| Clone Name | rbaet69a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U69632.1|TAU69632 Triticum aestivum Cu/Zn superoxide dismutase (SOD1.2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 781 Score = 307 bits (155), Expect = 1e-80 Identities = 168/171 (98%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 234 accagagctggaaac-agcgacctacaacggggtcaggccaacaacaccacatgcaagtc 292 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 accagagatggaaaccagcgacctacaacggggtcaggccaacaacaccacatgcaagtc 599 Query: 293 ttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatctt 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatctt 539 Query: 353 caagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 538 caagctcatgaacaacaaacgctctcccaacaactgcattagggccagtca 488 Score = 137 bits (69), Expect = 3e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 86 tttatttgataaatttaactttacactgatacaaatgatcaacagaaactatcaagcacc 145 ||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 780 tttatttgataaactcaactttacactgatacaaacgatcaacagaaactattaagcatc 721 Query: 146 ggaggtgtgaaatccagggaaaacgagactggcgtcgttacaggtatgactggagatgca 205 | | ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 720 tggtatttgaaatccaggtaaaacgagaatggcgtcgttacaagtatgactggagatgca 661 Query: 206 a 206 | Sbjct: 660 a 660
>gb|U69536.1|TAU69536 Triticum aestivum Cu/Zn superoxide dismutase (SOD1.1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 883 Score = 307 bits (155), Expect = 1e-80 Identities = 168/171 (98%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 234 accagagctggaaac-agcgacctacaacggggtcaggccaacaacaccacatgcaagtc 292 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 accagagatggaaaccagcgacctacaacggggtcaggccaacaacaccacatgcaagtc 596 Query: 293 ttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatctt 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 ttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatctt 536 Query: 353 caagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 535 caagctcatgaacaacaaacgctctcccaacaactgcattagggccagtca 485 Score = 226 bits (114), Expect = 4e-56 Identities = 179/198 (90%), Gaps = 2/198 (1%) Strand = Plus / Minus Query: 10 agcattttatagcttacgcacaccaaaaattctcaagttcaagcttcatagctcaacaag 69 |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 853 agcattttatagcttacgcacaccaaaa-ttcccaagttcacgcttcatagctcaacaag 795 Query: 70 ac-aaagtttggaaacatttatttgataaatttaactttacactgatacaaatgatcaac 128 || ||||| || |||||||||||||||||| | ||||||||||||||||||| ||||||| Sbjct: 794 acgaaagtgtgcaaacatttatttgataaactcaactttacactgatacaaacgatcaac 735 Query: 129 agaaactatcaagcaccggaggtgtgaaatccagggaaaacgagactggcgtcgttacag 188 ||||||||| ||||| | || | ||||||||||| ||||||||| ||||||||||||| Sbjct: 734 agaaactattaagcatccgatatttgaaatccaggtaaaacgagaatggcgtcgttacaa 675 Query: 189 gtatgactggagatgcaa 206 |||||||| ||||||||| Sbjct: 674 gtatgactagagatgcaa 657
>gb|BT018046.1| Zea mays clone EL01N0531C02.c mRNA sequence Length = 969 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 253 acctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttccagta 312 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 668 acctacaatggagtcaggccaacaacaccacatgccagtcttccaccagcatttccagta 609 Query: 313 ctgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaat 372 ||||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||| Sbjct: 608 gagaggctgagctcatggccccctttccccaaatcatcttcaagctcatgaaccacaaat 549 Query: 373 gctctcccaacaactgcattagggccagtca 403 |||||||||||||||| ||| |||||||||| Sbjct: 548 gctctcccaacaactgaatttgggccagtca 518
>gb|AY108035.1| Zea mays PCO095461 mRNA sequence Length = 968 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 253 acctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttccagta 312 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 677 acctacaatggagtcaggccaacaacaccacatgccagtcttccaccagcatttccagta 618 Query: 313 ctgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaat 372 ||||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||| Sbjct: 617 gagaggctgagctcatggccccctttccccaaatcatcttcaagctcatgaaccacaaat 558 Query: 373 gctctcccaacaactgcattagggccagtca 403 |||||||||||||||| ||| |||||||||| Sbjct: 557 gctctcccaacaactgaatttgggccagtca 527
>ref|XM_507610.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 992 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 703 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 644 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 643 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 584 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 583 cgaatgctctcccaacaacagaatttgggcca 552
>ref|XM_483791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 863 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 707 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 648 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 647 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 588 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 587 cgaatgctctcccaacaacagaatttgggcca 556
>ref|XM_507609.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 1026 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 723 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 664 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 663 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 604 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 603 cgaatgctctcccaacaacagaatttgggcca 572
>ref|XM_507341.2| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 1038 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 723 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 664 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 663 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 604 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 603 cgaatgctctcccaacaacagaatttgggcca 572
>dbj|AK104240.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B03, full insert sequence Length = 1026 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 723 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 664 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 663 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 604 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 603 cgaatgctctcccaacaacagaatttgggcca 572
