ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet68c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 287 6e-75
2gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 64 2e-07
3emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 2.2
4gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 2.2
5emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 2.2
6emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 2.2
7gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co... 40 2.2
8gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 2.2
9gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 2.2
10gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co... 40 2.2
11gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp... 40 2.2
12gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co... 40 2.2
13gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, c... 40 2.2
14emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro... 40 2.2
15gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, com... 38 8.7
16gb|AC169627.2| Mus musculus chromosome 5, clone wi1-232C12, comp... 38 8.7
17gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
18gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 38 8.7
19gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 8.7
20gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 38 8.7
21gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, comp... 38 8.7
22gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome... 38 8.7
23emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on ch... 38 8.7
24gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hos... 38 8.7
25ref|XM_796784.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 38 8.7
26ref|XM_775014.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 38 8.7
27emb|CR628336.1| Legionella pneumophila str. Paris complete genome 38 8.7
28gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, com... 38 8.7
29emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 i... 38 8.7
30gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, comp... 38 8.7
31gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Par... 38 8.7
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
33gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, comp... 38 8.7
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
36gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, comple... 38 8.7
37dbj|AB045779.1| Lentinula edodes Le.cyp1 gene for cytochrome P45... 38 8.7
38gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 38 8.7
39gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, comp... 38 8.7
40gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 38 8.7
41gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 38 8.7
42dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
43dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
44dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
45dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
46emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, ... 38 8.7
47emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-6... 38 8.7
48dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.7
49gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, comp... 38 8.7
50gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 38 8.7
51emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chr... 38 8.7
52gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complet... 38 8.7
53emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-4... 38 8.7
54gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 38 8.7
55gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 38 8.7
56emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on ch... 38 8.7
57dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 38 8.7
58dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BA... 38 8.7 
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score =  287 bits (145), Expect = 6e-75
 Identities = 145/145 (100%)
 Strand = Plus / Minus

                                                                        
Query: 34   gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 93
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 961

                                                                        
Query: 94   cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 901

                                     
Query: 154  ttaaacgactcatgactggaagcaa 178
            |||||||||||||||||||||||||
Sbjct: 900  ttaaacgactcatgactggaagcaa 876
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>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
            complete cds
          Length = 1133

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 66/76 (86%), Gaps = 6/76 (7%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactcaactgaacttgaaattactcgggcgga-----cgaattcacaggttttacacaag 55
            ||||||||| |||||||||||||||||||||      ||||||||||| ||||||| |||
Sbjct: 1101 aactcaactcaacttgaaattactcgggcgggacgggcgaattcacag-ttttacagaag 1043

                            
Query: 56   caaattgacagggtcg 71
            ||||||||||| ||||
Sbjct: 1042 caaattgacagtgtcg 1027



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 146 aagcaaacttaaacgactcatg 167
           ||||||||||||||||||||||
Sbjct: 977 aagcaaacttaaacgactcatg 956
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    attcattcattcaaagcaaa 152
              ||||||||||||||||||||
Sbjct: 143356 attcattcattcaaagcaaa 143337
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gatggattcattcattcaaa 147
             ||||||||||||||||||||
Sbjct: 68036 gatggattcattcattcaaa 68017
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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gatggattcattcattcaaa 147
             ||||||||||||||||||||
Sbjct: 53885 gatggattcattcattcaaa 53904
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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   gggatggattcattcattca 145
             ||||||||||||||||||||
Sbjct: 10001 gggatggattcattcattca 10020
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>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
          Length = 177355

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   aatgggatggattcattcattcaa 146
             |||||||| |||||||||||||||
Sbjct: 47407 aatgggattgattcattcattcaa 47384
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>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   aatgggatggattcattcattcaa 146
             |||||||| |||||||||||||||
Sbjct: 31404 aatgggattgattcattcattcaa 31381
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>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aactgaacttgaaattactc 25
             ||||||||||||||||||||
Sbjct: 98129 aactgaacttgaaattactc 98148
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>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    aatgggatggattcattcattcaa 146
              |||||||| |||||||||||||||
Sbjct: 146597 aatgggattgattcattcattcaa 146620
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>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
          Length = 132353

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   aatgggatggattcattcattcaa 146
             |||||||| |||||||||||||||
Sbjct: 74998 aatgggattgattcattcattcaa 74975
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>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
          Length = 194754

