>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/152 (81%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                           
Query: 241     aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 300
               |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 5316807 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 5316864

                                                                           
Query: 301     tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 360
                 || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 5316865 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 5316924

                                               
Query: 361     aacttgggtgctctgtccaaggccttggtgtc 392
               |||||||| | |||||||||||||||||||||
Sbjct: 5316925 aacttggggggtctgtccaaggccttggtgtc 5316956

>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/152 (81%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                         
Query: 241   aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 300
             |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 22975 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 23032

                                                                         
Query: 301   tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 360
               || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 23033 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 23092

                                             
Query: 361   aacttgggtgctctgtccaaggccttggtgtc 392
             |||||||| | |||||||||||||||||||||
Sbjct: 23093 aacttggggggtctgtccaaggccttggtgtc 23124

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/152 (81%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                           
Query: 241     aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 300
               |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 5316022 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 5316079

                                                                           
Query: 301     tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 360
                 || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 5316080 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 5316139

                                               
Query: 361     aacttgggtgctctgtccaaggccttggtgtc 392
               |||||||| | |||||||||||||||||||||
Sbjct: 5316140 aacttggggggtctgtccaaggccttggtgtc 5316171

>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0006P09, complete sequence
          Length = 153950

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/152 (81%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                         
Query: 241   aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 300
             |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 37956 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 38013

                                                                         
Query: 301   tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 360
               || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 38014 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 38073

                                             
Query: 361   aacttgggtgctctgtccaaggccttggtgtc 392
             |||||||| | |||||||||||||||||||||
Sbjct: 38074 aacttggggggtctgtccaaggccttggtgtc 38105

>dbj|AK121020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E21, full
            insert sequence
          Length = 1265

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/152 (81%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 241  aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 300
            |||| ||||||||||||||||||||||||| ||||  |  |||| ||||||||||| |||
Sbjct: 1052 aacaggtctgcggaacaaattattggccattgctttgc--aaaacaaccaaagaattcga 995

                                                                        
Query: 301  tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 360
              || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 994  aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 935

                                            
Query: 361  aacttgggtgctctgtccaaggccttggtgtc 392
            |||||||| | |||||||||||||||||||||
Sbjct: 934  aacttggggggtctgtccaaggccttggtgtc 903

>gb|AY823551.1| Pennisetum glaucum voltage dependent anion channel protein mRNA,
           complete cds
          Length = 1025

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 324 atgatctcatcagggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggc 383
           |||||||  ||||||||| ||| | |||| ||| ||||||||||| || ||||||| |||
Sbjct: 843 atgatctggtcagggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggc 784

                    
Query: 384 cttggtgtc 392
           |||||||||
Sbjct: 783 cttggtgtc 775

>gb|AY823552.1| Pennisetum glaucum voltage dependent anion channel protein gene,
            complete cds
          Length = 2967

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 333  tcagggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggccttggtgtc 392
            ||||||||| ||| | |||| ||| ||||||||||| || ||||||| ||||||||||||
Sbjct: 2967 tcagggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggccttggtgtc 2908

>gb|AY224468.1| Oryza sativa (japonica cultivar-group) isolate 24162 porin-like
           protein mRNA, complete cds
          Length = 834

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 358 ccaaacttgggtgctctgtccaaggccttggtgtc 392
           ||||||||||| | |||||||||||||||||||||
Sbjct: 809 ccaaacttggggggtctgtccaaggccttggtgtc 775

>gb|AF513381.1| Pennisetum glaucum PgPOR29 (PORIN) mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 831

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 336 gggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggccttggtgtc 392
           |||||| ||| | |||| ||| ||||||||||| || ||||||| ||||||||||||
Sbjct: 831 gggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggccttggtgtc 775

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     ggcctatcggatcctgccca 209
               ||||||||||||||||||||
Sbjct: 2184527 ggcctatcggatcctgccca 2184546

>gb|AC149071.3| Xenopus tropicalis BAC clone ISB10250N9 containing the Irx4 gene,
            complete cds, complete sequence
          Length = 84437

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  catagcttcacaaaaaataa 287
            ||||||||||||||||||||
Sbjct: 7132 catagcttcacaaaaaataa 7151

