ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet67g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ002610.1|HVAJ2610 Hordeum vulgare mRNA for putative calmod... 767 0.0
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
3dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
4dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
5dbj|AK120457.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
6dbj|AK107464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
7dbj|AK072021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
8gb|AY273922.1| Hordeum vulgare subsp. vulgare putative cyclic nu... 82 2e-12
9gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex sub... 82 2e-12
10dbj|AK099993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
12dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
13dbj|AK112041.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
14dbj|AK100312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
15gb|AC146390.4| Pan troglodytes BAC clone RP43-145D14 from 7, com... 44 0.39
16gb|AC005027.3| Homo sapiens BAC clone GS1-512I21 from 7, complet... 44 0.39
17gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, r... 44 0.39
18gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35... 44 0.39
19gb|AC084036.12| Homo sapiens 3 BAC RP11-305K5 (Roswell Park Canc... 42 1.5
20gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosom... 40 6.1
21gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, co... 40 6.1
22gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome... 40 6.1
23gb|AC147978.3| Pan troglodytes BAC clone CH251-94E4 from 7, comp... 40 6.1
24gb|AC147977.2| Pan troglodytes BAC clone CH251-486H24 from 7, co... 40 6.1
25gb|AC145999.3| Pan troglodytes BAC clone RP43-138L12 from 7, com... 40 6.1
26gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 40 6.1
27gb|AC164635.5| Mus musculus BAC clone RP23-65G17 from chromosome... 40 6.1
28gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 40 6.1
29gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, comple... 40 6.1
30gb|AF045640.2| Caenorhabditis elegans cosmid C11D2, complete seq... 40 6.1
31emb|AL445469.4| Human DNA sequence from clone RP11-254N18 on chr... 40 6.1
32emb|AL355990.18| Human DNA sequence from clone RP5-1028L10 on ch... 40 6.1
33emb|AL109983.2|HSJ718P11 Human DNA sequence from clone RP4-718P1... 40 6.1
34emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 40 6.1
35gb|AC024067.4|AC024067 Homo sapiens BAC clone RP11-487K20 from Y... 40 6.1
36ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 6.1
37gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, com... 40 6.1
38gb|U65406.1|HSU65406 Human alternatively spliced potassium chann... 40 6.1
39dbj|AP001122.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.1
40emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on ch... 40 6.1
41dbj|AP000920.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.1 
>emb|AJ002610.1|HVAJ2610 Hordeum vulgare mRNA for putative calmodulin binding transporter
            protein
          Length = 2661

 Score =  767 bits (387), Expect = 0.0
 Identities = 387/387 (100%)
 Strand = Plus / Minus

                                                                        
Query: 65   gggcgtaaacatacttatcagctactctcatagtgggggactatgttgcattctcgggtg 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2661 gggcgtaaacatacttatcagctactctcatagtgggggactatgttgcattctcgggtg 2602

                                                                        
Query: 125  gcaacataaagaggactgggctgcgctcattatgcacaatgttatacacaagaccagatc 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 gcaacataaagaggactgggctgcgctcattatgcacaatgttatacacaagaccagatc 2542

                                                                        
Query: 185  actaatcacatcacaccattgcctagtgttactgtctagaccaggtagcaacatatcatc 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 actaatcacatcacaccattgcctagtgttactgtctagaccaggtagcaacatatcatc 2482

                                                                        
Query: 245  attgaatcgctacgctactgcgatcccctggctcgcctttgaaccgctagcgaacaccgt 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 attgaatcgctacgctactgcgatcccctggctcgcctttgaaccgctagcgaacaccgt 2422

                                                                        
Query: 305  aagcaacatcagcgatgcaaccgcacagatcgtgcagaaaataacactatcaaggcactc 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 aagcaacatcagcgatgcaaccgcacagatcgtgcagaaaataacactatcaaggcactc 2362

                                                                        
Query: 365  atgcaaactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttg 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 atgcaaactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttg 2302

                                       
Query: 425  caggcaccctttcctgcagccgggcct 451
            |||||||||||||||||||||||||||
Sbjct: 2301 caggcaccctttcctgcagccgggcct 2275
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 370      aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
                ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 19222252 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 19222193