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    aatgggatggattcattcattcaa 146
              |||||||| |||||||||||||||
Sbjct: 116188 aatgggattgattcattcattcaa 116211
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>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence
          Length = 215303

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aactcaactgaacttgaaat 20
              ||||||||||||||||||||
Sbjct: 198046 aactcaactgaacttgaaat 198065
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>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   attcattcattcaaagcaaa 152
             ||||||||||||||||||||
Sbjct: 53765 attcattcattcaaagcaaa 53784
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>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence
          Length = 235823

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 123677 ggatggattcattcattca 123659
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>gb|AC169627.2| Mus musculus chromosome 5, clone wi1-232C12, complete sequence
          Length = 44799

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     actgaacttgaaattactc 25
             |||||||||||||||||||
Sbjct: 39913 actgaacttgaaattactc 39931
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>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J17, complete sequence
          Length = 141598

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aactcaactgaacttgaaa 19
             |||||||||||||||||||
Sbjct: 26934 aactcaactgaacttgaaa 26916
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     actgaacttgaaattactc 25
             |||||||||||||||||||
Sbjct: 12554 actgaacttgaaattactc 12572
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 47      ttacacaagcaaattgaca 65
               |||||||||||||||||||
Sbjct: 5770706 ttacacaagcaaattgaca 5770724
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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
              sequence, complete sequence
          Length = 161580

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     attcacaggttttacacaa 54
              |||||||||||||||||||
Sbjct: 123756 attcacaggttttacacaa 123738
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>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence
          Length = 166928

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   attcacaggttttacacaa 54
            |||||||||||||||||||
Sbjct: 6390 attcacaggttttacacaa 6372
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>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence
          Length = 196947

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 135    tcattcattcaaagcaaacttaa 157
              |||||||||||||||| ||||||
Sbjct: 105868 tcattcattcaaagcagacttaa 105846
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>emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on chromosome 10 Contains the
             5' end of the LIPA gene for lipase A lysosomal acid
             cholesterol esterase (Wolman disease), a novel gene, the
             IFIT2 gene for interferon-induced protein with
             tetratricopeptide repeats 2, the IFIT4 gene for
             interferon-induced protein with tetratricopeptide repeats
             4, an interferon-induced protein with tetratricopeptide
             repeats 1 (IFIT1) pseudogene, the gene for a novel protein
             similar to interferon-induced protein with
             tetratricopeptide repeats 1 (IFIT1) and a CpG island,
             complete sequence
          Length = 169404

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   attcaaagcaaacttaaac 159
             |||||||||||||||||||
Sbjct: 22882 attcaaagcaaacttaaac 22864
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>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215638

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 161106 ggatggattcattcattca 161124
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>ref|XM_796784.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC577037, transcript variant 2 (LOC577037), mRNA
          Length = 4300

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 87   acagcaccacaaactgatg 105
            |||||||||||||||||||
Sbjct: 3837 acagcaccacaaactgatg 3819
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>ref|XM_775014.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC577037, transcript variant 1 (LOC577037), mRNA
          Length = 4269

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 87   acagcaccacaaactgatg 105
            |||||||||||||||||||
Sbjct: 3806 acagcaccacaaactgatg 3788
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 6       aactgaacttgaaattact 24
               |||||||||||||||||||
Sbjct: 2771253 aactgaacttgaaattact 2771235
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>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence
          Length = 161261

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    attcacaggttttacacaa 54
             |||||||||||||||||||
Sbjct: 87559 attcacaggttttacacaa 87541
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>emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 in linkage group 7
              Contains a putative novel gene, a novel retrotransposon and
              eight CpG islands, complete sequence
          Length = 146786

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 133007 ggatggattcattcattca 133025
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>gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, complete sequence
          Length = 163209

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   ttcattcattcaaagcaaa 152
             |||||||||||||||||||
Sbjct: 70533 ttcattcattcaaagcaaa 70551
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>gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 212176

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 133  attcattcattcaaagcaa 151
            |||||||||||||||||||
Sbjct: 9383 attcattcattcaaagcaa 9401
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 139      tcattcaaagcaaacttaa 157
                |||||||||||||||||||
Sbjct: 18316748 tcattcaaagcaaacttaa 18316766
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>gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, complete sequence
          Length = 107932

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   attcacaggttttacacaa 54
            |||||||||||||||||||
Sbjct: 3345 attcacaggttttacacaa 3327
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 125      tgggatggattcattcatt 143
                |||||||||||||||||||
Sbjct: 22720457 tgggatggattcattcatt 22720439



