| Clone Name | rbaet68a09 |
|---|---|
| Clone Library Name | barley_pub |
>SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially expressed| 2-like) Length = 456 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -3 Query: 223 SCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFFIFGRQNVSRLNLSPG 56 SC CL A +C CP++ + +F+FF+F VS + LSPG Sbjct: 12 SCASCLCGSAPCILCSCCPASRNSTVS-------RLIFTFFLFLGVLVSIIMLSPG 60
>PRL_PIG (P01238) Prolactin precursor (PRL)| Length = 229 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 9/36 (25%) Frame = -3 Query: 223 SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143 S + LLLV+ LF+CKS CPS NCQV +R Sbjct: 11 SLLLLLLLVSNLFLCKSVASLPICPSGAVNCQVSLR 46
>PRL_HORSE (P12420) Prolactin precursor (PRL)| Length = 229 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 10/44 (22%) Frame = -3 Query: 244 EKRSYIS-SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143 +KRS + S + LLLV++L +CKS CPS NCQV +R Sbjct: 3 KKRSSLKGSLLLLLLLVSDLLLCKSVASLPICPSGAVNCQVSLR 46
>CCR9_HUMAN (P51686) C-C chemokine receptor type 9 (C-C CKR-9) (CC-CKR-9)| (CCR-9) (GPR-9-6) (G-protein coupled receptor 28) (CDw199 antigen) Length = 357 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 211 CLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFF 101 C+LLV + SNC V + +C V+Q +FF Sbjct: 260 CILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFF 296
>OPT3_ARATH (O23482) Probable oligopeptide transporter 3 (AtOPT3)| Length = 737 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +3 Query: 27 IHLTPIYKLKPGLKFNRDTFCLPKIKKEKTCDTSKHT*SLMNTWQLD--GQLLQT 185 ++L+P++ L G F R T L + D K T S +NT +LD G+L+Q+ Sbjct: 357 LYLSPLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQS 411
>SCPB_MYCGA (Q7NB77) Segregation and condensation protein B| Length = 291 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 215 SLFIIGRRAVCLQELSIQLPSVHQALCMFRRVASFFFLY 99 +L++ GR + LQEL+ LP +HQ +F+ + + Y Sbjct: 111 ALYVAGRNGMTLQELNKILPKIHQDQ-LFKELEEMIYSY 148
>LRFN2_MACFA (Q9BE71) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAETAARSPHS 290 K + EE+ D +P G GA T+AR HS Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693
>LRFN2_HUMAN (Q9ULH4) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAETAARSPHS 290 K + EE+ D +P G GA T+AR HS Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693
>VATA_SCHPO (P31406) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 67 kDa subunit) Length = 619 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +3 Query: 129 KHT*SLMNTWQLDGQLLQTNSSATNNKQRTHEEIYDRFSPCGAGAETA 272 KH+ S+++TW + ++ N T + + D PC G TA Sbjct: 208 KHSFSMLHTWPVRAARPVADNLTANQPLLTGQRVLDALYPCVQGGTTA 255
>TILS_TROWT (Q83MT2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 415 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = -3 Query: 292 CECGDRAAVSAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119 C C R P P E RSY SC +C+ A F S VFIR + LD++ Sbjct: 198 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 254 Query: 118 Q 116 + Sbjct: 255 R 255
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = -3 Query: 292 CECGDRAAVSAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119 C C R P P E RSY SC +C+ A F S VFIR + LD++ Sbjct: 190 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 246 Query: 118 Q 116 + Sbjct: 247 R 247
>PRL_TRIVU (O62781) Prolactin precursor (PRL)| Length = 228 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 9/41 (21%) Frame = -3 Query: 247 GEKRSYISSCVRCLLLVAELFVCKS------CPS---NCQV 152 G KRS + + LLL++ LF+ KS CPS NCQV Sbjct: 2 GTKRSSLKGSLLLLLLMSSLFLFKSVESLPICPSGAVNCQV 42
>IF3X_DICDI (O15818) Putative eukaryotic translation initiation factor 3 subunit| (eIF-3) Length = 1321 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 19 LFPFI*HLSTN*SPGLNLTETHFVFQK*RKKKLATRL 129 LFP + H++ + GL+L E F RK +LAT L Sbjct: 942 LFPIVKHVNPRSTDGLDLLEAGKTFFNQRKYELATEL 978
>LRFN2_MOUSE (Q80TG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 788 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAETAARSPHS 290 K + EE+ D +P G GA T++R HS Sbjct: 667 KSQRKEELLDSRTPAGRGAGTSSRGHHS 694
>SYI_AZOSE (Q5P221) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 939 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 141 SLMNTWQLDGQLLQTNSSATNNKQRTHEEIYDRFSPCGAGAETAARS----PHSHDNLGL 308 S + +QL+G++L ++ YDR SP G AA + HS GL Sbjct: 280 SALERYQLEGRVLAAARGVALDRINFRHPFYDRLSPVFLGDYVAADAGTGIVHSAPAYGL 339 Query: 309 ED 314 +D Sbjct: 340 DD 341
>C21AA_BACTU (P56956) Pesticidal crystal protein cry21Aa (Insecticidal| delta-endotoxin CryXXIA(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1167 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 315 HPQARDCHVSVAIEPPFPRPRHMVKNGRIFLHV 217 HP + H+S + P P+ RH GR HV Sbjct: 990 HPASDYQHLSAVVVPTLPKQRHWFMEGREGEHV 1022
>SDC3_CAEEL (P34706) Zinc finger protein sdc-3| Length = 2150 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -1 Query: 321 VQHPQARDCHVSVAIEPPFPRPRHMVKNGR 232 ++H + C+ SV E P P P + V G+ Sbjct: 544 IEHQRFHRCYTSVITEEPLPNPFYWVHRGQ 573 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,345,081 Number of Sequences: 219361 Number of extensions: 974094 Number of successful extensions: 2630 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2624 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)