                                      
Query: 430      accctttcctgcagccgggcct 451
                || ||||||||||||| |||||
Sbjct: 19222192 acactttcctgcagccaggcct 19222171



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 370      aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
                ||||||||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 19204827 aactactgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 19204768

                          
Query: 430      accctttcct 439
                || |||||||
Sbjct: 19204767 acactttcct 19204758
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>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001B01
          Length = 147585

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 370   aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
             ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 60016 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 59957

                                   
Query: 430   accctttcctgcagccgggcct 451
             || ||||||||||||| |||||
Sbjct: 59956 acactttcctgcagccaggcct 59935



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 370   aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
             ||||||||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 42591 aactactgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 42532

                       
Query: 430   accctttcct 439
             || |||||||
Sbjct: 42531 acactttcct 42522
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>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0043B22
          Length = 158857

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 370    aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
              ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 125737 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 125678

                                    
Query: 430    accctttcctgcagccgggcct 451
              || ||||||||||||| |||||
Sbjct: 125677 acactttcctgcagccaggcct 125656



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                          
Query: 370    aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
              ||||||||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 108312 aactactgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 108253

                        
Query: 430    accctttcct 439
              || |||||||
Sbjct: 108252 acactttcct 108243
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>dbj|AK120457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105J08, full
            insert sequence
          Length = 1640

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                        
Query: 370  aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
            ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 1296 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 1355

                                  
Query: 430  accctttcctgcagccgggcct 451
            || ||||||||||||| |||||
Sbjct: 1356 acactttcctgcagccaggcct 1377
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>dbj|AK107464.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-A09, full
            insert sequence
          Length = 1673

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                        
Query: 370  aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
            ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 1241 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 1300

                                  
Query: 430  accctttcctgcagccgggcct 451
            || ||||||||||||| |||||
Sbjct: 1301 acactttcctgcagccaggcct 1322
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>dbj|AK072021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105H04, full
            insert sequence
          Length = 1640

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                        
Query: 370  aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
            ||||| ||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 1296 aactagtgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 1355

                                  
Query: 430  accctttcctgcagccgggcct 451
            || ||||||||||||| |||||
Sbjct: 1356 acactttcctgcagccaggcct 1377
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>gb|AY273922.1| Hordeum vulgare subsp. vulgare putative cyclic nucleotide and
           calmodulin-regulated ion channel protein mRNA, partial
           cds
          Length = 891

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                       
Query: 391 aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
           |||||||||||||| |||||||| |||| |||||||||||||||||||||||  ||||||
Sbjct: 625 aagttgggttctgccggcttctgcaacaaccttgcaggcaccctttcctgcaaacgggcc 566

            
Query: 451 t 451
           |
Sbjct: 565 t 565
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>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic
            nucleotide-gated ion channel 1 (CNGC1) gene, partial cds
          Length = 5200

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 391  aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
            |||||||||||||| |||||||| |||| |||||||||||||||||||||||  ||||||
Sbjct: 2493 aagttgggttctgccggcttctgcaacaaccttgcaggcaccctttcctgcaaacgggcc 2434

             
Query: 451  t 451
            |
Sbjct: 2433 t 2433
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>dbj|AK099993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132D09, full
            insert sequence
          Length = 2702

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 370  aactactgctcctctgcggagaagttgggttctgctggcttctgtaacagccttgcaggc 429
            ||||||||||| ||||| |  ||||||||||||||||| || ||||||| ||||||||||
Sbjct: 2343 aactactgctcttctgcagcaaagttgggttctgctggtttttgtaacaaccttgcaggc 2284

                      
Query: 430  accctttcct 439
            || |||||||
Sbjct: 2283 acactttcct 2274
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                           
Query: 391     aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
               ||||| |||||||| ||||||||||| | |||||||||||| ||||||||||  ||||||
Sbjct: 8746545 aagttcggttctgcaggcttctgtaataaccttgcaggcactctttcctgcaaacgggcc 8746604

                
Query: 451     t 451
               |
Sbjct: 8746605 t 8746605
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>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0052K15
          Length = 156250