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 45       ttttacacaagcaaattga 63
                |||||||||||||||||||
Sbjct: 21774443 ttttacacaagcaaattga 21774461
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        aactcaactgaacttgaaa 19
                |||||||||||||||||||
Sbjct: 16386497 aactcaactgaacttgaaa 16386479
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>gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, complete sequence
          Length = 141040

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 127   ggatggattcattcattca 145
             |||||||||||||||||||
Sbjct: 34557 ggatggattcattcattca 34575
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>dbj|AB045779.1| Lentinula edodes Le.cyp1 gene for cytochrome P450 1, complete cds
          Length = 3987

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 122  gaatgggatggattcattcattc 144
            |||||||||| ||||||||||||
Sbjct: 3334 gaatgggatgcattcattcattc 3356
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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    attcacaggttttacacaa 54
             |||||||||||||||||||
Sbjct: 82011 attcacaggttttacacaa 82029
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>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence
          Length = 185339

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     attcacaggttttacacaa 54
              |||||||||||||||||||
Sbjct: 181995 attcacaggttttacacaa 182013
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>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    attcacaggttttacacaa 54
             |||||||||||||||||||
Sbjct: 64125 attcacaggttttacacaa 64107
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>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     attcacaggttttacacaa 54
              |||||||||||||||||||
Sbjct: 151955 attcacaggttttacacaa 151973
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 45    ttttacacaagcaaattga 63
             |||||||||||||||||||
Sbjct: 91626 ttttacacaagcaaattga 91644
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463G11
          Length = 154188

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   tcattcaaagcaaacttaa 157
             |||||||||||||||||||
Sbjct: 31484 tcattcaaagcaaacttaa 31502
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1773_H01
          Length = 146543

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 125    tgggatggattcattcatt 143
              |||||||||||||||||||
Sbjct: 138355 tgggatggattcattcatt 138337
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1092_A07
          Length = 137081

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   tgggatggattcattcatt 143
             |||||||||||||||||||
Sbjct: 39799 tgggatggattcattcatt 39781
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>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence
          Length = 166286

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   ggatggattcattcattca 145
             |||||||||||||||||||
Sbjct: 94461 ggatggattcattcattca 94443
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>emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-639F2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196853

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 128    gatggattcattcattcaa 146
              |||||||||||||||||||
Sbjct: 143969 gatggattcattcattcaa 143987
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>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      aactgaacttgaaattact 24
              |||||||||||||||||||
Sbjct: 249759 aactgaacttgaaattact 249777
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>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence
          Length = 158957

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 101741 ggatggattcattcattca 101759
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>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    attcacaggttttacacaa 54
             |||||||||||||||||||
Sbjct: 64125 attcacaggttttacacaa 64107
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>emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chromosome 2, complete
             sequence
          Length = 183980

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 124   atgggatggattcattcattcaa 146
             ||||||| |||||||||||||||
Sbjct: 89017 atgggatcgattcattcattcaa 88995
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>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence
          Length = 236514

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 218166 ggatggattcattcattca 218184
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>emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-472N19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158489

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   gatggattcattcattcaa 146
             |||||||||||||||||||
Sbjct: 88906 gatggattcattcattcaa 88888
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    attcacaggttttacacaa 54
             |||||||||||||||||||
Sbjct: 38149 attcacaggttttacacaa 38167
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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     attcacaggttttacacaa 54
              |||||||||||||||||||
Sbjct: 128089 attcacaggttttacacaa 128071
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>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
              sequence
          Length = 241418

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    ggatggattcattcattca 145
              |||||||||||||||||||
Sbjct: 149171 ggatggattcattcattca 149153
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>dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B382J1, SOD-AML
             region, complete sequence
          Length = 105567

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aactgaacttgaaattact 24
             |||||||||||||||||||
Sbjct: 41704 aactgaacttgaaattact 41722
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>dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BAC clone:B445M7
          Length = 175330

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 128   gatggattcattcattcaa 146
             |||||||||||||||||||
Sbjct: 64515 gatggattcattcattcaa 64533


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,792,830
Number of Sequences: 3902068
Number of extensions: 1792830
Number of successful extensions: 284039
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 283611
Number of HSP's gapped (non-prelim): 428
length of query: 178
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 156
effective length of database: 17,147,199,772
effective search space: 2674963164432
effective search space used: 2674963164432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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