>dbj|AK104013.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E03, full insert sequence Length = 992 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 703 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 644 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 643 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 584 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 583 cgaatgctctcccaacaacagaatttgggcca 552
>dbj|AK068627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154J21, full insert sequence Length = 863 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 707 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 648 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 647 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 588 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 587 cgaatgctctcccaacaacagaatttgggcca 556
>dbj|AK059841.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D10, full insert sequence Length = 1038 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 723 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 664 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 663 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 604 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 603 cgaatgctctcccaacaacagaatttgggcca 572
>dbj|D85239.1| Oryza sativa (japonica cultivar-group) mRNA for plastidic copper/zinc-superoxide dismutase, complete cds Length = 951 Score = 190 bits (96), Expect = 2e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttc 307 |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 688 cagcgacctacaacggggtcagcccaacaacaccgcatgcaagtcgcccaccagcatttc 629 Query: 308 cagtactgaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaa 367 |||||||||| || |||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct: 628 cagtactgagactaagctcatggccacccttccccaaatcatcttcaagctcatgaacaa 569 Query: 368 caaatgctctcccaacaactgcattagggcca 399 | ||||||||||||||||| | ||| |||||| Sbjct: 568 cgaatgctctcccaacaacagaatttgggcca 537
>gb|AF385581.2| Dichanthelium lanuginosum copper/zinc superoxide dismutase precursor (SOD1) mRNA, complete cds; nuclear gene for chloroplast product Length = 643 Score = 184 bits (93), Expect = 1e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 255 ctacaacggggtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtact 314 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 643 ctacaacgaagtcaggccaacaacaccacatgccagtcttccaccagcatttccagtagt 584 Query: 315 gaggctgagctcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgc 374 ||||| ||||||||||| | ||| ||||| |||||||||||||||||||| |||||||| Sbjct: 583 aaggctaagctcatgcccccgtttccccaaatcatcttcaagctcatgaaccacaaatgc 524 Query: 375 tctcccaacaactgcattagggcca 399 |||||||||||||| ||| |||||| Sbjct: 523 tctcccaacaactgaattcgggcca 499
>gb|AY898945.1| Lilium hybrid cultivar superoxide dismutase (SOD) mRNA, complete cds Length = 872 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||||||||||||||| | |||||| |||||||||||||| | |||||||||||||| Sbjct: 673 ccaacaacaccacatgccaatcttcccccagcatttccagtggtcaggctgagctcatga 614 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgca 390 || || ||||||| |||||||||||||||||||| |||| |||||| ||||| |||||| Sbjct: 613 ccgccctttcccagatcatcttcaagctcatgaaccacaattgctcttccaactactgca 554 Query: 391 t 391 | Sbjct: 553 t 553
>gb|DQ088819.1| Gossypium hirsutum chloroplast Cu/ZnSOD mRNA, complete cds; nuclear gene for chloroplast product Length = 762 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 ||||||||||||||||||||||| | |||||| |||||||| ||||| | || || || Sbjct: 752 gtcaggccaacaacaccacatgccaatcttccgccagcattcccagtggttagactaagt 693 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 692 tcatgtccaccctttccaagatcatcctcaagctcatgaaccacaaatgctcttccaaca 633 Query: 385 actgcattagggcca 399 || ||||| |||||| Sbjct: 632 accgcattggggcca 618
>gb|AY434497.1| Trifolium pratense superoxide dismutase mRNA, complete cds; nuclear gene for chloroplast product Length = 1016 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| ||||||||||||||| || | ||||||||||||||||||||| || | || || Sbjct: 679 gtcaagccaacaacaccacaagctaatcttccaccagcatttccagtgctcaaactaagt 620 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | ||||||||||||||| || || || || |||||||||||| Sbjct: 619 tcatgtccaccctttccgaggtcatcttcaagctcgtggaccactaaggctctcccaaca 560 Query: 385 actgcattagggccagt 401 |||| ||| |||||||| Sbjct: 559 actgaattggggccagt 543
>gb|DQ120514.1| Gossypium hirsutum chloroplast Cu/Zn superoxide dismutase mRNA, complete cds; nuclear gene for chloroplast product Length = 1043 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| |||||||||||||||||| | |||||| |||||||| ||||| | || || || Sbjct: 735 gtcaagccaacaacaccacatgccaatcttccgccagcattcccagtggttagactaagt 676 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 675 tcatgtccaccctttccaagatcatcctcaagctcatgaaccacaaatgctcttccaaca 616 Query: 385 actgcattagggcca 399 || ||||| |||||| Sbjct: 615 accgcattggggcca 601
>emb|AJ854253.1| Larix gmelinii partial sod1 gene for Cu-Zn superoxide dismutase, exons 1-2 Length = 358 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 332 caccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcat 391 ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 286 cacctttccccaaatcttcttcaagctcatgaaccacaaatgctctcccaacaactgaat 227 Query: 392 tagggccagtca 403 | |||||||||| Sbjct: 226 ttgggccagtca 215
>dbj|D49486.1| Solidago canadensis var. scabra mRNA for copper/zinc-superoxide dismutase precursor, complete cds, clone: SAcSODpl Length = 820 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 274 acaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgccca 333 ||||||||||| || |||||||| || ||||||||||| |||||| |||||||| ||| Sbjct: 659 acaacaccacaagccagtcttcctcctgcatttccagttgagaggctaagctcatgacca 600 Query: 334 ccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcatta 393 || ||||| | |||||| ||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 599 ccctttccgaggtcatcagcaagctcatgaaccacaaaggctcttccaaccacagcatta 540 Query: 394 gg 395 || Sbjct: 539 gg 538
