ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet69d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L... 456 e-125
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
3dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
4dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
5dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
6dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 137 2e-29
8emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 137 2e-29
9emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 137 2e-29
10dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 4e-27
11gb|AY103985.1| Zea mays PCO103239 mRNA sequence 111 1e-21
12emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment ... 78 1e-11
13dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds 56 5e-05
14dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mR... 56 5e-05
15emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photo... 50 0.003
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
17emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4,... 44 0.19
18emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4,... 44 0.19
19gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 42 0.75
20gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete se... 42 0.75
21gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosom... 40 2.9
22gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome... 40 2.9
23gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complet... 40 2.9
24emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13... 40 2.9
25gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 2.9
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
27dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
28gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 40 2.9
29emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on ch... 40 2.9 
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds
          Length = 777

 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccaccgagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 atgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccaccgagaa 711

                                                                       
Query: 61  gagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttgaagaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttgaagaag 651

                                                                       
Query: 121 tatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatacaccgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatacaccgccg 591

                                                             
Query: 181 aagaagaagcctccggtgaactgcgaccacccttcggcggtctggagctt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagaagaagcctccggtgaactgcgaccacccttcggcggtctggagctt 541
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                            
Query: 106      atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 13161383 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13161324

                                                                            
Query: 166      ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
                ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 13161323 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13161264

                     
Query: 226      agctt 230
                |||||
Sbjct: 13161263 agctt 13161259
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>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full
           insert sequence
          Length = 923

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690

                                                                       
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630

                
Query: 226 agctt 230
           |||||
Sbjct: 629 agctt 625
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>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full
           insert sequence
          Length = 932

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 699 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 640

                                                                       
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 639 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 580

                
Query: 226 agctt 230
           |||||
Sbjct: 579 agctt 575
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>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full
           insert sequence
          Length = 985

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 721 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 662

                                                                       
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 661 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 602

                
Query: 226 agctt 230
           |||||
Sbjct: 601 agctt 597
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>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full
           insert sequence
          Length = 923

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690

                                                                       
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630

                
Query: 226 agctt 230
           |||||
Sbjct: 629 agctt 625
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                            
Query: 106      atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 13115658 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13115599

                                                                            
Query: 166      ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
                ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 13115598 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13115539

                     
Query: 226      agctt 230
                |||||
Sbjct: 13115538 agctt 13115534
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Plus

                                                                          
Query: 106    atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
              ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 169359 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 169418

                                                                          
Query: 166    ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
              ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 169419 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 169478

                   
Query: 226    agctt 230
              |||||
Sbjct: 169479 agctt 169483
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178827

 Score =  137 bits (69), Expect = 2e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                          
Query: 106    atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
              ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 150586 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 150527

                                                                          
Query: 166    ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
              ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 150526 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 150467

                   
Query: 226    agctt 230
              |||||
Sbjct: 150466 agctt 150462
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>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full
           insert sequence
          Length = 964

 Score =  129 bits (65), Expect = 4e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 165
           ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | ||
Sbjct: 704 atctacttgaagaagtacgggagatcgagcacgtagaggaggaagtaggcccagaggacg 645

                                                                       
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 225
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 644 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 585

                
Query: 226 agctt 230
           |||||
Sbjct: 584 agctt 580
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>gb|AY103985.1| Zea mays PCO103239 mRNA sequence
          Length = 1657

 Score =  111 bits (56), Expect = 1e-21
 Identities = 107/124 (86%)
 Strand = Plus / Minus

                                                                        
Query: 107  tctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgc 166
            |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||   |||
Sbjct: 1499 tctacttgaagaagtaggggaggtcgagcacgtagaggagaaagtaggcccagagcacgc 1440

                                                                        
Query: 167  cggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgga 226
            |||| |  |||||||||||||| || ||||||||||  | ||| || ||||||||||| |
Sbjct: 1439 cggagatgccgccgaagaagaaccccccggtgaacttggcccagccgtcggcggtctgca 1380

