| Clone Name | rbaet68e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transporter 6 (Pht1-6) gene, complete cds Length = 2876 Score = 735 bits (371), Expect = 0.0 Identities = 396/402 (98%), Gaps = 3/402 (0%) Strand = Plus / Minus Query: 1 cgaccataaactctaattaattaatta--acatggagaactctgacacatgacaatagta 58 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2714 cgaccataaactctaattaattaattataacatggagaactctgacacatgacaatagta 2655 Query: 59 gtattgttgttgtactcgactcctgagttgaacgtcccaaccaagaaaaagaaaacaccc 118 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2654 gtattgttgttgtactc-actcctgagttgaacgtcccaaccaagaaaaagaaaacaccc 2596 Query: 119 atacatccatccaaacctgcagagtataccaccggtagcatatgctagtatatctgacgt 178 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2595 atacatccatccaaacctgcagagtataccaccggtagcatatactagtatatctgacgt 2536 Query: 179 acggcgacgcctcacacgggcaccgtcctggcgtgcgtcgccggcgccggcgactcgtcg 238 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2535 acggcgacgtctcacacgggcaccgtcctggcgtgcgtcgccggcgccggcgcctcgtcg 2476 Query: 239 tcgttctcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2475 tcgttctcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtg 2416 Query: 299 aaggccatgccgaggaagttgcaggcggcgaggatgaatagcgagttcttgaccccgatg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 aaggccatgccgaggaagttgcaggcggcgaggatgaatagcgagttcttgaccccgatg 2356 Query: 359 ccggccttgtacccgtggtccaccttgctggggtcctggttc 400 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 ccggccttgtacccgtggtccaccttgctggggtcctggttc 2314
>ref|XM_474702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1617 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1553 tcgtcctcgttctcgccggagagctcctccagcga 1519
>gb|AF536964.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT4 gene, complete cds Length = 1925 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1553 tcgtcctcgttctcgccggagagctcctccagcga 1519
>gb|AF493789.1| Oryza sativa phosphate transporter (Pht1-2) mRNA, complete cds Length = 1617 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1553 tcgtcctcgttctcgccggagagctcctccagcga 1519
>gb|AF493788.1| Oryza sativa phosphate transporter (Pht1-2) gene, complete cds Length = 2510 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 2334 tcgtcctcgttctcgccggagagctcctccagcga 2300
>gb|AF416722.1|AF416722 Oryza sativa subsp. indica phosphate transporter (OsPT1) mRNA, complete cds Length = 1830 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1553 tcgtcctcgttctcgccggagagctcctccagcga 1519
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 5813829 tcgtcctcgttctcgccggagagctcctccagcga 5813795 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 239 tcgttctcgccggagagctcctcgagcga 267 ||||||||||||||||||||||| ||||| Sbjct: 5776348 tcgttctcgccggagagctcctccagcga 5776376 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 22410245 gcgtcgccggcgccggcgac 22410264
>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12, complete sequence Length = 164425 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 108815 tcgtcctcgttctcgccggagagctcctccagcga 108781 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 239 tcgttctcgccggagagctcctcgagcga 267 ||||||||||||||||||||||| ||||| Sbjct: 71334 tcgttctcgccggagagctcctccagcga 71362
>gb|AY569609.1| Oryza sativa (japonica cultivar-group) phosphate transporter 4 mRNA, complete cds Length = 1749 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1553 tcgtcctcgttctcgccggagagctcctccagcga 1519
>dbj|AK101380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036E12, full insert sequence Length = 2846 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 2704 tcgtcctcgttctcgccggagagctcctccagcga 2670
>dbj|AK063990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E03, full insert sequence Length = 2047 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 233 tcgtcgtcgttctcgccggagagctcctcgagcga 267 ||||| ||||||||||||||||||||||| ||||| Sbjct: 1763 tcgtcctcgttctcgccggagagctcctccagcga 1729
>gb|AY974043.1| Zea mays inorganic phosphate transporter 3 mRNA, complete cds Length = 2096 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Minus Query: 236 tcgtcgttctcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaag 295 ||||||||||||||||| | |||||| || || |||| |||||||| ||| | ||| Sbjct: 1646 tcgtcgttctcgccggacatctcctccagggatttgcccttggactccggcaccaggaac 1587 Query: 296 gtgaaggccatgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 ||||| |||| ||| || | ||||||| ||||||||| ||| |||||||| Sbjct: 1586 gtgaatgccaggcccagcaggttgcagccggcgaggaggaacagcgagtt 1537
>gb|AY108469.1| Zea mays PCO103837 mRNA sequence Length = 2100 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Minus Query: 236 tcgtcgttctcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaag 295 ||||||||||||||||| | |||||| || || |||| |||||||| ||| | ||| Sbjct: 1651 tcgtcgttctcgccggacatctcctccagggatttgcccttggactccggcaccaggaac 1592 Query: 296 gtgaaggccatgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 ||||| |||| ||| || | ||||||| ||||||||| ||| |||||||| Sbjct: 1591 gtgaatgccaggcccagcaggttgcagccggcgaggaggaacagcgagtt 1542