>emb|X56435.1|PSSODII Pea mRNA for Cu/Zn superoxide dismutase II (SOD9) Length = 901 Score = 89.7 bits (45), Expect = 7e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| |||||| |||||||| || | ||||||||||||||||||||| || | || || Sbjct: 632 gtcaagccaaccacaccacaagctaatcttccaccagcatttccagtgctcaaactaagt 573 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | |||||||| |||||| ||||| || || ||||||||||| Sbjct: 572 tcatgtccaccctttccaaggtcatcttgaagctcgtgaaccactaaggctctcccaacg 513 Query: 385 actgcattagggccagt 401 |||| ||| |||||||| Sbjct: 512 actgaattggggccagt 496
>gb|AF056621.1|AF056621 Medicago sativa putative Cu/Zn superoxide dismutase precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 900 Score = 89.7 bits (45), Expect = 7e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| |||||| |||||||| || | ||||||||| ||||||||||| || | || || Sbjct: 652 gtcaagccaaccacaccacaggctaatcttccaccggcatttccagtgctcaaactaagt 593 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | ||||||||||||||||||||| || || |||||||||| Sbjct: 592 tcatgtccaccctttccaaggtcatcttcaagctcatgaaccactaaggctctcccaatg 533 Query: 385 actgcattagggccagt 401 |||| ||| |||||||| Sbjct: 532 actgaattggggccagt 516
>gb|AF056622.1|AF056622 Vitis vinifera putative Cu/Zn superoxide dismutase precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 902 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 268 aggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctca 327 |||||||||||||||||||| | ||||||||| ||||| ||||| | ||||| || ||| Sbjct: 664 aggccaacaacaccacatgccaatcttccacctgcattgccagtggtaaggctaagttca 605 Query: 328 tgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaact 387 |||||||| || || | |||||| ||||| |||||||| || || ||||| |||| ||| Sbjct: 604 tgcccacccttcccaaggtcatcctcaagttcatgaaccaccaaggctcttccaatcact 545 Query: 388 gcattagg 395 |||||||| Sbjct: 544 gcattagg 537
>gb|U08097.1|PTU08097 Populus tremuloides Cu/Zn-superoxide dismutase preprotein (Cu/Zn-SOD) mRNA, complete cds Length = 685 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| |||||| |||||||| || | ||||||||||||||||||||| || | || || Sbjct: 607 gtcaagccaaccacaccacaagctaatcttccaccagcatttccagtgctcaaactaagt 548 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | |||||||| |||||| ||||| || || ||||||||||| Sbjct: 547 tcatgtccaccctttccaaggtcatcttgaagctcgtgaaccactaaggctctcccaacg 488 Query: 385 actgcattagggc 397 |||| ||| |||| Sbjct: 487 actgaattggggc 475
>gb|J04087.1|PEASOD Pea chloroplastic copper/zinc-superoxide dismutase mRNA, complete cds Length = 825 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 265 gtcaggccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagc 324 |||| |||||| |||||||| || | ||||||||||||||||||||| || | || || Sbjct: 609 gtcaagccaaccacaccacaagctaatcttccaccagcatttccagtgctcaaactaagt 550 Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 ||||| ||||| ||||| | |||||||| |||||| ||||| || || ||||| ||||| Sbjct: 549 tcatgtccaccctttccaaggtcatcttgaagctcgtgaaccactaaggctcttccaacg 490 Query: 385 actgcattagggccagt 401 |||| ||| |||||||| Sbjct: 489 actgaattggggccagt 473
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 340 cccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcca 399 ||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 28127344 cccaaatcatcttcaagctcatgaacaacgaatgctctcccaacaacagaatttgggcca 28127285 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 283 catgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 |||||||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 28127481 catgcaagtcgcccaccagcatttccagtactgagactaagctcatggccacct 28127428 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacacc 281 |||||||||||||||||||||| ||||||||||| Sbjct: 28127948 cagcgacctacaacggggtcagcccaacaacacc 28127915
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 340 cccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcca 399 ||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 124839 cccaaatcatcttcaagctcatgaacaacgaatgctctcccaacaacagaatttgggcca 124780 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 283 catgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 |||||||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 124976 catgcaagtcgcccaccagcatttccagtactgagactaagctcatggccacct 124923 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacacc 281 |||||||||||||||||||||| ||||||||||| Sbjct: 125443 cagcgacctacaacggggtcagcccaacaacacc 125410
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 340 cccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcca 399 ||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 10817 cccaaatcatcttcaagctcatgaacaacgaatgctctcccaacaacagaatttgggcca 10758 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 283 catgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 |||||||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 10954 catgcaagtcgcccaccagcatttccagtactgagactaagctcatggccacct 10901 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacacc 281 |||||||||||||||||||||| ||||||||||| Sbjct: 11421 cagcgacctacaacggggtcagcccaacaacacc 11388
>dbj|AB026724.1| Oryza sativa (japonica cultivar-group) sodCp gene for copper/zinc superoxide dismutase, complete cds Length = 4297 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 340 cccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcca 399 ||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 3359 cccaaatcatcttcaagctcatgaacaacgaatgctctcccaacaacagaatttgggcca 3300 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 283 catgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 |||||||||| ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 3496 catgcaagtcgcccaccagcatttccagtactgagactaagctcatggccacct 3443 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 248 cagcgacctacaacggggtcaggccaacaacacc 281 |||||||||||||||||||||| ||||||||||| Sbjct: 3963 cagcgacctacaacggggtcagcccaacaacacc 3930
>gb|BT012694.1| Lycopersicon esculentum clone 113564F, mRNA sequence Length = 1048 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| ||||| ||||| | || |||||||||||| ||||| | || ||||| ||||| Sbjct: 685 ccaaccacaccgcatgccaatcgtccaccagcattgccagtggtaagactgagttcatgg 626 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 ||||| ||||| | |||||| |||||||||||||| |||| ||||| |||||||||| Sbjct: 625 ccaccctttccgaggtcatcctcaagctcatgaaccacaagtgctcgtccaacaactg 568
>gb|AF527880.1| Lycopersicon esculentum superoxidase dismutase mRNA, complete cds Length = 963 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| ||||| ||||| | || |||||||||||| ||||| | || ||||| ||||| Sbjct: 662 ccaaccacaccgcatgccaatcgtccaccagcattgccagtggtaagactgagttcatgg 603 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 ||||| ||||| | |||||| |||||||||||||| |||| ||||| |||||||||| Sbjct: 602 ccaccctttccgaggtcatcctcaagctcatgaaccacaagtgctcgtccaacaactg 545
