| Clone Name | rbaet67g10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 599 bits (302), Expect = e-168 Identities = 345/358 (96%), Gaps = 1/358 (0%) Strand = Plus / Minus Query: 17 ttgacaatcatcaaatgaaattgatatgaaaaattaatcacaacttgaaa-cagactcgg 75 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 814 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcgg 755 Query: 76 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 695 Query: 136 acgacctttgctgaaaactgcttaattagccgttgccgccgagcacggacttgagctttt 195 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 694 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 635 Query: 196 tcacctgcgcgtcgtccaaaaaggggaccttctcaaccacggcggatggcaggttgttgg 255 ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| Sbjct: 634 tcacctgcgcgtcgtccaagaaggtgaccttctcaacgacggcggatggcaggttgttgg 575 Query: 256 caaaaagcgcgtattcagtgatctggaggcctgggttggggccgttgaacgcaacgagcg 315 | || |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 574 cgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcg 515 Query: 316 ctaccgccggggagctgccaccgttgtactggtagtggagcaggccctgggggaacac 373 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 ctaccgccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacac 457
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 335 bits (169), Expect = 6e-89 Identities = 202/213 (94%) Strand = Plus / Minus Query: 161 ttagccgttgccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggg 220 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 639 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 580 Query: 221 gaccttctcaaccacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctg 280 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 579 gaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 520 Query: 281 gaggcctgggttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgtt 340 ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 519 gaggcctgggttggggccgctgaacgcaacgagcgctaccgcggaggagctgccaccgtt 460 Query: 341 gtactggtagtggagcaggccctgggggaacac 373 ||||||||||||||||||||||||||||||||| Sbjct: 459 gtactggtagtggagcaggccctgggggaacac 427
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 280 bits (141), Expect = 3e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 161 ttagccgttgccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggg 220 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 642 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 583 Query: 221 gaccttctcaaccacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctg 280 |||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 582 gaccttctcaacgacggcggacggcaggttgttggcgaagagcgcgtagtcagtgatctg 523 Query: 281 gaggcctgggttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgtt 340 ||||| |||||||||||| |||||||||||||||| ||||| | |||| ||| ||||| Sbjct: 522 caggccggggttggggccgctgaacgcaacgagcgccaccgctgccgagccgccgccgtt 463 Query: 341 gtactggtagtggagcaggccctgggggaacac 373 ||||||||||||||||||||||||||||||||| Sbjct: 462 gtactggtagtggagcaggccctgggggaacac 430
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 733 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 674 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 673 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 614 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 613 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 554 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 553 tgcaggaggccctgggggaacac 531
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 722 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 663 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 662 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 603 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 602 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 543 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 542 tgcaggaggccctgggggaacac 520
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Plus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 22551071 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 22551130 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 22551131 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 22551190 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 22551191 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 22551250 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 22551251 tgcaggaggccctgggggaacac 22551273 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 338 gttgtactggtagtggagcaggccctgggggaacac 373 |||||||||| |||||||||||||||| |||||||| Sbjct: 22546277 gttgtactggaagtggagcaggccctgcgggaacac 22546312
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Plus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 24572 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 24631 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 24632 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 24691 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 24692 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 24751 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 24752 tgcaggaggccctgggggaacac 24774 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 338 gttgtactggtagtggagcaggccctgggggaacac 373 |||||||||| |||||||||||||||| |||||||| Sbjct: 19778 gttgtactggaagtggagcaggccctgcgggaacac 19813
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Plus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 145999 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 146058 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 146059 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 146118 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 146119 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 146178 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 146179 tgcaggaggccctgggggaacac 146201 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 338 gttgtactggtagtggagcaggccctgggggaacac 373 |||||||||| |||||||||||||||| |||||||| Sbjct: 141205 gttgtactggaagtggagcaggccctgcgggaacac 141240
