| Clone Name | rbaet69g12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 347 bits (175), Expect = 8e-93 Identities = 175/175 (100%) Strand = Plus / Minus Query: 36 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 961 Query: 96 cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 901 Query: 156 ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggac 210 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggac 846
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 63.9 bits (32), Expect = 2e-07 Identities = 66/76 (86%), Gaps = 6/76 (7%) Strand = Plus / Minus Query: 3 aactcaactgaacttgaaattactcgggcgga-----cgaattcacaggttttacacaag 57 ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||| Sbjct: 1101 aactcaactcaacttgaaattactcgggcgggacgggcgaattcacag-ttttacagaag 1043 Query: 58 caaattgacagggtcg 73 ||||||||||| |||| Sbjct: 1042 caaattgacagtgtcg 1027 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 aagcaaacttaaacgactcatg 169 |||||||||||||||||||||| Sbjct: 977 aagcaaacttaaacgactcatg 956
>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete sequence Length = 153947 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 attcattcattcaaagcaaa 154 |||||||||||||||||||| Sbjct: 143356 attcattcattcaaagcaaa 143337
>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence Length = 154859 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gatggattcattcattcaaa 149 |||||||||||||||||||| Sbjct: 68036 gatggattcattcattcaaa 68017
>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33 Contains 3' end of the DAB1 gene for disabled homolog 1 (Drosophila), a novel gene and the 5' end of a novel gene, complete sequence Length = 60856 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gatggattcattcattcaaa 149 |||||||||||||||||||| Sbjct: 53885 gatggattcattcattcaaa 53904
>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17, complete sequence Length = 141987 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gggatggattcattcattca 147 |||||||||||||||||||| Sbjct: 10001 gggatggattcattcattca 10020
>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence Length = 177355 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aatgggatggattcattcattcaa 148 |||||||| ||||||||||||||| Sbjct: 47407 aatgggattgattcattcattcaa 47384
>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aatgggatggattcattcattcaa 148 |||||||| ||||||||||||||| Sbjct: 31404 aatgggattgattcattcattcaa 31381
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aactgaacttgaaattactc 27 |||||||||||||||||||| Sbjct: 98129 aactgaacttgaaattactc 98148
>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 aatgggatggattcattcattcaa 148 |||||||| ||||||||||||||| Sbjct: 146597 aatgggattgattcattcattcaa 146620
>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence Length = 132353 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aatgggatggattcattcattcaa 148 |||||||| ||||||||||||||| Sbjct: 74998 aatgggattgattcattcattcaa 74975
>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence Length = 194754 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 aatgggatggattcattcattcaa 148 |||||||| ||||||||||||||| Sbjct: 116188 aatgggattgattcattcattcaa 116211
>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence Length = 215303 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aactcaactgaacttgaaat 22 |||||||||||||||||||| Sbjct: 198046 aactcaactgaacttgaaat 198065
>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete sequence Length = 100090 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 attcattcattcaaagcaaa 154 |||||||||||||||||||| Sbjct: 53765 attcattcattcaaagcaaa 53784 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,941,260 Number of Sequences: 3902068 Number of extensions: 1941260 Number of successful extensions: 294821 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 294747 Number of HSP's gapped (non-prelim): 74 length of query: 210 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 188 effective length of database: 17,147,199,772 effective search space: 3223673557136 effective search space used: 3223673557136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)