>ref|XM_474698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 tcgttctcgccggagagctcctcgagcga 267 ||||||||||||||||||||||| ||||| Sbjct: 1574 tcgttctcgccggagagctcctccagcga 1546
>gb|AF536965.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT5 gene, complete cds Length = 2199 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 tcgttctcgccggagagctcctcgagcga 267 ||||||||||||||||||||||| ||||| Sbjct: 1565 tcgttctcgccggagagctcctccagcga 1537
>gb|AY569610.1| Oryza sativa (japonica cultivar-group) phosphate transporter 5 mRNA, complete cds Length = 1722 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 tcgttctcgccggagagctcctcgagcga 267 ||||||||||||||||||||||| ||||| Sbjct: 1574 tcgttctcgccggagagctcctccagcga 1546
>gb|AY974044.1| Zea mays inorganic phosphate transporter 4 mRNA, complete cds Length = 1884 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 256 ctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggccatgccgaggaa 315 |||||||||||| |||| |||||||| ||| || ||| |||| | | | |||||| | Sbjct: 1627 ctcctcgagcgacttgcccttggactccggcacgaggaacgtgaggacgaagccgagcat 1568 Query: 316 gttgcaggcggcgaggatgaatagcgagtt 345 ||||| ||||||||||| ||| |||||||| Sbjct: 1567 gttgctggcggcgaggacgaagagcgagtt 1538
>gb|AY974042.1| Zea mays inorganic phosphate transporter 2 mRNA, complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 256 ctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggccatgccgaggaa 315 |||||||||||| |||| |||||||| ||| || ||| |||| | | | |||||| | Sbjct: 1593 ctcctcgagcgacttgcccttggactccggcacgaggaacgtgaggacgaagccgagcat 1534 Query: 316 gttgcaggcggcgaggatgaatagcgagtt 345 ||||| ||||||||||| ||| |||||||| Sbjct: 1533 gttgctggcggcgaggacgaagagcgagtt 1504
>gb|AY108238.1| Zea mays PCO103838 mRNA sequence Length = 2079 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 256 ctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggccatgccgaggaa 315 |||||||||||| |||| |||||||| ||| || ||| |||| | | | |||||| | Sbjct: 1832 ctcctcgagcgacttgcccttggactccggcacgaggaacgtgaggacgaagccgagcat 1773 Query: 316 gttgcaggcggcgaggatgaatagcgagtt 345 ||||| ||||||||||| ||| |||||||| Sbjct: 1772 gttgctggcggcgaggacgaagagcgagtt 1743
>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete sequence Length = 173254 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 gaaaaagaaaacacccatacat 124 |||||||||||||||||||||| Sbjct: 100423 gaaaaagaaaacacccatacat 100444
>ref|XM_483816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 1585 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 1526 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 1525 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 1485
>gb|AC159421.1| Trypanosoma brucei chromosome 7 clone RPCI93-26A24, complete sequence Length = 158050 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 aagaaaaagaaaacacccata 121 ||||||||||||||||||||| Sbjct: 129907 aagaaaaagaaaacacccata 129927
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 aagaaaaagaaaacacccata 121 ||||||||||||||||||||| Sbjct: 1180216 aagaaaaagaaaacacccata 1180196
>gb|AC102413.8| Mus musculus chromosome 3, clone RP24-462F18, complete sequence Length = 181851 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 attaacatggagaactctgac 44 ||||||||||||||||||||| Sbjct: 94622 attaacatggagaactctgac 94642
>gb|AF335588.2| Oryza sativa (japonica cultivar-group) phosphate transporter mRNA, complete cds Length = 1634 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 1576 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 1517 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 1516 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 1476
>gb|AF543197.1| Hordeum vulgare subsp. vulgare phosphate transporter 1 (Pht1-1) gene, complete cds Length = 3202 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 250 ggagagctcctcgagcgagatgccgttggactc 282 |||||||||||||||||| |||| |||||||| Sbjct: 2930 ggagagctcctcgagcgacttgcccttggactc 2898
>gb|AF536966.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT6 gene, complete cds Length = 1740 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 1556 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 1497 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 1496 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 1456
>emb|AJ579650.1|STE579650 Streptomyces tenebrarius tobramycin biosynthetic gene cluster, strain ATCC 17920 Length = 13802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 cgtcgccggcgccggcgactc 234 ||||||||||||||||||||| Sbjct: 5030 cgtcgccggcgccggcgactc 5050