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 733 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 674 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 673 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 614 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 613 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 554 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 553 tgcaggaggccctgggggaacac 531
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 722 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 663 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 662 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 603 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 602 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 543 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 542 tgcaggaggccctgggggaacac 520
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 714 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 655 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 654 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 595 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 594 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 535 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 534 tgcaggaggccctgggggaacac 512
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 735 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 676 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 675 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 616 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 615 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 556 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 555 tgcaggaggccctgggggaacac 533
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 188 bits (95), Expect = 9e-45 Identities = 176/203 (86%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 632 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 573 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || |||||||||||||| ||| Sbjct: 572 acgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggaggccgggg 513 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| || |||||||| ||||||| || ||| |||||||||||||| Sbjct: 512 ttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtactggtag 453 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 452 tgcaggaggccctgggggaacac 430
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 153 bits (77), Expect = 5e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 169 tgccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttct 228 ||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 2085 tgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttct 2026 Query: 229 caaccacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctg 288 | || |||||||| || |||||||||||||| ||||| | || |||||||| ||||| | Sbjct: 2025 ccacgacggcggacgggaggttgttggcaaagagcgcaaagtcggtgatctgcaggccgg 1966 Query: 289 ggttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggt 348 ||||||||| | |||| || ||||| | || || | | | |||| |||||||||||| Sbjct: 1965 ggttggggctgctgaaggcgacgaggcccacggcagcgccggtgccggcgttgtactggt 1906 Query: 349 agtggagcaggccctgggggaacac 373 ||||||||||||||||||||||||| Sbjct: 1905 agtggagcaggccctgggggaacac 1881
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 149 bits (75), Expect = 7e-33 Identities = 171/203 (84%) Strand = Plus / Minus Query: 171 ccgccgagcacggacttgagctttttcacctgcgcgtcgtccaaaaaggggaccttctca 230 |||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 734 ccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgaccttctcg 675 Query: 231 accacggcggatggcaggttgttggcaaaaagcgcgtattcagtgatctggaggcctggg 290 || | |||||| |||||||||||||| || || ||||| || | ||||| || || ||| Sbjct: 674 acgatggcggacggcaggttgttggcgaagagggcgtagtcgttaatctgaagcccgggg 615 Query: 291 ttggggccgttgaacgcaacgagcgctaccgccggggagctgccaccgttgtactggtag 350 ||||||||| |||| | |||||||| ||||||| || ||| |||||||||||||| Sbjct: 614 ttggggccgctgaagccgacgagcgccaccgccgccgactggccggcgttgtactggtag 555 Query: 351 tggagcaggccctgggggaacac 373 || || ||||||||||||||||| Sbjct: 554 tgcaggaggccctgggggaacac 532
>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence Length = 544 Score = 99.6 bits (50), Expect = 6e-18 Identities = 134/162 (82%) Strand = Plus / Plus Query: 202 gcgcgtcgtccaaaaaggggaccttctcaaccacggcggatggcaggttgttggcaaaaa 261 ||||||||||||| |||| ||||||||| || |||||||| || |||||||||||||| | Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggcaaaga 425 Query: 262 gcgcgtattcagtgatctggaggcctgggttggggccgttgaacgcaacgagcgctaccg 321 |||| | || |||||||| ||||| |||||||||| | |||| || ||||| | || | Sbjct: 426 gcgcaaagtcggtgatctgcaggccggggttggggctgctgaaggcgacgaggcccacgg 485 Query: 322 ccggggagctgccaccgttgtactggtagtggagcaggccct 363 | | | | |||| ||||||||||||||||||||||||||| Sbjct: 486 cagcgccggtgccggcgttgtactggtagtggagcaggccct 527
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 338 gttgtactggtagtggagcaggccctgggggaacac 373 |||||||||| |||||||||||||||| |||||||| Sbjct: 483 gttgtactggaagtggagcaggccctgcgggaacac 448
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 caaatgaaattgatatgaaaaat 50 ||||||||||||||||||||||| Sbjct: 144794 caaatgaaattgatatgaaaaat 144816
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gaaattgatatgaaaaattaa 53 ||||||||||||||||||||| Sbjct: 3137 gaaattgatatgaaaaattaa 3157
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gaaattgatatgaaaaattaa 53 ||||||||||||||||||||| Sbjct: 58531 gaaattgatatgaaaaattaa 58551
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 aaattgatatgaaaaattaat 54 ||||||||||||||||||||| Sbjct: 281659 aaattgatatgaaaaattaat 281679
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gaaattgatatgaaaaattaa 53 ||||||||||||||||||||| Sbjct: 29518635 gaaattgatatgaaaaattaa 29518655
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 aaattgatatgaaaaattaat 54 ||||||||||||||||||||| Sbjct: 282959 aaattgatatgaaaaattaat 282979
>emb|BX511183.6| Zebrafish DNA sequence from clone CH211-51F18 in linkage group 22, complete sequence Length = 179106 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tgaaaaattaatcacaacttg 63 ||||||||||||||||||||| Sbjct: 76940 tgaaaaattaatcacaacttg 76960
