ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet68c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110901.1| Zea mays CL7341_1 mRNA sequence 66 7e-08
2ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa811... 50 0.004
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
4dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
5dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
6dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
7dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
8ref|XM_953549.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.067
9ref|XM_330796.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.067
10gb|AC159438.1| Trypanosoma brucei chromosome 8 clone RPCI93-29O4... 44 0.27
11gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 44 0.27
12gb|CP000114.1| Streptococcus agalactiae A909, complete genome 44 0.27
13gb|AF507073.2| Trypanosoma brucei vacuolar-type Ca2+-ATPase gene... 44 0.27
14gb|AF359561.1| Trypanosoma brucei vacuolar-type Ca2+-ATPase (TbA... 44 0.27
15gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence 44 0.27
16gb|AE014219.1| Streptococcus agalactiae 2603V/R section 29 of 10... 44 0.27
17emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.27
18emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 44 0.27
19emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 44 0.27
20emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complet... 44 0.27
21gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 42 1.1
22ref|XM_653802.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.1
23gb|AC016687.5| Homo sapiens BAC clone RP11-79E3 from 4, complete... 42 1.1
24gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
25gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
26gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome... 40 4.2
27ref|XM_724269.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.2
28gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
29gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno... 40 4.2
30gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno... 40 4.2
31emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 4.2
32emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
33emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
40gb|AY833361.1| Cottus poecilopus volki cytochrome b (cytb) gene,... 40 4.2
41dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
42dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
43dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
44dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
45gb|AF034101.2|AF034101 Streptomyces coelicolor ribosomal protein... 40 4.2
46emb|BX957244.15| Zebrafish DNA sequence from clone CH211-13C6 in... 40 4.2
47gb|AC110192.14| Mus musculus chromosome 7, clone RP23-227K15, co... 40 4.2
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
50emb|BX005329.9| Zebrafish DNA sequence from clone DKEY-222F2, co... 40 4.2
51emb|AL844901.8| Mouse DNA sequence from clone RP23-158F12 on chr... 40 4.2 
>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence
          Length = 746

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 276 cgaaggcggagacggggaaggtcctcccgagcccggtgggc 316
           ||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 446 cgaaggcggagacggggtaggtcctgccgagcccggtgggc 406
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>ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa8117 predicted mRNA
          Length = 504

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 263 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
           ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 428 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 376
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 263     tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
               ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 6010301 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 6010353
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>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0466B10
          Length = 151806

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 263   tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
             ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 78189 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 78241
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>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031E09
          Length = 176349

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 263   tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
             ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 34658 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 34710
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>dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F06, full
           insert sequence
          Length = 787

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 263 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
           ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 520 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 468
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>dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full
           insert sequence
          Length = 957

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 263 tcgtccttcttctcgaaggcggagacggggaaggtcctcccgagcccggtggg 315
           ||||||| |||  ||||||||  ||||||| ||||||||||||| ||||||||
Sbjct: 518 tcgtcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtggg 466
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>ref|XM_953549.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial
            mRNA
          Length = 1563

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 255  ccttggcgtcgtccttcttctcg 277
            |||||||||||||||||||||||
Sbjct: 1432 ccttggcgtcgtccttcttctcg 1410
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>ref|XM_330796.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial
            mRNA
          Length = 1563

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 255  ccttggcgtcgtccttcttctcg 277
            |||||||||||||||||||||||
Sbjct: 1432 ccttggcgtcgtccttcttctcg 1410
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>gb|AC159438.1| Trypanosoma brucei chromosome 8 clone RPCI93-29O4, complete sequence
          Length = 138187

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 151   ggactcgagaactcttcatccaatccaaac 180
             ||||| ||||||||||||||| ||||||||
Sbjct: 64167 ggactggagaactcttcatccgatccaaac 64196



