ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet69h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PANE_SHIFL (P0A9J5) 2-dehydropantoate 2-reductase (EC 1.1.1.169)... 28 8.8
2PANE_ECOLI (P0A9J4) 2-dehydropantoate 2-reductase (EC 1.1.1.169)... 28 8.8
3PANE_ECO57 (Q8XE72) 2-dehydropantoate 2-reductase (EC 1.1.1.169)... 28 8.8

>PANE_SHIFL (P0A9J5) 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate|
           reductase) (KPA reductase) (KPR)
          Length = 303

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +3

Query: 69  KASLRRRAGMTCIIKRQTNT*RHSGGHARAHPGNCMKTCTTTRAWMDLFSHRRS 230
           +A L R+  + C+I   T       G  R HP   M+ C    A ++   H  S
Sbjct: 170 RAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTS 223



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>PANE_ECOLI (P0A9J4) 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate|
           reductase) (KPA reductase) (KPR)
          Length = 303

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +3

Query: 69  KASLRRRAGMTCIIKRQTNT*RHSGGHARAHPGNCMKTCTTTRAWMDLFSHRRS 230
           +A L R+  + C+I   T       G  R HP   M+ C    A ++   H  S
Sbjct: 170 RAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTS 223



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>PANE_ECO57 (Q8XE72) 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate|
           reductase) (KPA reductase) (KPR)
          Length = 303

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +3

Query: 69  KASLRRRAGMTCIIKRQTNT*RHSGGHARAHPGNCMKTCTTTRAWMDLFSHRRS 230
           +A L R+  + C+I   T       G  R HP   M+ C    A ++   H  S
Sbjct: 170 RAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTS 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,729,123
Number of Sequences: 219361
Number of extensions: 698940
Number of successful extensions: 1566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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