| Clone Name | rbaet69g08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 240 bits (121), Expect = 3e-60 Identities = 204/233 (87%), Gaps = 9/233 (3%) Strand = Plus / Minus Query: 160 ggggactacatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcag 219 |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 932 ggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcag 873 Query: 220 tagttatagatcatgtagttgctctgcacccaccgcatccgctgctgccgtgtcaggtcc 279 ||||| ||||||||||| |||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 872 tagttgtagatcatgtaattgctctgtacccaccgcatccgctgctgcagcgtcaggtcc 813 Query: 280 agctcctgattgtaccattcgccggccgcgccg---------gtgccgggggcgacgtcc 330 |||||||| |||||||| ||||||||||||||| ||||| ||||| | ||| Sbjct: 812 agctcctggttgtaccactcgccggccgcgccggaagcgcccgtgcccggggccgcttcc 753 Query: 331 gtgccgacgctggcgccgcagcgaggccgcccgcccgcggtcaccacgcacgc 383 ||||| | ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 752 gtgcccatgctggcgccgcagcgcggccggccgcccgcggtcaccacgcacgc 700 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 atacagacacccccatcttccctat 74 |||||||| |||||||||||||||| Sbjct: 1026 atacagacgcccccatcttccctat 1002
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 190 bits (96), Expect = 2e-45 Identities = 170/196 (86%), Gaps = 9/196 (4%) Strand = Plus / Plus Query: 167 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 226 |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| | Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 28773127 Query: 227 agatcatgtagttgctctgcacccaccgcatccgctgctgccgtgtcaggtccagctcct 286 |||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 28773128 agatcatgtacttgctctgcacccaccgcatccgctgctgccgcgtgaggtcgagctcct 28773187 Query: 287 gattgtaccattcgccggccg---------cgccggtgccgggggcgacgtccgtgccga 337 | ||||||||| | ||||| | ||||||||||||| ||| |||| ||||||| Sbjct: 28773188 ggttgtaccatccaccggcggcggcggcggcgccggtgccgggtgcggcgtcggtgccga 28773247 Query: 338 cgctggcgccgcagcg 353 || ||||||||||||| Sbjct: 28773248 cggtggcgccgcagcg 28773263 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 28750683 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 28750624 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 28750623 gaacttcctctgcacccacc 28750604 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 210 gtcggtgcagtagttatagatcatgtagttgctctgcacc 249 ||||| |||||| || ||||||||||||| ||||||||| Sbjct: 28762663 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 28762624
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 190 bits (96), Expect = 2e-45 Identities = 170/196 (86%), Gaps = 9/196 (4%) Strand = Plus / Plus Query: 167 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 226 |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| | Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 80902 Query: 227 agatcatgtagttgctctgcacccaccgcatccgctgctgccgtgtcaggtccagctcct 286 |||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 80903 agatcatgtacttgctctgcacccaccgcatccgctgctgccgcgtgaggtcgagctcct 80962 Query: 287 gattgtaccattcgccggccg---------cgccggtgccgggggcgacgtccgtgccga 337 | ||||||||| | ||||| | ||||||||||||| ||| |||| ||||||| Sbjct: 80963 ggttgtaccatccaccggcggcggcggcggcgccggtgccgggtgcggcgtcggtgccga 81022 Query: 338 cgctggcgccgcagcg 353 || ||||||||||||| Sbjct: 81023 cggtggcgccgcagcg 81038 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 58458 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 58399 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 58398 gaacttcctctgcacccacc 58379 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 210 gtcggtgcagtagttatagatcatgtagttgctctgcacc 249 ||||| |||||| || ||||||||||||| ||||||||| Sbjct: 70438 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 70399
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 190 bits (96), Expect = 2e-45 Identities = 170/196 (86%), Gaps = 9/196 (4%) Strand = Plus / Minus Query: 167 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 226 |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| | Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 930 Query: 227 agatcatgtagttgctctgcacccaccgcatccgctgctgccgtgtcaggtccagctcct 286 |||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 929 agatcatgtacttgctctgcacccaccgcatccgctgctgccgcgtgaggtcgagctcct 870 Query: 287 gattgtaccattcgccggccg---------cgccggtgccgggggcgacgtccgtgccga 337 | ||||||||| | ||||| | ||||||||||||| ||| |||| ||||||| Sbjct: 869 ggttgtaccatccaccggcggcggcggcggcgccggtgccgggtgcggcgtcggtgccga 810 Query: 338 cgctggcgccgcagcg 353 || ||||||||||||| Sbjct: 809 cggtggcgccgcagcg 794