>emb|X14041.1|LECHSOD Tomato mRNA for chloroplast Cu-Zn superoxide dismutase (SOD) Length = 1033 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| ||||| ||||| | || |||||||||||| ||||| | || ||||| ||||| Sbjct: 669 ccaaccacaccgcatgccaatcgtccaccagcattgccagtggtaagactgagttcatgg 610 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 ||||| ||||| | |||||| |||||||||||||| |||| ||||| |||||||||| Sbjct: 609 ccaccctttccgaggtcatcctcaagctcatgaaccacaagtgctcgtccaacaactg 552
>gb|M37151.1|TOMSODB Tomato superoxide dismutase (SOD) mRNA, complete cds Length = 1034 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| ||||| ||||| | || |||||||||||| ||||| | || ||||| ||||| Sbjct: 669 ccaaccacaccgcatgccaatcgtccaccagcattgccagtggtaagactgagttcatgg 610 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 ||||| ||||| | |||||| |||||||||||||| |||| ||||| |||||||||| Sbjct: 609 ccaccctttccgaggtcatcctcaagctcatgaaccacaagtgctcgtccaacaactg 552
>gb|DQ223864.1| Nelumbo nucifera copper-zinc superoxide dismutase (SOD) mRNA, complete cds Length = 461 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 ||||||||| | |||||||| ||||| ||||| | ||||| || ||||||||||| || Sbjct: 439 accacatgccaaccttccacctgcattgccagttgtaaggctaagttcatgcccaccctt 380 Query: 339 tcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcc 398 ||| | |||||| || | |||||||| ||||||||||| |||||||| | |||||| || Sbjct: 379 tccaaggtcatcctccaattcatgaaccacaaatgctcttccaacaacggaattaggtcc 320 Query: 399 agtca 403 ||||| Sbjct: 319 agtca 315
>gb|AY881158.1| Nelumbo nucifera isolate 8 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 ||||||||| | |||||||| ||||| ||||| | ||||| || ||||||||||| || Sbjct: 439 accacatgccaaccttccacctgcattgccagttgtaaggctaagttcatgcccaccctt 380 Query: 339 tcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcc 398 ||| | |||||| || | |||||||| ||||||||||| |||||||| | |||||| || Sbjct: 379 tccaaggtcatcctccaattcatgaaccacaaatgctcttccaacaacggaattaggtcc 320 Query: 399 agtca 403 ||||| Sbjct: 319 agtca 315
>gb|AY881157.1| Nelumbo nucifera isolate 6 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 ||||||||| | |||||||| ||||| ||||| | ||||| || ||||||||||| || Sbjct: 439 accacatgccaaccttccacctgcattgccagttgtaaggctaagttcatgcccaccctt 380 Query: 339 tcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattagggcc 398 ||| | |||||| || | |||||||| ||||||||||| |||||||| | |||||| || Sbjct: 379 tccaaggtcatcctccaattcatgaaccacaaatgctcttccaacaacggaattaggtcc 320 Query: 399 agtca 403 ||||| Sbjct: 319 agtca 315
>gb|AY881161.1| Nelumbo nucifera isolate 10 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AY881160.1| Nelumbo nucifera isolate 9 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AY881159.1| Nelumbo nucifera isolate 8(2) copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AY881156.1| Nelumbo nucifera isolate 5 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AY881154.1| Nelumbo nucifera isolate 3 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AY881153.1| Nelumbo nucifera isolate 1 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 292 cttccaccagcatttccagtactgaggctgagctcatgcccaccttttcccaagtcatct 351 |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| | |||||| Sbjct: 426 cttccacctgcattgccagttgtaaggctaagttcatgcccaccctttccaaggtcatcc 367 Query: 352 tcaagctcatgaacaacaaatgctctcccaacaactgcattagggccagtca 403 || | |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct: 366 tccaattcatgaaccacaaatgctcttccaacaacggaattaggtccagtca 315
>gb|AF034630.1|AF034630 Panax ginseng Cu/Zn superoxide dismutase (SOD) mRNA, complete cds Length = 624 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 |||||| ||||| |||||||||||||||||||| || |||||| ||||| ||||| || Sbjct: 456 accacaggcaagccttccaccagcatttccagtgcttttgctgagttcatgaccaccctt 397 Query: 339 tcccaagtcatc 350 |||||||||||| Sbjct: 396 tcccaagtcatc 385
>emb|AJ278668.1|PTR278668 Populus tremula x Populus tremuloides chloroplast mRNA for putative CuZn-superoxide dismutase (cp-SOD 1 gene) Length = 1029 Score = 65.9 bits (33), Expect = 9e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 |||||||| |||||||| | ||| ||||| ||||| ||||| | ||| || |||||| Sbjct: 634 ccaacaactccacatgccaatctaccacctgcattcccagtggttgagcttagttcatgc 575 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgca 390 ||||| ||||| | |||||| || ||||||||||| |||| |||||| |||| |||||| Sbjct: 574 ccaccctttccaaggtcatcctctagctcatgaaccacaagtgctcttccaatcactgca 515 Query: 391 ttagg 395 ||||| Sbjct: 514 ttagg 510
>dbj|D10244.1|SPICZD Spinacia oleracea mRNA for copper/zinc-superoxide dismutase, complete cds Length = 923 Score = 65.9 bits (33), Expect = 9e-08 Identities = 108/133 (81%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| ||||||||||| | ||||||||||||||| ||||| | | || || || || Sbjct: 657 ccaaccacaccacatgccaatcttccaccagcattcccagtggtcggactaagttcgtgt 598 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgca 390 ||||||||||| | |||||| ||||| |||||||| |||| ||||| || ||||||| | Sbjct: 597 ccaccttttccaaggtcatcctcaagttcatgaaccacaagggctctaccgacaactgaa 538 Query: 391 ttagggccagtca 403 || || ||||||| Sbjct: 537 tttggtccagtca 525
>gb|AY133756.1| Arabidopsis thaliana clone U18350 putative copper/zinc superoxide dismutase (At2g28190) mRNA, complete cds Length = 682 Score = 61.9 bits (31), Expect = 1e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 ||||||||||| | ||| || || || |||||||| | || || |||||||| ||||| Sbjct: 629 acaccacatgccaatctcccgcctgcgtttccagtggtcagactaagctcatggccaccc 570 Query: 337 tttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattaggg 396 ||||| | |||||| | |||||| ||||| ||||| ||||| |||||||| | |||||| Sbjct: 569 tttccgaggtcatccttaagctcgtgaaccacaaaggctcttccaacaacagaattagga 510 Query: 397 ccagtca 403 ||||||| Sbjct: 509 ccagtca 503
>emb|AJ786258.1| Helianthus annuus mRNA for Cu/Zn superoxide dismutase, (sod2 gene) Length = 729 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 ||||||||||| ||||||||||||||||||||| || ||| ||||||||||| || || Sbjct: 527 accacatgcaactcttccaccagcatttccagtgcttttgcttagctcatgccctccctt 468 Query: 339 tcc 341 ||| Sbjct: 467 tcc 465
