| Clone Name | rbaet69b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 32 | 0.60 | 2 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 29 | 3.0 | 3 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 29 | 3.9 |
|---|
>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 31.6 bits (70), Expect = 0.60 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -3 Query: 190 LYVPLALQLLVNDCGCAVPPGYTC 119 L +P+AL L++N+CG VP G+ C Sbjct: 113 LNLPIALSLVLNNCGKQVPNGFEC 136
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 29.3 bits (64), Expect = 3.0 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 Query: 190 LYVPLALQLLVNDCGCAVPPGYTC 119 L VPL+L ++N+CG P +TC Sbjct: 104 LNVPLSLNFILNNCGRICPEDFTC 127
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 190 LYVPLALQLLVNDCGCAVPPGYTC 119 + +P+ALQ+L++DCG P + C Sbjct: 320 IILPIALQVLIDDCGKYPPKDFKC 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,742,402 Number of Sequences: 219361 Number of extensions: 440767 Number of successful extensions: 1439 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1342 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1437 length of database: 80,573,946 effective HSP length: 40 effective length of database: 71,799,506 effective search space used: 1723188144 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)