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 131 bits (66), Expect = 2e-27 Identities = 121/138 (87%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 168 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 227 |||||||||||||||||||| ||| || | | ||||||||||||||||||||||| || Sbjct: 1027 catggagcactcggcggggaggcc-tgctggtagcgcttggggtcggtgcagtagttgta 969 Query: 228 gatcatgtagttgctctgcacccaccgcatccgctgctgccgtgtcaggtccagctcctg 287 ||||||||| |||| ||||||||| ||||||||||||||| | || |||||||||||||| Sbjct: 968 gatcatgtacttgcgctgcacccagcgcatccgctgctgcagggtgaggtccagctcctg 909 Query: 288 attgtaccattcgccggc 305 |||||||| || ||||| Sbjct: 908 gttgtaccagtccccggc 891 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 331 gtgccgacgctggcgccgcagcgaggccgcccgcccgcg 369 ||||||||| ||||||||||||| | ||| ||||||||| Sbjct: 856 gtgccgacggtggcgccgcagcgggtccggccgcccgcg 818
>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to marker R11, genomic sequence Length = 224 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 167 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 226 |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| | Sbjct: 82 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 23 Query: 227 agatcatgtagttgctctgcac 248 |||||||||| ||||||||||| Sbjct: 22 agatcatgtacttgctctgcac 1
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 |||||||||||| |||||||| || | ||||||||||||||||||||||| |||||||| Sbjct: 958 gcactcggcgggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 899 Query: 234 gtagttgctctgcacccaccgcat 257 | | || ||||||||||||||||| Sbjct: 898 gaacttcctctgcacccaccgcat 875
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 87.7 bits (44), Expect = 2e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||| || |||||||| || | ||||||||||||||||||||||| |||||||| Sbjct: 855 gcactcggcaggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 796 Query: 234 gtagttgctctgcacccaccgcat 257 | | || ||||||||||||||||| Sbjct: 795 gaacttcctctgcacccaccgcat 772
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 |||||||||||||| ||||| || | ||||||||||||||||||||||| |||||||| Sbjct: 975 gcactcggcggggaggccctctgctacgcgcttggggtcggtgcagtagttgtagatcat 916 Query: 234 gtagttgctctgcacccaccgcat 257 | | || ||||||||||| ||||| Sbjct: 915 gaacttcctctgcacccagcgcat 892
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 |||||||||||| |||||||| | ||| ||||||| ||||| ||||||||| |||||||| Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcggcgcagtagttgtagatcat 936 Query: 234 gtagttgctctgcacccaccgcat 257 | | |||| ||||||||| ||||| Sbjct: 935 gaacttgcgctgcacccagcgcat 912
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 795 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 736 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 735 gaacttcctctgcacccacc 716
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 151249 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 151190 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 151189 gaacttcctctgcacccacc 151170 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 210 gtcggtgcagtagttatagatcatgtagttgctctgcacc 249 ||||| |||||| || ||||||||||||| ||||||||| Sbjct: 163229 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 163190
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 915 gaacttcctctgcacccacc 896
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 915 gaacttcctctgcacccacc 896
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 174 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 233 ||||||||||||| |||||| | ||| ||||||| ||| ||||||||||| |||||||| Sbjct: 401 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 342 Query: 234 gtagttgctctgcacccacc 253 | | || ||||||||||||| Sbjct: 341 gaacttcctctgcacccacc 322
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 189 gccctgagcgaaacgcttggggtcggtgcagtagttatagatcatgtagttgctctgcac 248 |||||| | ||| ||||||| ||||||||||||||| ||||||||| | || |||||||| Sbjct: 250 gccctgcgggaaccgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcac 309 Query: 249 ccaccgcat 257 ||| ||||| Sbjct: 310 ccagcgcat 318
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 202 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccaccgcat 257 ||||||| ||||||||||||||| ||||||||| | || ||||||||||| ||||| Sbjct: 941 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcat 886
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 214 gtgcagtagttatagatcatgtagttgctctgcacccaccgcatccgct 262 ||||||||||| |||||||||| ||||| ||||||||| ||||| |||| Sbjct: 1061 gtgcagtagttgtagatcatgtggttgcgctgcacccagcgcatgcgct 1013
>ref|NM_125137.2| Arabidopsis thaliana TCH4 (TOUCH 4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G57560 (TCH4) mRNA, complete cds Length = 1067 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
>gb|AF446881.1|AF446881 Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds Length = 855 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