>emb|BX821430.1|CNS0AA96 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 61.9 bits (31), Expect = 1e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 ||||||||||| | ||| || || || |||||||| | || || |||||||| ||||| Sbjct: 396 acaccacatgccaatctcccgcctgcgtttccagtggtcagactaagctcatggccaccc 337 Query: 337 tttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattaggg 396 ||||| | |||||| | |||||| ||||| ||||| ||||| |||||||| | |||||| Sbjct: 336 tttccgaggtcatccttaagctcgtgaaccacaaaggctcttccaacaacagaattagga 277 Query: 397 ccagtca 403 ||||||| Sbjct: 276 ccagtca 270
>emb|BX819296.1|CNS0AA8Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 898 Score = 61.9 bits (31), Expect = 1e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 ||||||||||| | ||| || || || |||||||| | || || |||||||| ||||| Sbjct: 664 acaccacatgccaatctcccgcctgcgtttccagtggtcagactaagctcatggccaccc 605 Query: 337 tttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattaggg 396 ||||| | |||||| | |||||| ||||| ||||| ||||| |||||||| | |||||| Sbjct: 604 tttccgaggtcatccttaagctcgtgaaccacaaaggctcttccaacaacagaattagga 545 Query: 397 ccagtca 403 ||||||| Sbjct: 544 ccagtca 538
>gb|AY087944.1| Arabidopsis thaliana clone 39796 mRNA, complete sequence Length = 939 Score = 61.9 bits (31), Expect = 1e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacct 336 ||||||||||| | ||| || || || |||||||| | || || |||||||| ||||| Sbjct: 677 acaccacatgccaatctcccgcctgcgtttccagtggtcagactaagctcatggccaccc 618 Query: 337 tttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcattaggg 396 ||||| | |||||| | |||||| ||||| ||||| ||||| |||||||| | |||||| Sbjct: 617 tttccgaggtcatccttaagctcgtgaaccacaaaggctcttccaacaacagaattagga 558 Query: 397 ccagtca 403 ||||||| Sbjct: 557 ccagtca 551
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 333 accttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgcatt 392 ||||||||| | |||||||||||||||||||| || || ||||||||||| |||| ||| Sbjct: 50667 accttttccaagatcatcttcaagctcatgaaccactaaggctctcccaacgactgaatt 50726 Query: 393 agggcc 398 ||||| Sbjct: 50727 ggggcc 50732
>emb|X14352.1|PHSOD Petunia mRNA for chloroplast superoxide dismutase (SOD) (EC 1.15.1.1) Length = 937 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||| |||||||| || | || |||||||||||||||||| | |||||||| || || Sbjct: 707 ccaaccacaccacaggccaatcgtccaccagcatttccagtggtaaggctgagttcgtgg 648 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 ||||| ||||| | ||||| |||||||| ||||| |||| ||||| ||||| |||| Sbjct: 647 ccaccctttccaagatcatcctcaagctcgtgaactacaagcgctcttccaacgactg 590
>dbj|D49485.1| Solidago canadensis var. scabra mRNA for copper/zinc-superoxide dismutase, complete cds, clone: SAcSODcy Length = 700 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagt 311 ||||||||||| ||||||||||||||||||||| Sbjct: 462 accacatgcaactcttccaccagcatttccagt 430
>gb|AF479059.1| Sandersonia aurantiaca copper/zinc superoxide dismutase mRNA, complete cds Length = 799 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 280 ccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccacctttt 339 ||||| |||| ||||||||||||||||||||| || ||| || ||||||||||| ||| Sbjct: 456 ccacaagcaactcttccaccagcatttccagtgctcttgctaagttcatgcccacccttt 397 Query: 340 cccaagtcatc 350 || | |||||| Sbjct: 396 ccaaggtcatc 386
>gb|AF328859.1| Avicennia marina Cu-Zn superoxide dismutase mRNA, complete cds Length = 768 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagta 312 |||||| |||| |||||||||||||||||||||| Sbjct: 484 accacaagcaactcttccaccagcatttccagta 451
>emb|AJ428575.2|OEU428575 Olea europaea Cu/Zn super-oxide dismutase (ole e 5 allergen) Length = 714 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagt 311 |||||| |||| ||||||||||||||||||||| Sbjct: 438 accacaagcaactcttccaccagcatttccagt 406
>emb|X58579.1|PSCUZNPST P.sylvestris mRNA for CuZn superoxide dismutase, clone PST13 Length = 676 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 |||||||||||||| |||| |||||| || | |||||| ||||||| ||| || |||| | Sbjct: 357 tcatgcccacctttccccaggtcatcctctaactcatggacaacaagtgccctaccaata 298 Query: 385 actg 388 |||| Sbjct: 297 actg 294
>emb|AJ844003.1| Plantago major mRNA for copper-zinc superoxide dismutase (csd1 gene) Length = 779 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgcccaccttt 338 |||||| |||| |||||||||||||||||| ||| | |||||| ||||| ||||| | Sbjct: 501 accacaagcaactcttccaccagcatttccggtagttttgctgagttcatgtccacccct 442 Query: 339 tcccaagtcatc 350 |||||| ||||| Sbjct: 441 tcccaaatcatc 430
>gb|AF434186.1|AF434186 Pinus pinaster Cu-Zn-superoxide dismutase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 961 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 325 tcatgcccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaaca 384 |||||||||||||| |||| |||||| || | |||||| ||||||| ||| || |||| | Sbjct: 578 tcatgcccacctttccccaggtcatcctctaactcatggacaacaagtgccctaccaata 519 Query: 385 actg 388 |||| Sbjct: 518 actg 515
>emb|X77175.1|LESOD1 L.esculentum (cherry tomato) SOD Cp;Le:1 gene (part 1) Length = 3676 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 345 gtcatcttcaagctcatgaacaacaaatgctctcccaacaactg 388 |||||| |||||||||||||| |||| ||||| |||||||||| Sbjct: 2656 gtcatcctcaagctcatgaaccacaagtgctcgtccaacaactg 2613
>gb|AF054151.1|AF054151 Zantedeschia aethiopica Cu/Zn-superoxide dismutase precursor (sod4) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1246 Score = 48.1 bits (24), Expect = 0.022 Identities = 99/124 (79%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagtactgaggctgagctcatgc 330 ||||||||||| ||||| | ||| || ||||||||||| || | ||||| || ||||| Sbjct: 635 ccaacaacaccgcatgccaatctgcccccagcatttcctgtggtaaggctaagttcatga 576 Query: 331 ccaccttttcccaagtcatcttcaagctcatgaacaacaaatgctctcccaacaactgca 390 || || ||||| | || || |||||||| || || ||||||||||| ||||| |||| | Sbjct: 575 cctccctttcctagatcgtcctcaagctcgtgcaccacaaatgctcttccaactactgaa 516 Query: 391 ttag 394 |||| Sbjct: 515 ttag 512
>emb|X58578.1|PSCUZNPS3 P.sylvestris mRNA for CuZn superoxide dismutase, clone PS3 Length = 821 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Minus Query: 274 acaacaccacatgcaagtcttccaccagcatttcc 308 ||||| ||||| |||||||| |||||||||||||| Sbjct: 561 acaaccccacaagcaagtctgccaccagcatttcc 527
>gb|AY440553.1| Armigeres subalbatus ASAP ID: 40427 superoxide dismutase mRNA sequence Length = 744 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 gcaagtcttccaccagcatttccagt 311 ||||||| |||||||||||||||||| Sbjct: 596 gcaagtcgtccaccagcatttccagt 571
