ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet68h08 |
|---|---|
| Clone Library Name | barley_pub |
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 137 bits (346), Expect = 9e-33 Identities = 60/91 (65%), Positives = 75/91 (82%) Frame = -1 Query: 420 LVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPK 241 +++ R V LLP R+AFKGT IA+GGY + +G+KA+ YADL+SFGR+FLANPDLPK Sbjct: 261 VMEPRETVNRSLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPK 320 Query: 240 RLELNAPLNKYNRMTFYISDPVVGYTDYPFL 148 R E+NAPLNKYNR TFY +DP++GYTDYPFL Sbjct: 321 RFEVNAPLNKYNRSTFYTNDPIIGYTDYPFL 351
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 136 bits (343), Expect = 2e-32 Identities = 65/97 (67%), Positives = 76/97 (78%) Frame = -1 Query: 438 IEPRMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLA 259 IEPRM V H L+P REAFKGTFI+ GG+ RE+G++AV+ G DLV++GR FLA Sbjct: 274 IEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLA 333 Query: 258 NPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 148 NPDLPKR +L+APLNKYNR TFY SDPVVGYTDYP L Sbjct: 334 NPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 135 bits (339), Expect = 6e-32 Identities = 63/97 (64%), Positives = 77/97 (79%) Frame = -1 Query: 438 IEPRMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLA 259 IE RM + PH L+P R+AFKGTFI+ GG+ RE+G++AVS G DLV++GR FLA Sbjct: 272 IEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLA 331 Query: 258 NPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 148 NPDLPKR +++APLNKY+R TFY SDPVVGYTDYPFL Sbjct: 332 NPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFL 368
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 134 bits (336), Expect = 1e-31 Identities = 62/97 (63%), Positives = 76/97 (78%) Frame = -1 Query: 438 IEPRMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLA 259 +EPRM + L+P R+A+KGTFI GGYDRE+G++A+ ADLV++GRLF++ Sbjct: 276 VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFIS 335 Query: 258 NPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 148 NPDLPKR ELNAPLNKYNR TFY SDP+VGYTDYPFL Sbjct: 336 NPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFL 372
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 117 bits (292), Expect = 2e-26 Identities = 54/76 (71%), Positives = 64/76 (84%) Frame = -1 Query: 375 REAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMT 196 R A++GTFI +GGY RE G +AV+ G ADLVS+GRLF++NPDL R++LNAPLNKYNR T Sbjct: 309 RNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKT 368 Query: 195 FYISDPVVGYTDYPFL 148 FY DPVVGYTDYPFL Sbjct: 369 FYTQDPVVGYTDYPFL 384
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 106 bits (264), Expect = 3e-23 Identities = 48/76 (63%), Positives = 61/76 (80%) Frame = -1 Query: 375 REAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMT 196 R A+ GTF+++GG+++E G +AV G ADLVS+GRLF+ANPDL R +++ LNKYNR T Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369 Query: 195 FYISDPVVGYTDYPFL 148 FY DPVVGYTDYPFL Sbjct: 370 FYTQDPVVGYTDYPFL 385
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 97.1 bits (240), Expect = 2e-20 Identities = 49/76 (64%), Positives = 54/76 (71%) Frame = -1 Query: 438 IEPRMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLA 259 IEPRM V L P R AF GTFI GGY RE+G+KAV+ G DLV++GRLFLA Sbjct: 249 IEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLA 308 Query: 258 NPDLPKRLELNAPLNK 211 NPDLPKR ELNAPLNK Sbjct: 309 NPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 72.4 bits (176), Expect = 5e-13 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Frame = -1 Query: 384 LPYREAFKGTFIANGGYDREEGDKAVSSGYAD--LVSFGRLFLANPDLPKRLELNAPLNK 211 L Y+ + FI GG+DR D A+ + LV+FGR FL+NPDLP RL+ N PLNK Sbjct: 305 LIYKNLWGDPFITAGGHDR---DSAIQMAEQENTLVAFGRYFLSNPDLPFRLKYNLPLNK 361 Query: 210 YNRMTFYISDPVVGYTDYPF 151 ++R TFY GY DYPF Sbjct: 362 WDRATFYTKMSPKGYIDYPF 381
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 70.9 bits (172), Expect = 1e-12 Identities = 36/72 (50%), Positives = 48/72 (66%) Frame = -1 Query: 366 FKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMTFYI 187 +KG FI GGYD E +A + LV+FGR F+ANPDL R++ + PLNK++R +FY+ Sbjct: 304 WKGPFITAGGYDPETAVQAANERGV-LVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYL 362 Query: 186 SDPVVGYTDYPF 151 GYTDYPF Sbjct: 363 PKTEKGYTDYPF 374