>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21, complete sequence Length = 168569 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccatacatccatccaaacctg 137 ||||||||||||||||||||| Sbjct: 10221 ccatacatccatccaaacctg 10201
>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21, complete sequence Length = 179432 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ccatacatccatccaaacctg 137 ||||||||||||||||||||| Sbjct: 46583 ccatacatccatccaaacctg 46563
>gb|AY100468.1| Oryza sativa (indica cultivar-group) putative high-affinity phosphate transporter HAPT mRNA, complete cds Length = 1605 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 1556 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 1497 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 1496 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 1456
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 28238544 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 28238485 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 28238484 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 28238444 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 14702272 gcgtcgccggcgccggcgac 14702291 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 5339869 gcgtcgccggcgccggcgac 5339850
>gb|DQ022843.1| Triticum aestivum NAC domain transcription factor (NAC69-3) mRNA, complete cds Length = 1335 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 cgccggcgccggcgactcgtcgtcg 241 |||||||||||||| |||||||||| Sbjct: 788 cgccggcgccggcgcctcgtcgtcg 812
>gb|AY187020.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT2 mRNA, complete cds Length = 1799 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 250 ggagagctcctcgagcgagatgccgttggactc 282 |||||||||||||||||| |||| |||||||| Sbjct: 1561 ggagagctcctcgagcgacttgcccttggactc 1529
>gb|AY188394.1| Hordeum vulgare subsp. vulgare phosphate transporter PT1 (HORvu;Pht1;1) mRNA, complete cds Length = 1833 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 250 ggagagctcctcgagcgagatgccgttggactc 282 |||||||||||||||||| |||| |||||||| Sbjct: 1561 ggagagctcctcgagcgacttgcccttggactc 1529
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 30359 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 30300 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 30299 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 30259
>emb|AL671992.5| Mouse DNA sequence from clone RP23-338G1 on chromosome X, complete sequence Length = 213940 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcccaaccaagaaaaagaaaa 113 ||||||||||||||||||||| Sbjct: 46158 tcccaaccaagaaaaagaaaa 46138
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 122017 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 121958 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 121957 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 121917
>dbj|AK119787.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D01, full insert sequence Length = 1827 Score = 42.1 bits (21), Expect = 1.4 Identities = 81/101 (80%) Strand = Plus / Minus Query: 245 tcgccggagagctcctcgagcgagatgccgttggactcgggcgcgcagaaggtgaaggcc 304 |||||||| | |||||| ||||| | || |||||||| ||| || |||||||||| | Sbjct: 1585 tcgccggacatctcctccagcgacttccccttggactccggcacgaggaaggtgaagagc 1526 Query: 305 atgccgaggaagttgcaggcggcgaggatgaatagcgagtt 345 | ||| || | ||||||||||||||| | ||| |||||||| Sbjct: 1525 aggcccagcaggttgcaggcggcgagcaggaagagcgagtt 1485
>gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, complete sequence Length = 240367 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 attaacatggagaactctgac 44 ||||||||||||||||||||| Sbjct: 28307 attaacatggagaactctgac 28287
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 cgtcgccggcgccggcgactc 234 ||||||||||||||||||||| Sbjct: 26541 cgtcgccggcgccggcgactc 26521
>emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chromosome 4, complete sequence Length = 150897 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcccaaccaagaaaaagaaaa 113 ||||||||||||||||||||| Sbjct: 31050 tcccaaccaagaaaaagaaaa 31070
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 atgccgaggaagttgcaggcggcg 328 |||||||||| ||||||||||||| Sbjct: 849736 atgccgaggaggttgcaggcggcg 849759
>ref|XM_481686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 395 gcgtcgccggcgccggcgac 376
>ref|XM_480475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 960 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 632 gcgtcgccggcgccggcgac 651
>ref|XM_464091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 582 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 526 gcgtcgccggcgccggcgac 507
>ref|NM_192441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 1530 ctcgccggagatctcctcgagcga 1507
>ref|XM_472662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 79 gcgtcgccggcgccggcgac 98
