>Y257_SYNY3 (P74415) Hypothetical UPF0079 protein sll0257|
          Length = 157

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +2

Query: 17  LLGTCTIAQFLLLNLHARQQEELFH-DKFRVNRTYIHTFPPEYYTQGKHFPYSTCSI--- 184
           + G      F ++N +   +  L+H D +R+N   +    PE Y QG+ FP    ++   
Sbjct: 56  ITGEIVSPTFTIVNEYREGKMPLYHLDLYRLNTLEVEYLYPEQYWQGEDFPLGITAVEWP 115

Query: 185 RRLP 196
            RLP
Sbjct: 116 ERLP 119

>SP3_MOUSE (O70494) Transcription factor Sp3|
          Length = 783

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 72  SKRSFFMTSSELTGHTYTHSHQSIIHKENTFL 167
           SKR  FM S  L  H  TH ++ +IH  +T L
Sbjct: 689 SKR--FMRSDHLAKHIKTHQNKKVIHSSSTVL 718

>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 380

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 172 NMQYKKITVLQN---DPSQGNEPTFMPFVRAIAFSSSDTELSSMTK 300
           N  +K+   L+    DP +G  PTF PF R+I   S+D +L   ++
Sbjct: 83  NSGFKRSRTLEGKLKDPEKGPVPTFQPFQRSI---SADDDLQESSR 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,334,909
Number of Sequences: 219361
Number of extensions: 1281219
Number of successful extensions: 3436
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3436
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)