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 391   aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
             ||||| |||||||| ||||||||||| | |||||||||||| ||||||||||  ||||||
Sbjct: 45624 aagttcggttctgcaggcttctgtaataaccttgcaggcactctttcctgcaaacgggcc 45683

              
Query: 451   t 451
             |
Sbjct: 45684 t 45684
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>dbj|AK112041.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H11, full
           insert sequence
          Length = 1414

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 391 aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
           ||||| |||||||| ||||||||||| | |||||||||||| ||||||||||  ||||||
Sbjct: 987 aagttcggttctgcaggcttctgtaataaccttgcaggcactctttcctgcaaacgggcc 928

            
Query: 451 t 451
           |
Sbjct: 927 t 927
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>dbj|AK100312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078M02, full
            insert sequence
          Length = 3034

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 391  aagttgggttctgctggcttctgtaacagccttgcaggcaccctttcctgcagccgggcc 450
            ||||| |||||||| ||||||||||| | |||||||||||| ||||||||||  ||||||
Sbjct: 2646 aagttcggttctgcaggcttctgtaataaccttgcaggcactctttcctgcaaacgggcc 2587

             
Query: 451  t 451
            |
Sbjct: 2586 t 2586
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>gb|AC146390.4| Pan troglodytes BAC clone RP43-145D14 from 7, complete sequence
          Length = 116302

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 7    ataatgtaagaatccatttatt 28
            ||||||||||||||||||||||
Sbjct: 8990 ataatgtaagaatccatttatt 8969
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>gb|AC005027.3| Homo sapiens BAC clone GS1-512I21 from 7, complete sequence
          Length = 157073

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 7     ataatgtaagaatccatttatt 28
             ||||||||||||||||||||||
Sbjct: 32176 ataatgtaagaatccatttatt 32155
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>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone
              BACR16C17, complete sequence
          Length = 180425

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 182    atcactaatcacatcacaccat 203
              ||||||||||||||||||||||
Sbjct: 123604 atcactaatcacatcacaccat 123625
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>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
              sequence
          Length = 229685

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 182    atcactaatcacatcacaccat 203
              ||||||||||||||||||||||
Sbjct: 208666 atcactaatcacatcacaccat 208687
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>gb|AC084036.12| Homo sapiens 3 BAC RP11-305K5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 24031

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aaggaaataatgtaagaatcc 21
             |||||||||||||||||||||
Sbjct: 10063 aaggaaataatgtaagaatcc 10083
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>gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosome 7, complete sequence
          Length = 163916

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 409   ttctgtaacagccttgcaggcacc 432
             ||||||||||||| ||||||||||
Sbjct: 18533 ttctgtaacagccatgcaggcacc 18510
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>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence
          Length = 195273

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     gggggactatgttgcattct 118
              ||||||||||||||||||||
Sbjct: 168796 gggggactatgttgcattct 168777
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>gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome 7, complete sequence
          Length = 215384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 409   ttctgtaacagccttgcaggcacc 432
             ||||||||||||| ||||||||||
Sbjct: 22257 ttctgtaacagccatgcaggcacc 22280
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>gb|AC147978.3| Pan troglodytes BAC clone CH251-94E4 from 7, complete sequence
          Length = 206433

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aagaatccatttattctgta 33
             ||||||||||||||||||||
Sbjct: 19982 aagaatccatttattctgta 19963
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>gb|AC147977.2| Pan troglodytes BAC clone CH251-486H24 from 7, complete sequence
          Length = 213806

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aagaatccatttattctgta 33
             ||||||||||||||||||||
Sbjct: 37463 aagaatccatttattctgta 37482
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>gb|AC145999.3| Pan troglodytes BAC clone RP43-138L12 from 7, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     aagaatccatttattctgta 33
              ||||||||||||||||||||
Sbjct: 114633 aagaatccatttattctgta 114614
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>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    agatcactaatcacatcaca 199
              ||||||||||||||||||||
Sbjct: 159406 agatcactaatcacatcaca 159387
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>gb|AC164635.5| Mus musculus BAC clone RP23-65G17 from chromosome 16, complete sequence
          Length = 162255