>ref|XM_958428.1| Neurospora crassa OR74A hypothetical protein (NCU06749.1) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gaagttgcaggcggcgagga 332 |||||||||||||||||||| Sbjct: 1023 gaagttgcaggcggcgagga 1042
>ref|XM_327034.1| Neurospora crassa OR74A hypothetical protein (NCU06749.1) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gaagttgcaggcggcgagga 332 |||||||||||||||||||| Sbjct: 1023 gaagttgcaggcggcgagga 1042
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gtcgttctcgccggagagct 257 |||||||||||||||||||| Sbjct: 878433 gtcgttctcgccggagagct 878414
>emb|BX470177.14| Zebrafish DNA sequence from clone DKEY-31F3 in linkage group 3, complete sequence Length = 59444 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaagaaaacacccataca 123 |||||||||||||||||||| Sbjct: 51280 aaaaagaaaacacccataca 51261
>gb|AC126442.4| Mus musculus BAC clone RP23-453M12 from chromosome 7, complete sequence Length = 204287 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 taattaattaattaacatgg 33 |||||||||||||||||||| Sbjct: 16774 taattaattaattaacatgg 16793
>gb|AC146073.2| Pan troglodytes BAC clone RP43-15A16 from 7, complete sequence Length = 138338 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tggagaactctgacacatga 50 |||||||||||||||||||| Sbjct: 22370 tggagaactctgacacatga 22389
>ref|XM_757903.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0871) partial mRNA Length = 1989 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccaaccaagaaaaagaaaa 113 |||||||||||||||||||| Sbjct: 1256 cccaaccaagaaaaagaaaa 1275
>ref|XM_757913.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0881) partial mRNA Length = 1707 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccaaccaagaaaaagaaaa 113 |||||||||||||||||||| Sbjct: 980 cccaaccaagaaaaagaaaa 999
>ref|XM_757916.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0884) partial mRNA Length = 1989 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccaaccaagaaaaagaaaa 113 |||||||||||||||||||| Sbjct: 1256 cccaaccaagaaaaagaaaa 1275
>ref|XM_758552.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0010) partial mRNA Length = 1437 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccaaccaagaaaaagaaaa 113 |||||||||||||||||||| Sbjct: 710 cccaaccaagaaaaagaaaa 729
>gb|AF536971.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT11 gene, complete cds Length = 2080 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 1622 ctcgccggagatctcctcgagcga 1599
>gb|AF536960.1| Oryza sativa (japonica cultivar-group) high affinity phosphate transporter 11 mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 1530 ctcgccggagatctcctcgagcga 1507
>emb|AL033521.2|HS444C7 Human DNA sequence from clone RP3-444C7 on chromosome 6p22.3-23 Contains the 5' end of a novel gene (FLJ20342), complete sequence Length = 128270 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 taattaattaattaacatggagaa 37 ||||||||||||||| |||||||| Sbjct: 100871 taattaattaattaagatggagaa 100894
>emb|BX284751.1|NCB24N11 Neurospora crassa DNA linkage group II BAC contig B24N11 Length = 129306 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gaagttgcaggcggcgagga 332 |||||||||||||||||||| Sbjct: 73429 gaagttgcaggcggcgagga 73448
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the 3' end of the Col23a1 gene for procollagen (type XXIII, alpha 1), the 5' end of a novel gene and a CpG island, complete sequence Length = 155917 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aactctaattaattaattaa 28 |||||||||||||||||||| Sbjct: 44905 aactctaattaattaattaa 44924
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 14000 gcgtcgccggcgccggcgac 14019
>emb|AL645571.18| Mouse DNA sequence from clone RP23-39H1 on chromosome 11 Contains a general transcription factor II A, 1 (Gtf2a1) pseudogene, the 3' end of the Pkd1l1 gene for polycystic kidney disease 1 like 1 and a heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3) pseudogene, complete sequence Length = 235198 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaagaaaacacccataca 123 |||||||||||||||||||| Sbjct: 106194 aaaaagaaaacacccataca 106175
>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3, complete sequence Length = 197042 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aaaaagaaaacacccataca 123 |||||||||||||||||||| Sbjct: 23219 aaaaagaaaacacccataca 23238
>emb|BX629355.3|CNS09SBR Tetraodon nigroviridis Length = 128373 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 accaagaaaaagaaaacacc 117 |||||||||||||||||||| Sbjct: 86695 accaagaaaaagaaaacacc 86714
>gb|AC008751.7| Homo sapiens chromosome 19 clone CTD-2623H2, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 caaccaagaaaaagaaaaca 115 |||||||||||||||||||| Sbjct: 30789 caaccaagaaaaagaaaaca 30770
>gb|AF493787.1| Oryza sativa phosphate transporter (Pht1-1) gene, complete cds Length = 5543 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 5015 ctcgccggagatctcctcgagcga 4992
