ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet69a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KE4_PONPY (Q5RFD5) Zinc transporter SLC39A7 (Solute carrier fami... 30 1.2
2KE4_HUMAN (Q92504) Zinc transporter SLC39A7 (Solute carrier fami... 30 1.2
3TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki... 30 1.2
4KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier fami... 30 1.6
5US27_HCMVA (P09703) G-protein coupled receptor homolog US27 (HHRF2) 30 2.1
6HNF1B_XENLA (Q91910) Hepatocyte nuclear factor 1-beta (HNF-1B) (... 30 2.1
7SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calciu... 29 2.8
8AMGO2_PONPY (Q5R7M3) Amphoterin-induced protein 2 precursor (AMI... 29 2.8
9AMGO2_HUMAN (Q86SJ2) Amphoterin-induced protein 2 precursor (AMI... 29 2.8
10UBP5_SCHPO (Q09879) Probable ubiquitin carboxyl-terminal hydrola... 29 3.6
11UL63_HCMVA (P16820) Hypothetical protein UL63 29 3.6
12ZIP1_ARATH (O81123) Zinc transporter 1 precursor (ZRT/IRT-like p... 28 4.7
13KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier fami... 28 4.7
14SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3 28 4.7
15GAT1_YEAST (P43574) Transcriptional regulatory protein GAT1 28 4.7
16TESK1_RAT (Q63572) Dual specificity testis-specific protein kina... 28 6.2
17TRPE_NEIMC (Q9S358) Anthranilate synthase component 1 (EC 4.1.3.... 28 6.2
18GALT_CLOPE (Q8XKP8) Galactose-1-phosphate uridylyltransferase (E... 28 8.1
19TRPE_NEIMB (P56995) Anthranilate synthase component 1 (EC 4.1.3.... 28 8.1
20TRPE_NEIMA (Q9XAZ0) Anthranilate synthase component 1 (EC 4.1.3.... 28 8.1
21FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear... 28 8.1

>KE4_PONPY (Q5RFD5) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 33  HIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           H HSHR HSH          H HGHTH
Sbjct: 43  HGHSHR-HSHEDFHHGHSHAHGHGHTH 68



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 18  YYAYVHIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           ++ + H H H  H+H S++      H+HGH+H
Sbjct: 55  HHGHSHAHGHG-HTHESIWHGHTHGHDHGHSH 85



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>KE4_HUMAN (Q92504) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 33  HIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           H HSHR HSH          H HGHTH
Sbjct: 43  HGHSHR-HSHEDFHHGHSHAHGHGHTH 68



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 18  YYAYVHIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           ++ + H H H  H+H S++      H+HGH+H
Sbjct: 55  HHGHSHAHGHG-HTHESIWHGHTHDHDHGHSH 85



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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 167 PLVRTSSESTVSCSGKAPEGAIPGPSP 247
           P V  S+E  + C G +PE   PGP+P
Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484



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>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 476

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +3

Query: 18  YYAYVHIHSHRQ--HSHTSMFSRAMLVHEHGHTH 113
           ++ + H HSH    H H+   S     H HGHTH
Sbjct: 42  FHGHSHGHSHEDFHHGHSHGHSHEDFHHGHGHTH 75



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>US27_HCMVA (P09703) G-protein coupled receptor homolog US27 (HHRF2)|
          Length = 362

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = +1

Query: 10  LYNIMRTCIYIATDSIHIQACFLEPCWYMNMDIHIFLGTN-KKDKWRRIKQSDSPC---- 174
           L N++  C+Y+     +++AC       +N  I+I +GT  +KD W  ++     C    
Sbjct: 268 LQNVIIFCLYVGQFLAYVRAC-------LNPGIYILVGTQMRKDMWTTLRVFACCCVKQE 320

Query: 175 -PYQ 183
            PYQ
Sbjct: 321 IPYQ 324



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>HNF1B_XENLA (Q91910) Hepatocyte nuclear factor 1-beta (HNF-1B) (LFB3) (XLFB3)|
          Length = 561

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 21  YAYVHIHSHRQHSHTSMFSRAMLVHEHGHTHILRN 125
           + Y H H   Q+SHTS F  AM+V +      L N
Sbjct: 515 HMYAHKHEPPQYSHTSRFPSAMVVTDTSSISTLSN 549



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>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 699

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 33  HIHSHRQHSHTSMFSRAMLVHEHGHTHILRN 125
           H+ SHR HSH       ++  EH H HILR+
Sbjct: 151 HLPSHRSHSHQDEDEDEVVSSEH-HHHILRH 180



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>AMGO2_PONPY (Q5R7M3) Amphoterin-induced protein 2 precursor (AMIGO-2)|
          Length = 522

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 145 SIYLSYLFLRICVCPCSCTNMARENML 65
           SI L  L+L +  CPC C    ++NML
Sbjct: 409 SIVLVLLYLYLTPCPCKCKTKRQKNML 435



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>AMGO2_HUMAN (Q86SJ2) Amphoterin-induced protein 2 precursor (AMIGO-2)|
           (Alivin-1) (Differentially expressed in gastric
           adenocarcinomas) (DEGA)
          Length = 522

