ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet69b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060 28 4.5
2CDKL2_RABIT (Q9TTK0) Cyclin-dependent kinase-like 2 (EC 2.7.11.2... 28 7.7

>DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060|
          Length = 383

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 86  KQGKQSSPTHSDMNPTRNISCHASKGK*K 172
           K G QS  TH D +PTRN S  + KG+ K
Sbjct: 50  KHGNQS--THGDSSPTRNSSGSSKKGRPK 76



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>CDKL2_RABIT (Q9TTK0) Cyclin-dependent kinase-like 2 (EC 2.7.11.22)|
           (Serine/threonine-protein kinase KKIAMRE)
          Length = 566

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 35  SLYISNKAKEHLCIPFIKQGKQSSPTHSDMNPTRNIS 145
           S  +  K K++ CIPF+K  K S     +MN T ++S
Sbjct: 435 SYRVDEKTKKY-CIPFVKPNKHSPSGIYNMNVTTSVS 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,595,269
Number of Sequences: 219361
Number of extensions: 728478
Number of successful extensions: 1495
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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