                
Query: 227  gctt 230
            ||||
Sbjct: 1379 gctt 1376
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>emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment 08RG108F
          Length = 162

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 107 tctacttgaagaagtatgggaggtcgagc-acgtagaggaggaagtatgcccaga 160
           |||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct: 109 tctacttgaagaagtacgggaggtcgagctacgtagaggaggaagtaggcccaga 55
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>dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds
          Length = 812

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 105 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 160
           ||||||||||| | |||| |||||||| |  || ||||||||||||||||||||||
Sbjct: 737 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 682
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>dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mRNA for subunit of
           photosystem I, complete cds
          Length = 811

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 105 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 160
           ||||||||||| | |||| |||||||| |  || ||||||||||||||||||||||
Sbjct: 674 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 619
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>emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photosystem I reaction
           center
          Length = 834

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 166 ccggatacaccgccgaagaagaagcctccggtgaact 202
           ||||| ||||| ||||||||||| |||||||||||||
Sbjct: 676 ccggaaacaccaccgaagaagaaccctccggtgaact 640
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 16      aaattcatttatacatagaaga 37
               ||||||||||||||||||||||
Sbjct: 5987801 aaattcatttatacatagaaga 5987780
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>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13,
             complete sequence
          Length = 137572

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 16    aaattcatttatacatagaaga 37
             ||||||||||||||||||||||
Sbjct: 11198 aaattcatttatacatagaaga 11177
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>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
              complete sequence
          Length = 137981

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 16     aaattcatttatacatagaaga 37
              ||||||||||||||||||||||
Sbjct: 131038 aaattcatttatacatagaaga 131017
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     atatgtaaaaattcatttata 28
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394
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>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence
          Length = 140426

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     atatgtaaaaattcatttata 28
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394
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>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     taaaaattcatttatacatagaag 36
              ||||||||||||||| ||||||||
Sbjct: 218092 taaaaattcatttatccatagaag 218069
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>gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome 19, complete sequence
          Length = 202236

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    taaaaattcatttatacatagaag 36
             ||||||||||||||| ||||||||
Sbjct: 11868 taaaaattcatttatccatagaag 11845
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>gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complete sequence
          Length = 161199

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    aatctacttgaagaagtatg 124
              ||||||||||||||||||||
Sbjct: 143165 aatctacttgaagaagtatg 143184
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>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the
             3' end of the ACO2 gene for mitochondrial aconitase 2, the
             gene for a novel protein similar to yeast DNA-directed RNA
             Polymerase III 25 kD  Polypeptide, the gene for the human
             ortholog of rat Pippin, the PMM1 gene for
             phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and
             two novel genes. Contains ESTs, STSs, GSSs and  two
             putative CpG islands, complete sequence
          Length = 107818

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   agaggaggaagtatgcccag 159
             ||||||||||||||||||||
Sbjct: 64984 agaggaggaagtatgcccag 65003
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    attaatctacttgaagaagt 121
              ||||||||||||||||||||
Sbjct: 781146 attaatctacttgaagaagt 781165
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        atgaggaatatgtaaaaatt 20
                ||||||||||||||||||||
Sbjct: 24723095 atgaggaatatgtaaaaatt 24723114
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atgaggaatatgtaaaaatt 20
             ||||||||||||||||||||
Sbjct: 91672 atgaggaatatgtaaaaatt 91691
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>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgtacatgcatgccaccta 102
             ||||||||||||||||||||
Sbjct: 81350 tcgtacatgcatgccaccta 81369
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>emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on chromosome 2, complete
              sequence
          Length = 209560

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    aatctacttgaagaagtatg 124
              ||||||||||||||||||||
Sbjct: 121761 aatctacttgaagaagtatg 121780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,065,618
Number of Sequences: 3902068
Number of extensions: 2065618
Number of successful extensions: 36360
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36266
Number of HSP's gapped (non-prelim): 93
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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