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 151   ggactcgagaactcttcatccaatccaaac 180
             ||||| ||||||||||||||| ||||||||
Sbjct: 58033 ggactggagaactcttcatccgatccaaac 58062
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 151    ggactcgagaactcttcatccaatccaaac 180
              ||||| ||||||||||||||| ||||||||
Sbjct: 381620 ggactggagaactcttcatccgatccaaac 381649



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 151    ggactcgagaactcttcatccaatccaaac 180
              ||||| ||||||||||||||| ||||||||
Sbjct: 375486 ggactggagaactcttcatccgatccaaac 375515
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      gataataaaactatataaacat 27
              ||||||||||||||||||||||
Sbjct: 630581 gataataaaactatataaacat 630602
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>gb|AF507073.2| Trypanosoma brucei vacuolar-type Ca2+-ATPase gene, complete cds
          Length = 15626

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 151   ggactcgagaactcttcatccaatccaaac 180
             ||||| ||||||||||||||| ||||||||
Sbjct: 15561 ggactggagaactcttcatccgatccaaac 15532
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>gb|AF359561.1| Trypanosoma brucei vacuolar-type Ca2+-ATPase (TbA1) gene, complete
            cds
          Length = 5430

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 151  ggactcgagaactcttcatccaatccaaac 180
            ||||| ||||||||||||||| ||||||||
Sbjct: 5365 ggactggagaactcttcatccgatccaaac 5336
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>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 239    gcagctgcggccgtagccttgg 260
              ||||||||||||||||||||||
Sbjct: 102309 gcagctgcggccgtagccttgg 102330
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>gb|AE014219.1| Streptococcus agalactiae 2603V/R section 29 of 100 of the complete
            genome
          Length = 22690

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 6    gataataaaactatataaacat 27
            ||||||||||||||||||||||
Sbjct: 1747 gataataaaactatataaacat 1768
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 219    cgacggcctccttgccgccggc 240
              ||||||||||||||||||||||
Sbjct: 293549 cgacggcctccttgccgccggc 293528
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 219    cgacggcctccttgccgccggc 240
              ||||||||||||||||||||||
Sbjct: 212435 cgacggcctccttgccgccggc 212414
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 219   cgacggcctccttgccgccggc 240
             ||||||||||||||||||||||
Sbjct: 36268 cgacggcctccttgccgccggc 36289
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>emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complete genome, segment 4
          Length = 224050

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     gataataaaactatataaacat 27
             ||||||||||||||||||||||
Sbjct: 54568 gataataaaactatataaacat 54589
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>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 7       ataataaaactatataaacat 27
               |||||||||||||||||||||
Sbjct: 1692825 ataataaaactatataaacat 1692805
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>ref|XM_653802.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1290.2), mRNA
          Length = 2652

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 254 gccttggcgtcgtccttcttc 274
           |||||||||||||||||||||
Sbjct: 829 gccttggcgtcgtccttcttc 849
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>gb|AC016687.5| Homo sapiens BAC clone RP11-79E3 from 4, complete sequence
          Length = 162371

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     ataataaaactatataaacat 27
             |||||||||||||||||||||
Sbjct: 19704 ataataaaactatataaacat 19684
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>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01,
             complete sequence
          Length = 117724

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 18259 aaaactatataaaaatcatatgaa 18236
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>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
             complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 73913 aaaactatataaaaatcatatgaa 73936
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>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence
          Length = 214405

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    tggactcgagaactcttcat 169
              ||||||||||||||||||||
Sbjct: 112329 tggactcgagaactcttcat 112310
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>ref|XM_724269.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01580)
            partial mRNA
          Length = 4593

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  aaacagattatagaagatagtaat 134
            ||||||| ||||||||||||||||
Sbjct: 4243 aaacagaatatagaagatagtaat 4266
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>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 50336 aaaactatataaaaatcatatgaa 50313
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>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
             sequence
          Length = 148611

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 27929 aaaactatataaaaatcatatgaa 27906
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>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
             sequence
          Length = 132900

