ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet69d02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 549 bits (277), Expect = e-153 Identities = 297/306 (97%) Strand = Plus / Minus Query: 3 catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1488 catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 1429 Query: 63 cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1428 cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 1369 Query: 123 ctaaaaaggcgtaaacatgataattaccaaataagtttnnnnnnncgacaagttgagcat 182 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1368 ctaaaaaggcgtaaacatgataattaccaaataagtttaaaaaaacgacaagttgagcat 1309 Query: 183 cggccggcgtcctaaatgcatgcatgcatccatgggatttgcgggggatcatgcgagtcc 242 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1308 cggccggcgtcctagatgcatgcatgcatccatgggatttgcggtggatcatgcgagtcc 1249 Query: 243 gacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1248 gacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 1189 Query: 303 ggagag 308 |||||| Sbjct: 1188 ggagag 1183
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 206 bits (104), Expect = 3e-50 Identities = 141/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 1 gccatcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatct 60 ||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 1474 gccatcctcaatcagacctgcggttttattattc-atggttcgccgaaaattgtacatct 1416 Query: 61 tccacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagc 120 ||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||| Sbjct: 1415 tccacacgagatctacgcactctcgccgacactcgcaaggcctctcccgcgtaattgagt 1356 Query: 121 ttctaaaaaggcgtaaacatgataattaccaa 152 ||||||||||||||||| |||||||||||||| Sbjct: 1355 ttctaaaaaggcgtaaaaatgataattaccaa 1324 Score = 143 bits (72), Expect = 4e-31 Identities = 78/80 (97%) Strand = Plus / Minus Query: 229 gatcatgcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcgggg 288 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1241 gatcaggcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcgggg 1182 Query: 289 tcgctggcctcctgggagag 308 |||||||||||||| ||||| Sbjct: 1181 tcgctggcctcctgtgagag 1162
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 131 bits (66), Expect = 1e-27 Identities = 98/106 (92%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 3 catcctcaatcaggcctgcggttttattattccaatgttt-gccgaaaattgtacatctt 61 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1146 catcctcaattaggcctgcggttttattattccaatggttcgccgaaaattgtacatctt 1087 Query: 62 ccacacgagatctatgcactctcgcggccactcgc-aaggcctctc 106 |||| ||||||||||| |||| ||||| ||||||| |||||||||| Sbjct: 1086 ccacccgagatctatgtactcccgcggacactcgcaaaggcctctc 1041 Score = 125 bits (63), Expect = 9e-26 Identities = 75/79 (94%) Strand = Plus / Minus Query: 230 atcatgcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggt 289 |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 945 atcaggcgagtccgacgagcttctcactgagctcccagaccttgcgcgccttctcggggt 886 Query: 290 cgctggcctcctgggagag 308 ||||||||||||| ||||| Sbjct: 885 cgctggcctcctgagagag 867
>emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 Score = 119 bits (60), Expect = 5e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 229 gatcatgcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcgggg 288 ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| | Sbjct: 1244 gatcatgcgagcccgacgagcttctcgctgagctcccagaccttcctggccttctcggtg 1185 Query: 289 tcgctggcctcctgggagag 308 ||||||||||||| |||||| Sbjct: 1184 tcgctggcctcctcggagag 1165
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 235 gcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctg 294 ||||| |||||||||||||||||||| ||||||| ||| | ||||||||| ||||||||| Sbjct: 97464 gcgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctg 97405 Query: 295 gcctcctgggagag 308 |||||||| ||||| Sbjct: 97404 gcctcctgcgagag 97391
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 235 gcgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctg 294 ||||| |||||||||||||||||||| ||||||| ||| | ||||||||| ||||||||| Sbjct: 42560 gcgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctg 42501 Query: 295 gcctcctgggagag 308 |||||||| ||||| Sbjct: 42500 gcctcctgcgagag 42487
>ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 1159 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 1100 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 1099 cctcctgcgagag 1087
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 5101 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 5042 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 5041 cctcctgcgagag 5029
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 34699539 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 34699480 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 34699479 cctcctgcgagag 34699467
>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full insert sequence Length = 1384 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 1231 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 1172 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 1171 cctcctgcgagag 1159
>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full insert sequence Length = 1384 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 1231 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 1172 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 1171 cctcctgcgagag 1159
>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full insert sequence Length = 1384 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 1231 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 1172 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 1171 cctcctgcgagag 1159
>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full insert sequence Length = 1385 Score = 89.7 bits (45), Expect = 5e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 236 cgagtccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctgg 295 |||| |||||||||||||||||||| ||||||| ||| | ||||||||| |||||||||| Sbjct: 1232 cgaggccgacgagcttctcgctgaggtcccagagcttcctggccttctccgggtcgctgg 1173 Query: 296 cctcctgggagag 308 ||||||| ||||| Sbjct: 1172 cctcctgcgagag 1160
>ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative dehydrogenase (OSJNBa0017E08.8), mRNA Length = 1564 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 |||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 1258 ccgacgagcttctcgctgagctcccagaccttcttggccttctccggatcggaggcctcc 1199 Query: 301 tgggagag 308 | |||||| Sbjct: 1198 tcggagag 1191
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 |||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 119147 ccgacgagcttctcgctgagctcccagaccttcttggccttctccggatcggaggcctcc 119206 Query: 301 tgggagag 308 | |||||| Sbjct: 119207 tcggagag 119214
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 |||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 18387546 ccgacgagcttctcgctgagctcccagaccttcttggccttctccggatcggaggcctcc 18387487 Query: 301 tgggagag 308 | |||||| Sbjct: 18387486 tcggagag 18387479
>dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C06, full insert sequence Length = 2944 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 |||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 2458 ccgacgagcttctcgctgagctcccagaccttcttggccttctccggatcggaggcctcc 2399 Query: 301 tgggagag 308 | |||||| Sbjct: 2398 tcggagag 2391
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 |||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 18397599 ccgacgagcttctcgctgagctcccagaccttcttggccttctccggatcggaggcctcc 18397540 Query: 301 tgggagag 308 | |||||| Sbjct: 18397539 tcggagag 18397532
>gb|AF496797.1| Zea mays cultivar H_3 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 364 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccgggtcgctggcctcctg 137
>emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protochlorophyllide oxidoreductase (por gene) Length = 1116 Score = 65.9 bits (33), Expect = 7e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 ||||||||||||||||||| |||||||| ||| |||||| |||| ||||||||||||| Sbjct: 1106 ccgacgagcttctcgctgatctcccagagcttcttggccttgtcggcgtcgctggcctcc 1047 Query: 301 t 301 | Sbjct: 1046 t 1046
>gb|AY103784.1| Zea mays PCO066646 mRNA sequence Length = 1664 Score = 65.9 bits (33), Expect = 7e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 241 ccgacgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcc 300 ||||||||||||||||||| |||||||| ||| |||||| |||| ||||||||||||| Sbjct: 1288 ccgacgagcttctcgctgatctcccagagcttcttggccttgtcggcgtcgctggcctcc 1229 Query: 301 t 301 | Sbjct: 1228 t 1228
>gb|AF496822.1| Zea mays cultivar C_9 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496821.1| Zea mays cultivar D_9 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 363 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 193 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 135
>gb|AF496820.1| Zea mays cultivar D_6 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496819.1| Zea mays cultivar F_1 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496818.1| Zea mays cultivar Mo17 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496817.1| Zea mays cultivar D_7 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496816.1| Zea mays cultivar TX601 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496815.1| Zea mays cultivar B84 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 352 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 185 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 127
>gb|AF496814.1| Zea mays cultivar H60 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 340 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 170 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 112
>gb|AF496813.1| Zea mays cultivar DE811 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 355 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 185 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 127
>gb|AF496812.1| Zea mays cultivar 684 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496811.1| Zea mays cultivar D71-4HT protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 355 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 185 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 127
>gb|AF496810.1| Zea mays cultivar H99 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 299 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 164 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 106
>gb|AF496809.1| Zea mays cultivar IVANA protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496808.1| Zea mays cultivar CO109 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 361 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 191 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 133
>gb|AF496807.1| Zea mays cultivar I_1 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 356 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 186 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 128
>gb|AF496806.1| Zea mays cultivar B73 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496805.1| Zea mays cultivar F_2 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496804.1| Zea mays cultivar G_1 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 368 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496803.1| Zea mays cultivar B_6 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496802.1| Zea mays cultivar H_4 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496801.1| Zea mays cultivar F_4 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 355 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 185 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 127
>gb|AF496800.1| Zea mays cultivar F_3 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496799.1| Zea mays cultivar F_5 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 363 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 193 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 135