>emb|AM087022.1| Larix sibirica partial mRNA for Cu-Zn superoxide dismutase (sod1.2 gene) Length = 300 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 325 tcatgcccaccttttcccaagtcatc 350 ||||||||||||||||||| |||||| Sbjct: 44 tcatgcccaccttttcccaggtcatc 19
>emb|AL110484.2|CEY38E10A Caenorhabditis elegans YAC Y38E10A, complete sequence Length = 110933 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 aacatttatttgataaatttaa 103 |||||||||||||||||||||| Sbjct: 57678 aacatttatttgataaatttaa 57657
>dbj|AB044878.1| Equus caballus DNA, microsatellite TKY378 Length = 726 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 acaccagagctggaaacagcga 253 |||||||||||||||||||||| Sbjct: 645 acaccagagctggaaacagcga 624
>ref|NM_064297.3| Caenorhabditis elegans Y38E10A.15 (Y38E10A.15) mRNA, complete cds Length = 325 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 aacatttatttgataaatttaa 103 |||||||||||||||||||||| Sbjct: 319 aacatttatttgataaatttaa 298
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 agtcatcttcaagctcatgaa 364 ||||||||||||||||||||| Sbjct: 147897 agtcatcttcaagctcatgaa 147877
>gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, complete sequence Length = 217553 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 acatttatttgataaatttaa 103 ||||||||||||||||||||| Sbjct: 158231 acatttatttgataaatttaa 158251
>gb|AC123045.2| Mus musculus BAC clone RP24-549E10 from chromosome 7, complete sequence Length = 142457 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 agtcatcttcaagctcatgaa 364 ||||||||||||||||||||| Sbjct: 103208 agtcatcttcaagctcatgaa 103228
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 agtcatcttcaagctcatgaa 364 ||||||||||||||||||||| Sbjct: 145623 agtcatcttcaagctcatgaa 145643
>emb|AL353787.21| Human DNA sequence from clone RP11-667H17 on chromosome 9 Contains the 5' end of the SLC28A3 gene for solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, (CNT3), complete sequence Length = 83639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 ggagatgcaacaaaaagggta 217 ||||||||||||||||||||| Sbjct: 15496 ggagatgcaacaaaaagggta 15476
>emb|X73139.1|IBSOD I.batatas mRNA for superoxide dismutase Length = 702 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 298 ccagcatttccagtactgaggctgagctcatgcccaccttt 338 |||||||||||||| || |||||||||||| |||||||| Sbjct: 445 ccagcatttccagtgcttttgctgagctcatggccaccttt 405
>emb|X55974.1|NPSODM N.plumbaginifolia mRNA for superoxide dismutase Length = 837 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagt 311 |||||| |||| |||||||||||||||||||| Sbjct: 526 accacaagcaacccttccaccagcatttccagt 494
>emb|AJ002604.1|PSAJ2604 Pinus sylvestris mRNA for novel high pI CuZn-superoxide dismutase Length = 1038 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 268 aggccaacaacaccacatgcaagtcttccaccagcatttcc 308 ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 443 aggccaatcacaccacatgcgacccttccaccagcatttcc 403
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 gctgagctcatgcccaccttttccc 342 |||||||||||||||||||| |||| Sbjct: 47365 gctgagctcatgcccaccttgtccc 47389
>emb|AJ307586.1|PSY307586 Pinus sylvestris mRNA for superoxide dismutase (sod gene) Length = 1072 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 268 aggccaacaacaccacatgcaagtcttccaccagcatttcc 308 ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 477 aggccaatcacaccacatgcgacccttccaccagcatttcc 437
>emb|AJ278669.1|PTR278669 Populus tremula x Populus tremuloides mRNA for putative cytosolic CuZn-superoxide dismutase (cyt-SOD1 gene) Length = 851 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagt 311 |||| |||||||||||| | ||| ||||||||||| ||||| Sbjct: 524 ccaataacaccacatgctactctgccaccagcattaccagt 484
>gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, complete sequence Length = 187670 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 acatttatttgataaatttaa 103 ||||||||||||||||||||| Sbjct: 63877 acatttatttgataaatttaa 63857
>gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, complete sequence Length = 154272 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 tggaaacatttatttgataaattta 102 ||||||||||||||| ||||||||| Sbjct: 138957 tggaaacatttatttaataaattta 138933
>dbj|AB190501.1| Populus alba x Populus tremula var. glandulosa CuZn-SOD mRNA for CuZn-superoxide dismutase, complete cds, clone: PO3024C12 Length = 730 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagt 311 |||| |||||||||||| | ||| ||||||||||| ||||| Sbjct: 523 ccaataacaccacatgctactctgccaccagcattaccagt 483
>dbj|AB190500.1| Populus alba x Populus tremula var. glandulosa CuZn-SOD mRNA for CuZn-superoxide dismutase, complete cds, clone: PO3023E02 Length = 725 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagt 311 |||| |||||||||||| | ||| ||||||||||| ||||| Sbjct: 543 ccaataacaccacatgctactctgccaccagcattaccagt 503
>gb|AF426273.1|AF426273 Manihot esculenta copper/zinc superoxide dismutase mRNA, partial cds Length = 242 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagt 311 |||| |||||||||||| | || ||||||||||||||||| Sbjct: 75 ccaataacaccacatgctaccctgccaccagcatttccagt 35
>gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, complete sequence Length = 36235 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 acatttatttgataaatttaa 103 ||||||||||||||||||||| Sbjct: 29767 acatttatttgataaatttaa 29747
>gb|AY642137.1| Manihot esculenta copper/zinc superoxide dismutase mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 271 ccaacaacaccacatgcaagtcttccaccagcatttccagt 311 |||| |||||||||||| | || ||||||||||||||||| Sbjct: 459 ccaataacaccacatgctaccctgccaccagcatttccagt 419
>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence Length = 240997 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 agtcatcttcaagctcatgaa 364 ||||||||||||||||||||| Sbjct: 63686 agtcatcttcaagctcatgaa 63706
>gb|AF037359.1|AF037359 Paulownia kawakamii superoxide dismutase (SOD5) mRNA, complete cds Length = 794 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 accacatgcaagtcttccaccagcatttccagt 311 |||||| |||| ||||||||||| ||||||||| Sbjct: 525 accacaagcaactcttccaccagtatttccagt 493