>emb|BX004971.7| Zebrafish DNA sequence from clone DKEY-121A9 in linkage group 20, complete sequence Length = 199780 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tgaaaaattaatcacaacttg 63 ||||||||||||||||||||| Sbjct: 114601 tgaaaaattaatcacaacttg 114621
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gaaattgatatgaaaaattaa 53 ||||||||||||||||||||| Sbjct: 102905 gaaattgatatgaaaaattaa 102925
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence Length = 181468 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gaaattgatatgaaaaatta 52 |||||||||||||||||||| Sbjct: 13285 gaaattgatatgaaaaatta 13266
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gtggagcaggccctggggga 369 |||||||||||||||||||| Sbjct: 1620051 gtggagcaggccctggggga 1620032
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catcaaatgaaattgatatgaaaa 48 |||||| ||||||||||||||||| Sbjct: 57747 catcaattgaaattgatatgaaaa 57770
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 197488 tctggaggcctgggttgggg 197507
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 77548 tctggaggcctgggttgggg 77567
>gb|AC087514.2| Felis catus clone RP86-439N5, complete sequence Length = 151974 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatcatcaaatgaaattgat 41 |||||||||||||||||||| Sbjct: 60358 aatcatcaaatgaaattgat 60377
>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) (LOC632302), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 917 tctggaggcctgggttgggg 898
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaaattgatatgaaaaatta 52 |||||||||||||||||||| Sbjct: 38058 gaaattgatatgaaaaatta 38077
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aatgaaattgatatgaaaaa 49 |||||||||||||||||||| Sbjct: 195204 aatgaaattgatatgaaaaa 195185
>gb|AC137837.3| Medicago truncatula clone mth2-30e7, complete sequence Length = 79015 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaaaattaatcacaacttga 64 |||||||||||||||||||| Sbjct: 73006 aaaaattaatcacaacttga 72987
>emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chromosome 10 Contains a CpG island, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatcatcaaatgaaattgat 41 |||||||||||||||||||| Sbjct: 40708 aatcatcaaatgaaattgat 40727
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatcatcaaatgaaattgat 41 |||||||||||||||||||| Sbjct: 760 aatcatcaaatgaaattgat 779
>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence Length = 206099 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 catcaaatgaaattgatatgaaaa 48 |||||| ||||||||||||||||| Sbjct: 2381 catcaattgaaattgatatgaaaa 2358
>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence Length = 190368 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aatgaaattgatatgaaaaa 49 |||||||||||||||||||| Sbjct: 32566 aatgaaattgatatgaaaaa 32547
>gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete sequence Length = 127094 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aaaaattaatcacaacttga 64 |||||||||||||||||||| Sbjct: 46065 aaaaattaatcacaacttga 46084
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tagccgttgccgccgagcac 181 |||||||||||||||||||| Sbjct: 4650526 tagccgttgccgccgagcac 4650545
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 66569 tctggaggcctgggttgggg 66588
>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920026N02 product:cytochrome P450, family 21, subfamily a, polypeptide 1, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 822 tctggaggcctgggttgggg 803
>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase (Cyp21a1) gene, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 1511 tctggaggcctgggttgggg 1492
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tggaggcctgggttggggcc 298 |||||||||||||||||||| Sbjct: 10496 tggaggcctgggttggggcc 10515
>gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, complete sequence Length = 174688 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aatcatcaaatgaaattgat 41 |||||||||||||||||||| Sbjct: 102969 aatcatcaaatgaaattgat 102950
>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds Length = 2955 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 1335 tctggaggcctgggttgggg 1316
>emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, complete sequence Length = 32458 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aattgatatgaaaaattaat 54 |||||||||||||||||||| Sbjct: 11138 aattgatatgaaaaattaat 11157
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 197509 tctggaggcctgggttgggg 197528
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tagccgttgccgccgagcac 181 |||||||||||||||||||| Sbjct: 4654492 tagccgttgccgccgagcac 4654511
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 31075 tctggaggcctgggttgggg 31094
>emb|AL772277.13| Mouse DNA sequence from clone RP23-416H4 on chromosome 4, complete sequence Length = 167123 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gatatgaaaaattaatcaca 58 |||||||||||||||||||| Sbjct: 120801 gatatgaaaaattaatcaca 120782
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 59098 tctggaggcctgggttgggg 59117
>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 658 tctggaggcctgggttgggg 639
>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193, complete sequence Length = 102354 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaaaattaatcacaacttga 64 |||||||||||||||||||| Sbjct: 3985 aaaaattaatcacaacttga 3966
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 24358 tctggaggcctgggttgggg 24339
>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome P-450 (Cyp21(w7A)) gene, exons 1-7 Length = 12544 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 12129 tctggaggcctgggttgggg 12110
>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds Length = 3163 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 1292 tctggaggcctgggttgggg 1273
>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds Length = 3307 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctggaggcctgggttgggg 296 |||||||||||||||||||| Sbjct: 1516 tctggaggcctgggttgggg 1497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,098,489 Number of Sequences: 3902068 Number of extensions: 3098489 Number of successful extensions: 59466 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59190 Number of HSP's gapped (non-prelim): 275 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)