>gb|AF496798.1| Zea mays cultivar H_5 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496796.1| Zea mays cultivar J40 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496795.1| Zea mays cultivar 647 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496794.1| Zea mays cultivar B_1 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496793.1| Zea mays cultivar F_6 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496792.1| Zea mays cultivar C_5 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AF496791.1| Zea mays cultivar H_1 protochlorophyllide reductase precursor-like protein gene, 3'UTR and partial cds Length = 365 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 195 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 137
>gb|AY106314.1| Zea mays PCO151862 mRNA sequence Length = 1009 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 244 acgagcttctcgctgagctcccagaccttgcgggccttctcggggtcgctggcctcctg 302 |||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct: 725 acgagcttctcgctgatctcccagagcttcttggccttctccggatcgctggcctcctg 667
>gb|BT012732.1| Lycopersicon esculentum clone 113661F, mRNA sequence Length = 1610 Score = 46.1 bits (23), Expect = 0.066 Identities = 41/47 (87%) Strand = Plus / Minus Query: 238 agtccgacgagcttctcgctgagctcccagaccttgcgggccttctc 284 ||||| ||||||||||| |||| |||||| | |||||| |||||||| Sbjct: 1277 agtccaacgagcttctcactgacctcccatagcttgcgtgccttctc 1231
>gb|AF243522.1|AF243522 Lycopersicon esculentum light dependent NADH:protochlorophyllide oxidoreductase 2 mRNA, partial cds Length = 1004 Score = 46.1 bits (23), Expect = 0.066 Identities = 41/47 (87%) Strand = Plus / Minus Query: 238 agtccgacgagcttctcgctgagctcccagaccttgcgggccttctc 284 ||||| ||||||||||| |||| |||||| | |||||| |||||||| Sbjct: 839 agtccaacgagcttctcactgacctcccatagcttgcgtgccttctc 793
>gb|AC104358.4| Homo sapiens chromosome 8, clone RP11-151L10, complete sequence Length = 174055 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 atgcatgcatgcatccatggga 219 |||||||||||||||||||||| Sbjct: 139457 atgcatgcatgcatccatggga 139436
>dbj|AP002089.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1100B9 Length = 151959 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 atgcatgcatgcatccatggga 219 |||||||||||||||||||||| Sbjct: 53965 atgcatgcatgcatccatggga 53944
>dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1016F12, complete sequence Length = 200738 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 atgcatgcatgcatccatggga 219 |||||||||||||||||||||| Sbjct: 128594 atgcatgcatgcatccatggga 128573
>gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, complete sequence Length = 193579 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaacatgataattaccaaata 155 ||||||||||||||||||||| Sbjct: 126070 aaacatgataattaccaaata 126050
>gb|AY733961.1| Macaca mulatta isolate rq2277-10p14 MLV-derived vector proviral integration site Length = 362 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 taaatgcatgcatgcatccat 215 ||||||||||||||||||||| Sbjct: 266 taaatgcatgcatgcatccat 246
>gb|AC133169.3| Mus musculus BAC clone RP24-259I15 from 9, complete sequence Length = 163930 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tcctaaatgcatgcatgcatccatg 216 ||||||| ||||||||||||||||| Sbjct: 142851 tcctaaaagcatgcatgcatccatg 142827
>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete sequence Length = 200794 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tcctaaatgcatgcatgcatccatg 216 |||||||||||||||||||| |||| Sbjct: 118465 tcctaaatgcatgcatgcatgcatg 118489
>gb|BC079655.1| Mus musculus cDNA clone IMAGE:6854812 Length = 4411 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 atgcatgcatgcatccatgg 217 |||||||||||||||||||| Sbjct: 1039 atgcatgcatgcatccatgg 1058
>ref|XM_617927.2| PREDICTED: Bos taurus similar to F-box only protein 28, transcript variant 1 (LOC537745), mRNA Length = 2928 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 aatgcatgcatgcatccatg 216 |||||||||||||||||||| Sbjct: 1809 aatgcatgcatgcatccatg 1790
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aaattgtacatcttccacac 67 |||||||||||||||||||| Sbjct: 24311 aaattgtacatcttccacac 24292
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aaatgcatgcatgcatccat 215 |||||||||||||||||||| Sbjct: 82801 aaatgcatgcatgcatccat 82782
>emb|BX950203.15| Zebrafish DNA sequence from clone CH211-108P22, complete sequence Length = 129504 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 aatgcatgcatgcatccatg 216 |||||||||||||||||||| Sbjct: 61533 aatgcatgcatgcatccatg 61552
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gagcttctcgctgagctccc 265 |||||||||||||||||||| Sbjct: 1409370 gagcttctcgctgagctccc 1409389
>gb|AY789611.1| Chrysopogon fulvus voucher PI199241 USDA FL gene, partial cds Length = 947 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 cctaaatgcatgcatgcatccatg 216 ||||||||||||||||||| |||| Sbjct: 476 cctaaatgcatgcatgcatgcatg 499
>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence Length = 176196 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttattattccaatgtttg 43 |||||||||||||||||||| Sbjct: 105180 ttttattattccaatgtttg 105199
>emb|AL669956.10| Mouse DNA sequence from clone RP23-222I1 on chromosome X, complete sequence Length = 199434 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 atgcatgcatgcatccatgg 217 |||||||||||||||||||| Sbjct: 19812 atgcatgcatgcatccatgg 19793
>dbj|AB005556.1| Plectonema boryanum DNA for NADPH:protochlorophyllide oxidoreductase, hypothetical protein, partial and complete cds Length = 2131 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 235 gcgagtccgacgagcttctcgctgagctccca 266 |||||||| |||||||||||||| | |||||| Sbjct: 2030 gcgagtccaacgagcttctcgctcaactccca 1999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,054,422 Number of Sequences: 3902068 Number of extensions: 2054422 Number of successful extensions: 55744 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55512 Number of HSP's gapped (non-prelim): 221 length of query: 308 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 286 effective length of database: 17,147,199,772 effective search space: 4904099134792 effective search space used: 4904099134792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