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 86230 aaaactatataaaaatcatatgaa 86207
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 254    gccttggcgtcgtccttcttctcg 277
              |||| |||||||||||||||||||
Sbjct: 143293 gcctcggcgtcgtccttcttctcg 143270
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>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08,
              complete sequence
          Length = 157734

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     aaaactatataaacatcatatgaa 35
              ||||||||||||| ||||||||||
Sbjct: 150805 aaaactatataaaaatcatatgaa 150782
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>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
             complete sequence
          Length = 149892

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 44392 aaaactatataaaaatcatatgaa 44369
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 29241346 aaaactatataaaaatcatatgaa 29241323
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 20743275 aaaactatataaaaatcatatgaa 20743252
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 20080261 aaaactatataaaaatcatatgaa 20080284
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 12      aaaactatataaacatcatatgaa 35
               ||||||||||||| ||||||||||
Sbjct: 8666753 aaaactatataaaaatcatatgaa 8666730
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 26472091 aaaactatataaaaatcatatgaa 26472114



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 12      aaaactatataaacatcatatgaa 35
               ||||||||||||| ||||||||||
Sbjct: 8491279 aaaactatataaaaatcatatgaa 8491256
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 14289473 aaaactatataaaaatcatatgaa 14289450



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 12      aaaactatataaacatcatatgaa 35
               ||||||||||||| ||||||||||
Sbjct: 2398313 aaaactatataaaaatcatatgaa 2398336
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>gb|AY833361.1| Cottus poecilopus volki cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 1073

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 ttggcgtcgtccttcttctc 276
           ||||||||||||||||||||
Sbjct: 277 ttggcgtcgtccttcttctc 296
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1340_C08
          Length = 192167

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 17362 aaaactatataaaaatcatatgaa 17385
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>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0057D11
          Length = 190790

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 96549 aaaactatataaaaatcatatgaa 96526
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaaactatataaacatcatatgaa 35
             ||||||||||||| ||||||||||
Sbjct: 23747 aaaactatataaaaatcatatgaa 23724
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>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0056I06
          Length = 138653

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     aaaactatataaacatcatatgaa 35
              ||||||||||||| ||||||||||
Sbjct: 122872 aaaactatataaaaatcatatgaa 122849
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>gb|AF034101.2|AF034101 Streptomyces coelicolor ribosomal protein S2 (rpsB) and elongation
           factor Ts (tsf) genes, complete cds
          Length = 2162

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 254 gccttggcgtcgtccttcttctcg 277
           |||| |||||||||||||||||||
Sbjct: 991 gcctcggcgtcgtccttcttctcg 968
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>emb|BX957244.15| Zebrafish DNA sequence from clone CH211-13C6 in linkage group 19,
              complete sequence
          Length = 162321

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     taaaactatataaacatcat 30
              ||||||||||||||||||||
Sbjct: 137781 taaaactatataaacatcat 137800
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>gb|AC110192.14| Mus musculus chromosome 7, clone RP23-227K15, complete sequence
          Length = 181287

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     taataaaactatataaacat 27
             ||||||||||||||||||||
Sbjct: 40305 taataaaactatataaacat 40324
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 20091537 aaaactatataaaaatcatatgaa 20091560
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       aaaactatataaacatcatatgaa 35
                ||||||||||||| ||||||||||
Sbjct: 21053510 aaaactatataaaaatcatatgaa 21053487
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>emb|BX005329.9| Zebrafish DNA sequence from clone DKEY-222F2, complete sequence
          Length = 186928

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aataaaactatataaacatc 28
             ||||||||||||||||||||
Sbjct: 14563 aataaaactatataaacatc 14582
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>emb|AL844901.8| Mouse DNA sequence from clone RP23-158F12 on chromosome 2, complete
             sequence
          Length = 200364

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    taaaactatataaacatcat 30
             ||||||||||||||||||||
Sbjct: 51887 taaaactatataaacatcat 51906


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,407,919
Number of Sequences: 3902068
Number of extensions: 2407919
Number of successful extensions: 47445
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47118
Number of HSP's gapped (non-prelim): 327
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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