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 58.9 bits (141), Expect = 5e-09 Identities = 32/76 (42%), Positives = 40/76 (52%) Frame = -1 Query: 375 REAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMT 196 R F G I G Y E+ + + G D V+FGR ++ANPDL RL+ A LN + Sbjct: 291 RARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAES 350 Query: 195 FYISDPVVGYTDYPFL 148 FY GYTDYP L Sbjct: 351 FY-GGGAEGYTDYPTL 365
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 55.8 bits (133), Expect = 4e-08 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -1 Query: 288 LVSFGRLFLANPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 154 L+ +GR F++NPDL RLE PLNKY+R TFY GYTDYP Sbjct: 343 LIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 53.1 bits (126), Expect = 3e-07 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Frame = -1 Query: 366 FKGTFIANGGYDREEGDKAV--SSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMTF 193 +KG + G Y + D A+ S L+ +GR F+ANPDL +RLE PLN+Y+R +F Sbjct: 316 WKGNVLRVGNYALDP-DAAITDSKNPNTLIGYGRAFIANPDLVERLEKGLPLNQYDRPSF 374 Query: 192 YISDPVVGYTDYP 154 Y GY DYP Sbjct: 375 Y-KMSAEGYIDYP 386
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 52.8 bits (125), Expect = 4e-07 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -1 Query: 288 LVSFGRLFLANPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 154 L+ +GR F++NPDL RLE PLNKY+R TFY GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFY-KMSAEGYIDYP 386
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 52.4 bits (124), Expect = 5e-07 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -1 Query: 288 LVSFGRLFLANPDLPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 154 L+ +GR F++NPDL RLE PLNKY+R TFY GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFY-QMSAHGYIDYP 386
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = -1 Query: 366 FKGTFIANGGY--DREEGDKAVSSGYAD--LVSFGRLFLANPDLPKRLELNAPLNKYNRM 199 +KG FI G Y D E ++ D ++ F R F +NPDL ++L+L PLN YNR Sbjct: 321 WKGNFIRAGNYTYDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNRE 380 Query: 198 TFY 190 FY Sbjct: 381 EFY 383
>DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (TMADh)| Length = 729 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = -1 Query: 375 REAFKGTFIANGGY-DREEGDKAVSSGYADLVSFGRLFLANPDLPKRLE 232 ++ K + G Y D E+ + V+ GYAD++ R +A+P LP+++E Sbjct: 287 KQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -2 Query: 437 SSPVWHSST--AGGWCRTGCCPTGRPS-RAPSLQMVGMIG 327 SS WHS T A GW G CP R S R P L ++G Sbjct: 1525 SSQSWHSGTPTAVGWGAEGACPYPRGSERRPELDWRDLLG 1564
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = -1 Query: 327 EEGDKAVSSGYADLVSFGRLFLANPDLPKR 238 E +K ++ G AD V+ GR +A+P+ PK+ Sbjct: 303 EFAEKIIAEGRADFVAVGRGLIADPEWPKK 332
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = -1 Query: 372 EAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLANPDLPKRLELNAPLNKYNRMTF 193 EAFKGT+ A+ Y+ + A G L FG L LA+ PL++ + F Sbjct: 499 EAFKGTYEADASYNCTASEGAAGRGI--LGPFGILVLADD----------PLSELTPVYF 546 Query: 192 YISDPVVG 169 YI+ V G Sbjct: 547 YIAKGVDG 554
>GVPC_HALME (Q02228) Gas vesicle protein C| Length = 381 Score = 28.5 bits (62), Expect = 7.6 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Frame = -1 Query: 414 DGRRVVPHRLLPYREAFKGTFIAN-----GGYDREEGD--KAVSSGYADLVSFGRLFLAN 256 DG + V L YRE F G + + + RE GD KA + SF R F Sbjct: 186 DGHKDVADAFLQYREEFHGVEVQSLLDNIAAFQREMGDYRKAFETTEEAFASFARDFYGQ 245 Query: 255 PDLPKRLELN 226 P LN Sbjct: 246 GAAPMATPLN 255
>ARGC_SILPO (Q5LS92) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 342 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = +1 Query: 301 RGDRLVPLFPIIPTICNEGALEGLPVGQQPVRHHPPAVDECHTGL 435 RGD + +E + LP G+ P HH + CH G+ Sbjct: 249 RGDAQTVFQTLAAAYADEPFVHVLPFGETPSTHHVRGSNHCHIGV 293
>PTTBC_BACSU (P39794) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 470 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -1 Query: 429 RMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLV 283 R AL+D +V +L + KG+F NG + G V+ YA+LV Sbjct: 32 RFALIDESKV-DQEMLDQIDVVKGSFSTNGQFQVVIGQGTVNKVYAELV 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,290,176 Number of Sequences: 219361 Number of extensions: 1036457 Number of successful extensions: 2974 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2971 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