>gb|AY055102.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds Length = 855 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
>dbj|AK220646.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-63-O10 Length = 607 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 88 ttatagatcatgtagttcctctgcaccca 116
>gb|AY052712.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds Length = 1061 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
>gb|AF367262.1|AF367262 Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds Length = 994 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 38298 ttatagatcatgtagttcctctgcaccca 38326 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 36051 tagttatagatcatgtacttcctctgcacc 36080
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 145 ttatagatcatgtagttcctctgcaccca 117 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 2392 tagttatagatcatgtacttcctctgcacc 2363
>gb|AF051338.1|AF051338 Arabidopsis thaliana xyloglucan endotransglycosylase related protein (TCH4) mRNA, complete cds Length = 1016 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
>gb|U27609.1|ATU27609 Arabidopsis thaliana xyloglucan endo-transglycosylase (TCH4) gene, complete cds Length = 1141 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 223 ttatagatcatgtagttgctctgcaccca 251 ||||||||||||||||| ||||||||||| Sbjct: 928 ttatagatcatgtagttcctctgcaccca 900
>emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan endotransglycosylase 1 Length = 1223 Score = 46.1 bits (23), Expect = 0.083 Identities = 44/51 (86%) Strand = Plus / Minus Query: 202 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccac 252 ||||||| ||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 873 cgcttggtgtctgtgcaatagttataaatcatgtaatttttctgcacccac 823
>gb|DQ100340.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH4) mRNA, partial cds Length = 608 Score = 46.1 bits (23), Expect = 0.083 Identities = 44/51 (86%) Strand = Plus / Minus Query: 202 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccac 252 ||||||| ||||| ||||||||| || |||||||| || ||||||||||| Sbjct: 397 cgcttggtgtcggcgcagtagttgtatatcatgtaattcttctgcacccac 347
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 211 tcggtgcagtagttatagatcatgtag 237 |||||||||||||| |||||||||||| Sbjct: 901 tcggtgcagtagttgtagatcatgtag 875
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 211 tcggtgcagtagttatagatcatgtag 237 |||||||||||||| |||||||||||| Sbjct: 916 tcggtgcagtagttgtagatcatgtag 890
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 211 tcggtgcagtagttatagatcatgtag 237 |||||||||||||| |||||||||||| Sbjct: 908 tcggtgcagtagttgtagatcatgtag 882
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 837 tagttatagatcatgtacttcctctgcacc 808
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 ggggtcggtgcagtagttatagatcatgta 236 ||||||| |||||||||| ||||||||||| Sbjct: 837 ggggtcgttgcagtagttgtagatcatgta 808
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ccgctgctgccgtgtcaggtcc 279 |||||||||||||||||||||| Sbjct: 29604 ccgctgctgccgtgtcaggtcc 29583
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 800 tagttatagatcatgtacttcctctgcacc 771
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 207 ggggtcggtgcagtagttatagatcatgta 236 ||||||| |||||||||| ||||||||||| Sbjct: 141156 ggggtcgttgcagtagttgtagatcatgta 141185 Score = 42.1 bits (21), Expect = 1.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 168 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 227 |||||||||||||| |||| |||||| | ||| |||||| ||||| |||||||| || Sbjct: 149761 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 149820 Query: 228 gatcatgtagttg 240 | |||||||||| Sbjct: 149821 caccatgtagttg 149833
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 837 tagttatagatcatgtacttcctctgcacc 808
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 207 ggggtcggtgcagtagttatagatcatgta 236 ||||||| |||||||||| ||||||||||| Sbjct: 30507779 ggggtcgttgcagtagttgtagatcatgta 30507808 Score = 42.1 bits (21), Expect = 1.3 Identities = 60/73 (82%) Strand = Plus / Plus Query: 168 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 227 |||||||||||||| |||| |||||| | ||| |||||| ||||| |||||||| || Sbjct: 30516384 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 30516443 Query: 228 gatcatgtagttg 240 | |||||||||| Sbjct: 30516444 caccatgtagttg 30516456
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 ggggtcggtgcagtagttatagatcatgta 236 ||||||| |||||||||| ||||||||||| Sbjct: 900 ggggtcgttgcagtagttgtagatcatgta 871
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcacc 249 ||||||||||||||||| || ||||||||| Sbjct: 779 tagttatagatcatgtacttcctctgcacc 750
