| Clone Name | rbaet69c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_424174.1| PREDICTED: Gallus gallus similar to bA6J24.4 (A novel protein similar to cell division cycle control protein 37(CDC37)) (LOC426535), partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 aaagagacgaaaacagcctc 69 |||||||||||||||||||| Sbjct: 1121 aaagagacgaaaacagcctc 1102
>ref|XM_547747.2| PREDICTED: Canis familiaris similar to CG10889-PA (LOC490625), mRNA Length = 7350 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gccatggcaatgccacggca 302 |||||||||||||||||||| Sbjct: 2510 gccatggcaatgccacggca 2491
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgaccccatgacatcactga 98 |||||||||||||||||||| Sbjct: 46296 tgaccccatgacatcactga 46277
>emb|CR352573.1| Gallus gallus finished cDNA, clone ChEST828l18 Length = 853 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 aaagagacgaaaacagcctc 69 |||||||||||||||||||| Sbjct: 755 aaagagacgaaaacagcctc 736
>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete sequence Length = 181773 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccactgacacattattgaag 135 |||||||||||||||||||| Sbjct: 115626 ccactgacacattattgaag 115607
>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence Length = 207184 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 ccaggcaaaggctagctcaggagc 340 |||||| ||||||||||||||||| Sbjct: 167683 ccaggccaaggctagctcaggagc 167706
>emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in linkage group 13, complete sequence Length = 154297 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 acccggaacgccactgacacatta 129 |||||||||||| ||||||||||| Sbjct: 53274 acccggaacgcctctgacacatta 53297
>emb|AL929200.8| Zebrafish DNA sequence from clone CH211-190B21, complete sequence Length = 120682 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cactgacacattattgaagc 136 |||||||||||||||||||| Sbjct: 80020 cactgacacattattgaagc 80039
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cggcacgcgcacggcgaagc 317 |||||||||||||||||||| Sbjct: 27551 cggcacgcgcacggcgaagc 27570
>emb|AL954698.9| Zebrafish DNA sequence from clone CH211-233B16 in linkage group 6, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cactgacacattattgaagc 136 |||||||||||||||||||| Sbjct: 166856 cactgacacattattgaagc 166875
>emb|AL928872.7| Zebrafish DNA sequence from clone DKEYP-59A2, complete sequence Length = 200760 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cactgacacattattgaagc 136 |||||||||||||||||||| Sbjct: 107162 cactgacacattattgaagc 107143 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,914,436 Number of Sequences: 3902068 Number of extensions: 1914436 Number of successful extensions: 30969 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30958 Number of HSP's gapped (non-prelim): 11 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)