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    caacatatcatcattgaatc 252
              ||||||||||||||||||||
Sbjct: 123207 caacatatcatcattgaatc 123188
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>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 agatcactaatcacatcaca 199
           ||||||||||||||||||||
Sbjct: 987 agatcactaatcacatcaca 968
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>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence
          Length = 182372

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tgtaagaatccatttattct 30
             ||||||||||||||||||||
Sbjct: 75170 tgtaagaatccatttattct 75189
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>gb|AF045640.2| Caenorhabditis elegans cosmid C11D2, complete sequence
          Length = 44521

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 342   aaaataacactatcaaggcactca 365
             ||||||||||| ||||||||||||
Sbjct: 26811 aaaataacactttcaaggcactca 26788
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>emb|AL445469.4| Human DNA sequence from clone RP11-254N18 on chromosome 1 Contains
            part of the ACBD6 gene for acyl-Coenzyme A binding domain
            containing 6 and a voltage-dependent anion channel 1
            (VDAC1) pseudogene, complete sequence
          Length = 129504

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  cataaagaggactgggctgc 148
            ||||||||||||||||||||
Sbjct: 6402 cataaagaggactgggctgc 6421
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>emb|AL355990.18| Human DNA sequence from clone RP5-1028L10 on chromosome 1 Contains the
             5' end of gene LOC284462, two novel genes and a CpG
             island, complete sequence
          Length = 47338

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   cagaaaataacactatcaaggcac 362
             |||||||||||||||||| |||||
Sbjct: 13032 cagaaaataacactatcatggcac 13009
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>emb|AL109983.2|HSJ718P11 Human DNA sequence from clone RP4-718P11 on chromosome 20p12.1-12.3
             Contains part of the SPTLC2L gene for serine
             palmitoyltransferase long chain base subunit 2-like
             (aminotransferase 2), complete sequence
          Length = 104913

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aatccatttattctgtactc 36
             ||||||||||||||||||||
Sbjct: 24195 aatccatttattctgtactc 24214
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>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3
          Length = 95527

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aatcacatcacaccattgcc 207
             ||||||||||||||||||||
Sbjct: 94020 aatcacatcacaccattgcc 94001
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>gb|AC024067.4|AC024067 Homo sapiens BAC clone RP11-487K20 from Y, complete sequence
          Length = 108346

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   caggtagcaacatatcatca 245
             ||||||||||||||||||||
Sbjct: 76266 caggtagcaacatatcatca 76285
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     caggtagcaacatatcatca 245
               ||||||||||||||||||||
Sbjct: 4508086 caggtagcaacatatcatca 4508105
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>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence
          Length = 204608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   caacatatcatcattgaatc 252
             ||||||||||||||||||||
Sbjct: 17283 caacatatcatcattgaatc 17264
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>gb|U65406.1|HSU65406 Human alternatively spliced potassium channels ROM-K1, ROM-K2, ROM-K3,
             ROM-K4, ROM-K5, and ROM-K6 (KCNJ1) gene, complete cds
          Length = 40046

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   ggtagcaacatatcatcattgaat 251
             |||| |||||||||||||||||||
Sbjct: 24533 ggtatcaacatatcatcattgaat 24556
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>dbj|AP001122.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-744N12, complete
              sequence
          Length = 217393

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 228    ggtagcaacatatcatcattgaat 251
              |||| |||||||||||||||||||
Sbjct: 195273 ggtatcaacatatcatcattgaat 195250
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>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete
             sequence
          Length = 208805

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   cttgcaggcaccctttcctg 440
             ||||||||||||||||||||
Sbjct: 19314 cttgcaggcaccctttcctg 19295
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>dbj|AP000920.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-740D6, complete
            sequence
          Length = 114349

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 228  ggtagcaacatatcatcattgaat 251
            |||| |||||||||||||||||||
Sbjct: 7595 ggtatcaacatatcatcattgaat 7572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,204,356
Number of Sequences: 3902068
Number of extensions: 3204356
Number of successful extensions: 55280
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55172
Number of HSP's gapped (non-prelim): 108
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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