>emb|CR450734.11| Zebrafish DNA sequence from clone DKEY-53N24 in linkage group 5, complete sequence Length = 73893 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tttgataaatttaactttaca 110 ||||||||||||||||||||| Sbjct: 67430 tttgataaatttaactttaca 67410
>gb|AC167544.9| Mus musculus chromosome 7, clone RP24-255K20, complete sequence Length = 155048 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 agtcatcttcaagctcatgaa 364 ||||||||||||||||||||| Sbjct: 139970 agtcatcttcaagctcatgaa 139990
>gb|AY611485.1| Caenorhabditis elegans epidermal growth factor receptor pathway substrate 8 splice variant B (eps-8) mRNA, complete cds, alternatively spliced Length = 2223 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 733 catcttcaagctcaacaacaacaaatgc 760
>gb|AY611484.1| Caenorhabditis elegans epidermal growth factor receptor pathway substrate 8 splice variant A (eps-8) mRNA, complete cds, alternatively spliced Length = 2754 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 733 catcttcaagctcaacaacaacaaatgc 760
>ref|NM_129570.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G40120 mRNA, complete cds Length = 2041 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 876 tcatcttcaacctcatgaacaaca 853
>gb|AC161435.7| Mus musculus chromosome 8, clone RP23-78L21, complete sequence Length = 219937 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ggggtcaggccaacaacacc 281 |||||||||||||||||||| Sbjct: 138045 ggggtcaggccaacaacacc 138026
>ref|XM_528339.1| PREDICTED: Pan troglodytes similar to concentrative Na+-nucleoside cotransporter (LOC472969), mRNA Length = 2430 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ggagatgcaacaaaaagggt 216 |||||||||||||||||||| Sbjct: 576 ggagatgcaacaaaaagggt 595
>ref|XM_420102.1| PREDICTED: Gallus gallus similar to Canalicular multispecific organic anion transporter 2 (Multidrug resistance-associated protein 3) (Multi-specific organic anion tranporter-D) (MOAT-D) (LOC422099), mRNA Length = 5748 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 caccagcatttccagtactg 315 |||||||||||||||||||| Sbjct: 1873 caccagcatttccagtactg 1892
>ref|XM_455378.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F06578g predicted mRNA Length = 1659 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaagtttggaaacatttatt 91 |||||||||||||||||||| Sbjct: 1271 aaagtttggaaacatttatt 1252
>gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, complete sequence Length = 164107 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aagacaaagtttggaaacat 86 |||||||||||||||||||| Sbjct: 28903 aagacaaagtttggaaacat 28922
>gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosome 19, complete sequence Length = 230596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 accaaaaattctcaagttca 50 |||||||||||||||||||| Sbjct: 212763 accaaaaattctcaagttca 212744
>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence Length = 202404 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gcttcatagctcaacaagacaaag 75 ||||||||||||||||||| |||| Sbjct: 151053 gcttcatagctcaacaagaaaaag 151076
>gb|BT022146.1| Drosophila melanogaster IP01459 full insert cDNA Length = 1057 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atttatttgataaatttaac 104 |||||||||||||||||||| Sbjct: 37 atttatttgataaatttaac 56
>gb|AC107789.7| Mus musculus chromosome 1, clone RP23-409K18, complete sequence Length = 242347 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ttggaaacatttatttgataaatt 100 |||||||||||||||| ||||||| Sbjct: 207176 ttggaaacatttatttcataaatt 207153
>gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete sequence Length = 122915 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 ttcccaagtcatcttcaagctcat 361 ||||||| |||||||||||||||| Sbjct: 4653 ttcccaattcatcttcaagctcat 4630
>ref|NM_022127.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 (SLC28A3), mRNA Length = 2209 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ggagatgcaacaaaaagggt 216 |||||||||||||||||||| Sbjct: 317 ggagatgcaacaaaaagggt 336
>gb|AY675506.1| Paragonimus westermani cytosolic Cu/Zn superoxide dismutase gene, complete cds Length = 470 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttcc 308 |||||||| ||||| | ||||||||||||||| Sbjct: 448 acaccacacgcaagacgtccaccagcatttcc 417
>emb|AL033517.1|HS279I9 Human DNA sequence from clone RP1-279I9 on chromosome 6p24.1-25.3 Contains part of the GMDS gene for GDP-mannose 4 6-dehydratase, complete sequence Length = 111311 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 acaaagtttggaaacattta 89 |||||||||||||||||||| Sbjct: 51509 acaaagtttggaaacattta 51490
>gb|AY070023.1| Arabidopsis thaliana putative protein kinase (At2g40120) mRNA, complete cds Length = 1744 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 677 tcatcttcaacctcatgaacaaca 654
>gb|AY396148.1| Paragonimus westermani SOD (SOD) mRNA, complete cds Length = 698 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 acaccacatgcaagtcttccaccagcatttcc 308 |||||||| ||||| | ||||||||||||||| Sbjct: 457 acaccacacgcaagacgtccaccagcatttcc 426
>gb|AY034921.1| Arabidopsis thaliana putative protein kinase (At2g40120) mRNA, complete cds Length = 1942 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 761 tcatcttcaacctcatgaacaaca 738
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaagtttggaaacatttatt 91 |||||||||||||||||||| Sbjct: 635990 aaagtttggaaacatttatt 635971
>gb|BC093821.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, mRNA (cDNA clone MGC:120856 IMAGE:7939666), complete cds Length = 2122 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ggagatgcaacaaaaagggt 216 |||||||||||||||||||| Sbjct: 254 ggagatgcaacaaaaagggt 273
>gb|AC104626.3| Drosophila melanogaster X BAC RP98-28L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184454 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccaacaacaccacatgcaag 290 |||||||||||||||||||| Sbjct: 39346 ccaacaacaccacatgcaag 39365
>ref|NM_143171.2| Drosophila melanogaster CG4956-RA (CG4956), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atttatttgataaatttaac 104 |||||||||||||||||||| Sbjct: 37 atttatttgataaatttaac 56
>ref|NM_132473.1| Drosophila melanogaster CG15198-RA (CG15198), mRNA Length = 369 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccaacaacaccacatgcaag 290 |||||||||||||||||||| Sbjct: 299 ccaacaacaccacatgcaag 318