>gb|AF190297.1|AF190297 Arabidopsis thaliana ecotype Columbia transparent testa 1 (TT1) gene, complete cds Length = 11604 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaactctaattaattaatta 27 |||||||||||||||||||| Sbjct: 1892 aaactctaattaattaatta 1873
>gb|AC182464.2| Pan troglodytes BAC clone CH251-539C18 from chromosome 20, complete sequence Length = 162793 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tggagaactctgacacatga 50 |||||||||||||||||||| Sbjct: 38858 tggagaactctgacacatga 38877
>gb|AF326935.2|AF326935 Leishmania donovani isoleucine tRNA synthetase (IleRS) gene, complete cds Length = 3690 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgccggagagctcctcgagc 265 |||||||||||||||||||| Sbjct: 1869 cgccggagagctcctcgagc 1850
>gb|AC090493.4| Genomic sequence for Mus musculus, clone RP23-201D19,, complete sequence Length = 208651 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctaattaattaattaacatg 32 |||||||||||||||||||| Sbjct: 104540 ctaattaattaattaacatg 104559
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 2160836 gcgtcgccggcgccggcgac 2160817
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 26718590 ctcgccggagatctcctcgagcga 26718613
>gb|AY220455.1| Hordeum vulgare putative high-affinity phosphate transporter mRNA, complete cds Length = 1610 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 gagagctcctcgagcgagatgccgttggactc 282 ||||||||||||||||| |||| |||||||| Sbjct: 1547 gagagctcctcgagcgacttgcccttggactc 1516
>gb|AC018460.2|AC018460 Arabidopsis thaliana chromosome I BAC F11O6 genomic sequence, complete sequence Length = 110619 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaactctaattaattaatta 27 |||||||||||||||||||| Sbjct: 67878 aaactctaattaattaatta 67897
>gb|AF262041.1|T32B20 Arabidopsis thaliana BAC T32B20 Length = 81877 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaccaagaaaaagaaaacac 116 |||||||||||||||||||| Sbjct: 23602 aaccaagaaaaagaaaacac 23583
>gb|AC135893.2| Homo sapiens 3 BAC RP11-643E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165735 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ctctaattaattaattaaca 30 |||||||||||||||||||| Sbjct: 53691 ctctaattaattaattaaca 53672
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 9680 gcgtcgccggcgccggcgac 9661
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 65682 ctcgccggagatctcctcgagcga 65705
>emb|BX005304.8| Mouse DNA sequence from clone RP23-328P5 on chromosome 2, complete sequence Length = 200574 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aactctaattaattaattaa 28 |||||||||||||||||||| Sbjct: 22241 aactctaattaattaattaa 22260
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 75529 gcgtcgccggcgccggcgac 75510
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 131457 gcgtcgccggcgccggcgac 131438
>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1224_G08 Length = 113496 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 46851 gcgtcgccggcgccggcgac 46870
>dbj|AK062362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H06, full insert sequence Length = 534 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ctcgccggagagctcctcgagcga 267 ||||||||||| |||||||||||| Sbjct: 150 ctcgccggagatctcctcgagcga 127
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ggcgtgcgtcgccggcgccg 227 |||||||||||||||||||| Sbjct: 722649 ggcgtgcgtcgccggcgccg 722668 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 217 cgccggcgccggcgactcgtcgtcgttc 244 |||||||||||||||| ||||| ||||| Sbjct: 350721 cgccggcgccggcgacgcgtcggcgttc 350748
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgtcgccggcgccggcgac 232 |||||||||||||||||||| Sbjct: 1612988 gcgtcgccggcgccggcgac 1613007
>dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342a, complete sequence Length = 57652 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaccaagaaaaagaaaacac 116 |||||||||||||||||||| Sbjct: 14458 aaccaagaaaaagaaaacac 14439
>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 aaactctaattaattaattaacat 31 |||| ||||||||||||||||||| Sbjct: 54109 aaacactaattaattaattaacat 54132
>emb|AL589650.20| Mouse DNA sequence from clone RP23-81H23 on chromosome 15, complete sequence Length = 197660 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctaattaattaattaacatg 32 |||||||||||||||||||| Sbjct: 13460 ctaattaattaattaacatg 13479
>emb|AL606509.6| Mouse DNA sequence from clone RP23-415B9 on chromosome 11, complete sequence Length = 197852 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ataaactctaattaattaat 25 |||||||||||||||||||| Sbjct: 130693 ataaactctaattaattaat 130712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,181,424 Number of Sequences: 3902068 Number of extensions: 4181424 Number of successful extensions: 198605 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 197342 Number of HSP's gapped (non-prelim): 1261 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)