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 145 SIYLSYLFLRICVCPCSCTNMARENML 65
           SI L  L+L +  CPC C    ++NML
Sbjct: 409 SIVLVLLYLYLTPCPCKCKTKRQKNML 435



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>UBP5_SCHPO (Q09879) Probable ubiquitin carboxyl-terminal hydrolase 5 (EC|
           3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific
           processing protease 5) (Deubiquitinating enzyme 5)
          Length = 1108

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 233 ESPLRELSPSMKQSTQNWYGQGESDCLILLHLSFLFVPKNMCMSMFMYQH 84
           ESP+ EL+ +M++    W  QGE     +L L     P+N   S   +Q+
Sbjct: 647 ESPVNELNSTMEEVKNVWNSQGE-----ILRLYLEITPENELSSSLTHQN 691



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>UL63_HCMVA (P16820) Hypothetical protein UL63|
          Length = 129

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
 Frame = -3

Query: 145 SIYLSYLFLRICVCPCSC-------TNMARENMLVCECCRWLCICTYA*YYTIIC 2
           S+Y++Y++  +C   C C         + R N  + + C  LC  T++   T IC
Sbjct: 56  SLYVTYIYYTLCTPNCRCCIRRKNSPYLYRLNFCLIDTCLELCPPTFSLCITKIC 110



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>ZIP1_ARATH (O81123) Zinc transporter 1 precursor (ZRT/IRT-like protein 1)|
          Length = 355

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 27  YVHIHSHRQHSHTSMFSRAMLVHEHGHTHILRNK 128
           +VHIH+H  H HT           HG T ++R +
Sbjct: 176 HVHIHTHASHGHT-----------HGSTELIRRR 198



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>KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 33  HIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           H HSHR+ SH          H HGHTH
Sbjct: 43  HGHSHRR-SHEDFHHGHSYAHGHGHTH 68



 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 21  YAYVHIHSHRQHSHTSMFSRAMLVHEHGHTH 113
           ++Y H H H   +H S++      HEHGH H
Sbjct: 58  HSYAHGHGH---THESIWHGHTHGHEHGHAH 85



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>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 10/53 (18%)
 Frame = -3

Query: 139 YLSYLFLRICVCPCSCTNM-----ARENMLVCEC-----CRWLCICTYA*YYT 11
           YL  +   +CVC C C  M       E+  V  C     C  +C+C Y   Y+
Sbjct: 364 YLCSILSSVCVCVCVCVCMYVCMCVMESACVYVCVMESACVCVCMCVYVCVYS 416



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>GAT1_YEAST (P43574) Transcriptional regulatory protein GAT1|
          Length = 510

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 159 LFNPSPFIFLICS*EYVYVHVH 94
           LF PSP +F+ C+  Y+ +++H
Sbjct: 8   LFRPSPVLFIACAYIYIDIYIH 29



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>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 628

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 173 VRTSSESTVSCSGKAPEGAIPGPSP 247
           V  S+E  + C G +PE   PGP+P
Sbjct: 462 VGPSTEERMDCEGSSPEPEPPGPAP 486



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>TRPE_NEIMC (Q9S358) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 491

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 246 GDGPGIAPSGAFPEHETVDSELVRTRGIRLFNPSPFIF 133
           GD   + PS      E  DS L   R +R  NPSP++F
Sbjct: 238 GDCMQVVPSQRM-SMEFTDSSLALYRALRTLNPSPYLF 274



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>GALT_CLOPE (Q8XKP8) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)|
           (Gal-1-P uridylyltransferase)
           (UDP-glucose--hexose-1-phosphate uridylyltransferase)
          Length = 498

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 13  YNIMRTCIYIATDSIHIQACFLEPCWYMNMDIHIFLGTNKKD 138
           Y++ ++  YI TD I     F  P  Y  MDI I L   +KD
Sbjct: 115 YSLSKSSNYIRTDRIAKNINFKAPSKYGTMDITINLSKPEKD 156



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>TRPE_NEIMB (P56995) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 491

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 246 GDGPGIAPSGAFPEHETVDSELVRTRGIRLFNPSPFIF 133
           GD   + PS      E  DS L   R +R  NPSP++F
Sbjct: 238 GDCMQVVPSQRM-SMEFTDSPLALYRALRTLNPSPYLF 274



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>TRPE_NEIMA (Q9XAZ0) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 491

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 246 GDGPGIAPSGAFPEHETVDSELVRTRGIRLFNPSPFIF 133
           GD   + PS      E  DS L   R +R  NPSP++F
Sbjct: 238 GDCMQVVPSQRM-SMEFTDSPLALYRALRTLNPSPYLF 274



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>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3|
           forkhead homolog 1) (HNF-3/forkhead-like protein 1)
           (HFH-1) (HFH-1l)
          Length = 400

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 176 RTSSESTVSCSGKAPEGAIPGPS 244
           R S  +TVS SG  PE A PGP+
Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPA 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,429,388
Number of Sequences: 219361
Number of extensions: 931059
Number of successful extensions: 2983
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2969
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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