| Clone Name | rbaet68h06 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLKP 336 DTK++D+ KFGL+L LKP Sbjct: 257 DTKSVDKGAKFGLALALKP 275
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLKP 336 DTKA++++ K GLSL LKP Sbjct: 257 DTKAIEKSAKIGLSLALKP 275
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLKP 336 DTK++D++ K GL+L LKP Sbjct: 257 DTKSIDKSAKVGLALALKP 275
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLK 339 DTKA++++ K GLSLVLK Sbjct: 259 DTKAIEKSTKVGLSLVLK 276
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/19 (52%), Positives = 16/19 (84%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLKP 336 DTKA+D++ K G+++ LKP Sbjct: 255 DTKAIDKSSKVGIAVALKP 273
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/19 (52%), Positives = 16/19 (84%) Frame = -1 Query: 392 DTKALDRAPKFGLSLVLKP 336 D+KA+D++ K G++L LKP Sbjct: 255 DSKAIDKSAKVGIALALKP 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,180,313 Number of Sequences: 219361 Number of extensions: 1088661 Number of successful extensions: 2063 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2043 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2063 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)