| Clone Name | rbaet68f09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SDK1_CHICK (Q8AV58) Protein sidekick-1 precursor | 28 | 7.7 | 2 | CYB_NUMME (Q35160) Cytochrome b | 28 | 7.7 |
|---|
>SDK1_CHICK (Q8AV58) Protein sidekick-1 precursor| Length = 2169 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 242 HRECSSDEKKSATRVVITTQNQHGAHIRTPDSQP 343 + ECS+ E + + VITTQ+ G + TP QP Sbjct: 2123 YEECSASETEPYFQTVITTQSSGGVY--TPTGQP 2154
>CYB_NUMME (Q35160) Cytochrome b| Length = 380 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/55 (25%), Positives = 24/55 (43%) Frame = -1 Query: 366 MPSPK*STGWLSGVRMCAPCWFCVVITTLVALFFSSLEHSLCMFQVQEVCTGVTY 202 +P+P + W + + A C+ +IT L+ + + SL V C V Y Sbjct: 22 LPTPSNISAWWNFGSLLAVCFMTQIITGLLLAMHYTADTSLAFSSVAHTCRNVQY 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,728,161 Number of Sequences: 219361 Number of extensions: 1170308 Number of successful extensions: 3182 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3182 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)