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 905 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 846 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 845 tgtagttgc 837
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 910 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 851 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 850 tgtagttgc 842
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 227 |||||||||||||| |||| |||||| | ||| |||||| ||||| |||||||| || Sbjct: 816 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 757 Query: 228 gatcatgtagttg 240 | |||||||||| Sbjct: 756 caccatgtagttg 744
>gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase mRNA, partial cds Length = 494 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 tcggtgcagtagttatagatcatgt 235 |||||||||||||| |||||||||| Sbjct: 494 tcggtgcagtagttgtagatcatgt 470
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gccgcgccggtgccgggggcg 324 ||||||||||||||||||||| Sbjct: 2332673 gccgcgccggtgccgggggcg 2332653
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ccgcgccggtgccgggggcga 325 ||||||||||||||||||||| Sbjct: 2518373 ccgcgccggtgccgggggcga 2518353
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 gttgctctgcacccaccgcat 257 ||||||||||||||||||||| Sbjct: 4951257 gttgctctgcacccaccgcat 4951237 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gtccagctcctgattgtacc 295 |||||||||||||||||||| Sbjct: 19708356 gtccagctcctgattgtacc 19708375
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 8322676 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 8322617 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 8322616 tgtagttgc 8322608
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 tagttatagatcatgtagttgctctgcac 248 ||||||||||||||||| || |||||||| Sbjct: 814 tagttatagatcatgtacttcctctgcac 786
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 cgccggccgcgccggtgccgggggcgacg 327 |||||||||||||| | |||||||||||| Sbjct: 3072055 cgccggccgcgccgctcccgggggcgacg 3072083 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 1843086 gccggccgcgccggtgccgg 1843105
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 901 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 842 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 841 tgtagttgc 833
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 gttgctctgcacccaccgcat 257 ||||||||||||||||||||| Sbjct: 133789 gttgctctgcacccaccgcat 133769
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 62785 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 62726 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 62725 tgtagttgc 62717
>dbj|AB046702.2| Aspergillus awamori AwabfA gene for alpha-L-arabinofuranosidase A, complete cds Length = 3291 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cccaccgcatccgctgctgcc 268 ||||||||||||||||||||| Sbjct: 771 cccaccgcatccgctgctgcc 791
>dbj|AB085903.1| Aspergillus kawachii AkabfA gene for alpha-L-arabinofuranosidase A, complete cds Length = 3420 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cccaccgcatccgctgctgcc 268 ||||||||||||||||||||| Sbjct: 603 cccaccgcatccgctgctgcc 623
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 910 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 851 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 850 tgtagttgc 842
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 227 |||||||||||||| |||| |||||| | ||| |||||| ||||| |||||||| || Sbjct: 906 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 847 Query: 228 gatcatgtagttg 240 | |||||||||| Sbjct: 846 caccatgtagttg 834
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 173 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 232 ||||||||||||||| |||||| | ||| ||| | ||||| ||||||||| ||| || Sbjct: 905 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 846 Query: 233 tgtagttgc 241 ||||||||| Sbjct: 845 tgtagttgc 837
>ref|XM_475840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 76 gccggccgcgccggtgccgg 95
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ggagcactcggcggggacgccctg 194 ||||||||||||||||| |||||| Sbjct: 503 ggagcactcggcggggaagccctg 480
>ref|XM_367625.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07536.4) partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gtgccgacgctggcgccgca 350 |||||||||||||||||||| Sbjct: 889 gtgccgacgctggcgccgca 908
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gtccagctcctgattgtacc 295 |||||||||||||||||||| Sbjct: 35623 gtccagctcctgattgtacc 35642
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gcgacgtccgtgccgacgctggcg 345 |||||| ||||||||||||||||| Sbjct: 65348 gcgacgcccgtgccgacgctggcg 65371