>ref|NM_070402.3| Caenorhabditis elegans EPS (human endocytosis) related family member (eps-8) (eps-8) mRNA, complete cds Length = 2557 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 809 catcttcaagctcaacaacaacaaatgc 836
>ref|NM_070403.3| Caenorhabditis elegans EPS (human endocytosis) related family member (eps-8) (eps-8) mRNA, complete cds Length = 2299 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 809 catcttcaagctcaacaacaacaaatgc 836
>ref|NM_070401.3| Caenorhabditis elegans EPS (human endocytosis) related family member (eps-8) (eps-8) mRNA, complete cds Length = 3466 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 809 catcttcaagctcaacaacaacaaatgc 836
>dbj|AK050059.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730009D23 product:weakly similar to PROTEIN KINASE C BETA (FRAGMENT) [Homo sapiens], full insert sequence Length = 3181 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attctttgagcattttatag 21 |||||||||||||||||||| Sbjct: 2621 attctttgagcattttatag 2602
>ref|NM_001028350.2| Caenorhabditis elegans strain Bristol N2 chromosome IV Length = 3208 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 catcttcaagctcatgaacaacaaatgc 374 |||||||||||||| |||||||||||| Sbjct: 809 catcttcaagctcaacaacaacaaatgc 836
>gb|AC008209.5|AC008209 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR06K17, complete sequence Length = 169902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 atttatttgataaatttaac 104 |||||||||||||||||||| Sbjct: 51192 atttatttgataaatttaac 51173
>emb|BX819058.1|CNS0A9UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1999 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 852 tcatcttcaacctcatgaacaaca 829
>emb|BX820127.1|CNS0A842 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2159 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 1010 tcatcttcaacctcatgaacaaca 987
>gb|AC010580.5|AC010580 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR48J06, complete sequence Length = 163970 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 atttatttgataaatttaac 104 |||||||||||||||||||| Sbjct: 121961 atttatttgataaatttaac 121942
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aattctttgagcattttata 20 |||||||||||||||||||| Sbjct: 141496 aattctttgagcattttata 141477
>gb|BC093823.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, mRNA (cDNA clone MGC:120858 IMAGE:7939668), complete cds Length = 2125 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ggagatgcaacaaaaagggt 216 |||||||||||||||||||| Sbjct: 254 ggagatgcaacaaaaagggt 273
>gb|AF305210.1|AF305210 Homo sapiens concentrative Na+-nucleoside cotransporter hCNT3 (CNT3) mRNA, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ggagatgcaacaaaaagggt 216 |||||||||||||||||||| Sbjct: 317 ggagatgcaacaaaaagggt 336
>gb|BT024384.1| Drosophila melanogaster IP05837 full insert cDNA Length = 638 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccaacaacaccacatgcaag 290 |||||||||||||||||||| Sbjct: 432 ccaacaacaccacatgcaag 451
>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence Length = 211987 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 agacaaagtttggaaacatt 87 |||||||||||||||||||| Sbjct: 111881 agacaaagtttggaaacatt 111900
>gb|AC018721.1|AC018721 Arabidopsis thaliana chromosome II section 217 of 255 of the complete sequence. Sequence from clones F27I1, T7M7, T3G21 Length = 57991 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 4257 tcatcttcaacctcatgaacaaca 4280
>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete sequence Length = 249562 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aattctttgagcattttata 20 |||||||||||||||||||| Sbjct: 103229 aattctttgagcattttata 103248
>emb|AL450003.2|HS62F24 Homo sapiens chromosome 9 BAC RP11-62F24, complete sequence Length = 160737 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 75 gtttggaaacatttatttgataaattta 102 ||||||| |||||||| ||||||||||| Sbjct: 33628 gtttggagacatttatatgataaattta 33601
>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19, complete sequence Length = 182182 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tatttgataaatttaacttt 107 |||||||||||||||||||| Sbjct: 2252 tatttgataaatttaacttt 2233
>gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence Length = 95713 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tcatcttcaagctcatgaacaaca 369 |||||||||| ||||||||||||| Sbjct: 1517 tcatcttcaacctcatgaacaaca 1540
>gb|AE003753.3| Drosophila melanogaster chromosome 3R, section 91 of 118 of the complete sequence Length = 226793 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 atttatttgataaatttaac 104 |||||||||||||||||||| Sbjct: 116977 atttatttgataaatttaac 116958
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccaacaacaccacatgcaag 290 |||||||||||||||||||| Sbjct: 162186 ccaacaacaccacatgcaag 162205
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atttgataaatttaacttta 108 |||||||||||||||||||| Sbjct: 61423 atttgataaatttaacttta 61404
>gb|AC119234.10| Mus musculus chromosome 19, clone RP24-211P24, complete sequence Length = 143832 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aagacaaagtttggaaacat 86 |||||||||||||||||||| Sbjct: 20079 aagacaaagtttggaaacat 20060
>gb|AC154274.1| Mus musculus BAC clone RP24-298J16 from 17, complete sequence Length = 150755 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 attctttgagcattttatag 21 |||||||||||||||||||| Sbjct: 150676 attctttgagcattttatag 150695
>emb|AL929194.8| Mouse DNA sequence from clone RP23-385L14 on chromosome 2, complete sequence Length = 120827 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 atgctctcccaacaactgca 390 |||||||||||||||||||| Sbjct: 65617 atgctctcccaacaactgca 65598
>gb|AC151293.2| Mus musculus BAC clone RP23-128F3 from chromosome 17, complete sequence Length = 196596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attctttgagcattttatag 21 |||||||||||||||||||| Sbjct: 169899 attctttgagcattttatag 169880
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gcttcatagctcaacaagacaaag 75 ||||||||||||||||||| |||| Sbjct: 75468 gcttcatagctcaacaagaaaaag 75491 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,561,622 Number of Sequences: 3902068 Number of extensions: 4561622 Number of successful extensions: 144298 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 144039 Number of HSP's gapped (non-prelim): 256 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)