>gb|AC144794.2| Mus musculus BAC clone RP24-463B6 from chromosome 18, complete sequence
          Length = 152588

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   tggataaaatcccaggtgaa 189
             ||||||||||||||||||||
Sbjct: 13293 tggataaaatcccaggtgaa 13274

>gb|AC123950.3| Mus musculus BAC clone RP23-162I9 from chromosome 18, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tggataaaatcccaggtgaa 189
             ||||||||||||||||||||
Sbjct: 38654 tggataaaatcccaggtgaa 38673

>ref|XM_383886.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03710.1)
            partial mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  attattggccatagcttcac 278
            ||||||||||||||||||||
Sbjct: 1272 attattggccatagcttcac 1253

>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    gctctgtccaaggccttggt 389
              ||||||||||||||||||||
Sbjct: 140676 gctctgtccaaggccttggt 140695

>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  caaattattggccatagctt 275
            ||||||||||||||||||||
Sbjct: 6786 caaattattggccatagctt 6805

>ref|XM_815392.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508165.170) partial mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 37  aaatcaatcaacaccgcatgaaaaatca 64
           ||||||||||| |||||||||| |||||
Sbjct: 333 aaatcaatcaataccgcatgaacaatca 360

>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence
          Length = 255062

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    gctctgtccaaggccttggt 389
              ||||||||||||||||||||
Sbjct: 212000 gctctgtccaaggccttggt 211981

>ref|XM_649330.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (54.t00042)
            partial mRNA
          Length = 4962

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcaaatgtagcttcttcaa 80
            ||||||||||||||||||||
Sbjct: 1257 atcaaatgtagcttcttcaa 1238

>emb|AL133466.22| Human DNA sequence from clone RP5-831C21 on chromosome 20 Contains the
             GGTLA4 gene for gamma-glutamyltransferase-like activity 4,
             the 5' end of a novel protein similar to gamma-glutamyl
             transpeptidase-related protein (GGT-Rel) and the POM121L3
             gene for POM121 membrane glycoprotein-like 3 (rat),
             complete sequence
          Length = 117890

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gaactcacagtaaaaagaaa 127
             ||||||||||||||||||||
Sbjct: 91594 gaactcacagtaaaaagaaa 91575

>emb|AL389890.1|NCB24P7 Neurospora crassa DNA linkage group I BAC clone B24P7
          Length = 77715

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gggatagctactcggaactc 113
             ||||||||||||||||||||
Sbjct: 32740 gggatagctactcggaactc 32759

>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete
              sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    caaacttgggtgctctgtcc 378
              ||||||||||||||||||||
Sbjct: 127167 caaacttgggtgctctgtcc 127148

>dbj|AK137841.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130024G16 product:demethyl-Q 7, full
            insert sequence
          Length = 3071

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  gctctgtccaaggccttggt 389
            ||||||||||||||||||||
Sbjct: 1265 gctctgtccaaggccttggt 1284

>gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, complete sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     aagtaacagactactgggat 98
              ||||||||||||||||||||
Sbjct: 133121 aagtaacagactactgggat 133102

>gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, complete sequence
          Length = 216977

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   atttaacagaacatgtctgc 251
             ||||||||||||||||||||
Sbjct: 73587 atttaacagaacatgtctgc 73568

>gb|AC005670.1|AC005670 Homo sapiens chromosome 17, clone hRPK.63_A_1, complete sequence
          Length = 147902

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   atagcttcacaaaaaataac 288
             ||||||||||||||||||||
Sbjct: 58090 atagcttcacaaaaaataac 58071

>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021,
             complete sequence
          Length = 83700

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tagcggtaaaatcaatcaac 48
             ||||||||||||||||||||
Sbjct: 16750 tagcggtaaaatcaatcaac 16769

>emb|AL672210.14| Mouse DNA sequence from clone RP23-44A17 on chromosome X, complete
             sequence
          Length = 110996

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    acagactactgggatagcta 103
             ||||||||||||||||||||
Sbjct: 35826 acagactactgggatagcta 35807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,975,552
Number of Sequences: 3902068
Number of extensions: 3975552
Number of successful extensions: 78175
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78082
Number of HSP's gapped (non-prelim): 93
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)