q99732) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor (LPS-induced TNF-alpha factor) (p53-induced
           protein 7) (Small integral membrane protein of
           lysosome/late endosome)
          Length = 161

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -1

Query: 381 CSHCCLSPSVVSSGYLPLHACKYGSEC--GCLSGCCVV-FCIVGRPVTDG*VPCLVVLIG 211
           C+   +S    ++G L   +C  GS C  GC++GCC + FC+      D   P    L+G
Sbjct: 99  CNKMIVSQLSYNAGALTWLSC--GSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLG 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,951,616
Number of Sequences: 219361
Number of extensions: 1485739
Number of successful extensions: 3530
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3514
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)