>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence Length = 209259 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 actaatcattattgatttcc 40 |||||||||||||||||||| Sbjct: 129064 actaatcattattgatttcc 129045
>gb|CP000322.1| Nitrobacter hamburgensis X14 plasmid 3, complete sequence Length = 121408 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 cgacgtccgtgccgacgctggcgc 346 |||||||||||||| ||||||||| Sbjct: 104251 cgacgtccgtgccggcgctggcgc 104228
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ttcgccggccgcgccggtgccggg 320 ||||||||||||||||||| |||| Sbjct: 249948 ttcgccggccgcgccggtgtcggg 249925
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ttcgccggccgcgccggtgccggg 320 ||||||||||| |||||||||||| Sbjct: 4770099 ttcgccggccgagccggtgccggg 4770076
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 cggtgccgggggcgacgtccgtgc 334 ||||||||||||||| |||||||| Sbjct: 2309076 cggtgccgggggcgatgtccgtgc 2309099
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 12007 gccggccgcgccggtgccgg 11988
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cgacgtccgtgccgacgctg 342 |||||||||||||||||||| Sbjct: 103892 cgacgtccgtgccgacgctg 103911
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 37848 gccggccgcgccggtgccgg 37829
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence Length = 195538 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 agacacccccatcttcccta 73 |||||||||||||||||||| Sbjct: 74787 agacacccccatcttcccta 74768
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagtgcaatgctagcagctg 130 |||||||||||||||||||| Sbjct: 108572 cagtgcaatgctagcagctg 108591
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctgctgccgtgtcaggtcca 280 |||||||||||||||||||| Sbjct: 3513249 ctgctgccgtgtcaggtcca 3513268
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 tcgccggccgcgccggtgccgggg 321 |||||||||| ||||||||||||| Sbjct: 5047595 tcgccggccgagccggtgccgggg 5047572
>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete sequence Length = 166821 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gggactacatggagcactcg 180 |||||||||||||||||||| Sbjct: 22059 gggactacatggagcactcg 22040
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 27005425 gccggccgcgccggtgccgg 27005406
>gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 of the complete genome Length = 10871 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gctggcgccgcagcgaggcc 358 |||||||||||||||||||| Sbjct: 3097 gctggcgccgcagcgaggcc 3078
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gtccagctcctgattgtacc 295 |||||||||||||||||||| Sbjct: 54042 gtccagctcctgattgtacc 54061
>dbj|AB113109.1| Aotus trivirgatus Aotr-B1 gene for MHC class I antigen, partial cds and promoter region Length = 3861 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 catggggactacatggagcactcg 180 |||||||||| ||||||||||||| Sbjct: 2660 catggggactgcatggagcactcg 2683
>dbj|AK106673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A03, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gtccagctcctgattgtacc 295 |||||||||||||||||||| Sbjct: 809 gtccagctcctgattgtacc 828
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 210 gtcggtgcagtagttatagatcatgtagttgctctgcacc 249 ||||| |||||| || ||||||||||||| ||||||||| Sbjct: 895 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 856
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 127823 gccggccgcgccggtgccgg 127842
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 1031229 gccggccgcgccggtgccgg 1031210 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 300 gccggccgcgccggtgccgggggcgacgtccgtgcc 335 |||||||||||||||| ||| ||| |||||||||| Sbjct: 968330 gccggccgcgccggtggcggaagcggcgtccgtgcc 968365
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ggagcactcggcggggacgccctg 194 ||||||||||||||||| |||||| Sbjct: 981 ggagcactcggcggggaagccctg 958
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggccgcgccggtgccgg 319 |||||||||||||||||||| Sbjct: 127823 gccggccgcgccggtgccgg 127842
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108, complete sequence Length = 117124 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tgcagtagttatagatcatg 234 |||||||||||||||||||| Sbjct: 90697 tgcagtagttatagatcatg 90716
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 cgccggccgcgccggtgccggggg 322 |||||| ||||||||||||||||| Sbjct: 1199116 cgccgggcgcgccggtgccggggg 1199139
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tgcagtagttatagatcatg 234 |||||||||||||||||||| Sbjct: 828 tgcagtagttatagatcatg 809 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,661,152 Number of Sequences: 3902068 Number of extensions: 2661152 Number of successful extensions: 47907 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 46822 Number of HSP's gapped (non-prelim): 1086 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)