>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 293 QAPVQLGSLRAADGKE 246
           QAPVQLGSLRAADGKE
Sbjct: 362 QAPVQLGSLRAADGKE 377

>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 293 QAPVQLGSLRAADGKE 246
           QAPVQLGSLRAADGKE
Sbjct: 363 QAPVQLGSLRAADGKE 378

>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 293 QAPVQLGSLRAADGKE 246
           QAPVQLGSLRAADGKE
Sbjct: 356 QAPVQLGSLRAADGKE 371

>GFRA3_MOUSE (O35118) GDNF family receptor alpha-3 precursor (GFR-alpha-3)|
          Length = 397

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -1

Query: 203 PNCPPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 51
           PNC  + SF          C A P+C S       HCHP  +L +C    S
Sbjct: 243 PNCLDLRSF----------CRADPLCRSRLMDFQTHCHPMDILGTCATEQS 283

>GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR-alpha-3)|
          Length = 400

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -1

Query: 203 PNC--PPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 51
           PNC  PP+       LE    C + P+C S       HCHP  +L +C    S
Sbjct: 237 PNCALPPVAP---NCLELRRLCFSDPLCRSRLVDFQTHCHPMDILGTCATEQS 286

>ALCR_EMENI (P21228) Regulatory protein alcR|
          Length = 821

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 181 PSLRKHLRIAQPALPTPCVIQQILVLLFIVTPIN--YYHRVNRI 56
           P    H +I+QPA   PC  +Q    L   TP+    Y RV ++
Sbjct: 566 PDHESHTQISQPAARWPCTYEQAAAALSSATPVKVLLYRRVTQL 609

>EMR1_MOUSE (Q61549) EGF-like module-containing mucin-like hormone|
           receptor-like 1 precursor (Cell surface glycoprotein
           EMR1) (EMR1 hormone receptor) (Cell surface glycoprotein
           F4/80)
          Length = 931

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 126 THGVGRAGCAILKCFRNEGSDRWAIGQWHNRPGVDMHSCLLLAV 257
           T+ +GRA C+ L+ F +     W +G   N    D+  CL + +
Sbjct: 99  TNILGRAKCSCLRGFSSSTGKDWILGSLDNFLCADVDECLTIGI 142

>NOTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 precursor|
          Length = 2437

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -2

Query: 289 HRCSWAPSARLTARSKQLCISTPG-LLCHCPIAHRSDPSLRKHLRIAQPALPTPC 128
           + C+ +PS     R+   CI+  G  LC CP  + + P  +   R+ QP LP+PC
Sbjct: 179 NECAVSPSP---CRNGGTCINEVGSYLCRCPPEY-TGPHCQ---RLYQPCLPSPC 226

>RSPO1_MOUSE (Q9Z132) R-spondin-1 precursor (Roof plate-specific spondin-1)|
           (Cysteine-rich and single thrombospondin
           domain-containing protein 3) (Cristin-3) (mCristin-3)
          Length = 265

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
 Frame = -1

Query: 206 LPNCPPIGSFVAKT----------LENCTACPAYPMCDSADSSAPVH---CHPH*LLSSC 66
           LP+CPP G F A+           +E+C AC ++  C     +  +H   C+P     +C
Sbjct: 76  LPSCPP-GYFDARNPDMNKCIKCKIEHCEACFSHNFCTKCQEALYLHKGRCYP-----AC 129

Query: 65  QQNSSYITLLIGC 27
            + S+     + C
Sbjct: 130 PEGSTAANSTMEC 142

>RSPO1_HUMAN (Q2MKA7) R-spondin-1 precursor (Roof plate-specific spondin-1)|
           (hRspo1)
          Length = 263

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
 Frame = -1

Query: 206 LPNCPPIGSFVAKT----------LENCTACPAYPMCDSADSSAPVH---CHPH*LLSSC 66
           LP+CPP G F A+           +E+C AC ++  C        +H   C+P     +C
Sbjct: 76  LPSCPP-GYFDARNPDMNKCIKCKIEHCEACFSHNFCTKCKEGLYLHKGRCYP-----AC 129

Query: 65  QQNSSYITLLIGCT 24
            + SS     + C+
Sbjct: 130 PEGSSAANGTMECS 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,625,914
Number of Sequences: 219361
Number of extensions: 787608
Number of successful extensions: 2410
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)