ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet67f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186999.2| Oryza sativa (japonica cultivar-group), mRNA 190 3e-45
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
3dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
4dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
5ref|NM_189780.1| Oryza sativa (japonica cultivar-group), predic... 98 3e-17
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
7dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
8dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
9gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, comple... 96 1e-16
10gb|AY104945.1| Zea mays PCO113923 mRNA sequence 84 5e-13
11gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 68 3e-08
12ref|XM_470575.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 2e-06
14gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
16dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
17gb|BT020521.1| Arabidopsis thaliana At5g55530 gene, complete cds 60 7e-06
18ref|NM_203207.1| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
19ref|NM_124935.2| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
20ref|NM_203206.1| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
21emb|BX831223.1|CNS09ZIP Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
22emb|BX831182.1|CNS09ZEC Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
23emb|BX829589.1|CNS09YOH Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
24gb|BT004310.1| Arabidopsis thaliana clone RAFL15-32-E21 (R50090)... 60 7e-06
25dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 7e-06
26gb|BT021091.1| Arabidopsis thaliana At5g55530 gene, complete cds 60 7e-06
27emb|BX832642.1|CNS09ZM1 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
28dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.40
29gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.6
30gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
31ref|XM_824295.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.6
32emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
33gb|AE016830.1| Enterococcus faecalis V583, complete genome 42 1.6
34gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromos... 42 1.6
35ref|NM_129360.2| Arabidopsis thaliana CAC3; acetyl-CoA carboxyla... 40 6.2
36ref|NM_179960.1| Arabidopsis thaliana CAC3; acetyl-CoA carboxyla... 40 6.2
37gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
38gb|AF056970.1| Arabidopsis thaliana carboxyltransferase alpha su... 40 6.2
39gb|AF056969.1| Arabidopsis thaliana carboxyltransferase alpha su... 40 6.2
40gb|AC125173.3| Mus musculus BAC clone RP24-492I6 from chromosome... 40 6.2
41gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete s... 40 6.2
42gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.2
43gb|AC009754.10| Homo sapiens chromosome 15 clone RP11-519C12 map... 40 6.2
44gb|AC025917.8| Homo sapiens chromosome 15 clone RP11-23N2 map 15... 40 6.2
45dbj|AK221200.1| Arabidopsis thaliana mRNA for carboxyltransferas... 40 6.2
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.2
48gb|AC007661.2|AC007661 Arabidopsis thaliana chromosome II sectio... 40 6.2
49emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in ... 40 6.2
50gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 6.2
51gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
52emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
53emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5,... 40 6.2 
>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score =  190 bits (96), Expect = 3e-45
 Identities = 105/108 (97%)
 Strand = Plus / Minus

                                                                        
Query: 355  cgctcttgtcgctgccattgtccaggtccagcgggagcttcatcttggccagcgactccg 414
            |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 1338 cgctcttgtcgctgccgttgtccaggtccagcgggagcttcatcttggcgagggactccg 1279

                                                            
Query: 415  tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 462
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 1231



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                        
Query: 225  aagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccgtc 284
            ||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| ||
Sbjct: 1486 aagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggccatc 1430

                             
Query: 285  ggtttcttcgccgccgc 301
            || ||||||||||||||
Sbjct: 1429 ggcttcttcgccgccgc 1413
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  190 bits (96), Expect = 3e-45
 Identities = 105/108 (97%)
 Strand = Plus / Minus

                                                                            
Query: 355      cgctcttgtcgctgccattgtccaggtccagcgggagcttcatcttggccagcgactccg 414
                |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 23694734 cgctcttgtcgctgccgttgtccaggtccagcgggagcttcatcttggcgagggactccg 23694675

                                                                
Query: 415      tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 462
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23694674 tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 23694627



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                            
Query: 225      aagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccgtc 284
                ||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| ||
Sbjct: 23694882 aagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggccatc 23694826

                                 
Query: 285      ggtttcttcgccgccgc 301
                || ||||||||||||||
Sbjct: 23694825 ggcttcttcgccgccgc 23694809
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  190 bits (96), Expect = 3e-45
 Identities = 105/108 (97%)
 Strand = Plus / Minus

                                                                         
Query: 355   cgctcttgtcgctgccattgtccaggtccagcgggagcttcatcttggccagcgactccg 414
             |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 39348 cgctcttgtcgctgccgttgtccaggtccagcgggagcttcatcttggcgagggactccg 39289

                                                             
Query: 415   tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 462
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39288 tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 39241



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                         
Query: 225   aagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccgtc 284
             ||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| ||
Sbjct: 39496 aagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggccatc 39440

                              
Query: 285   ggtttcttcgccgccgc 301
             || ||||||||||||||
Sbjct: 39439 ggcttcttcgccgccgc 39423
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>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
            insert sequence
          Length = 1690

 Score =  190 bits (96), Expect = 3e-45
 Identities = 105/108 (97%)
 Strand = Plus / Minus

                                                                        
Query: 355  cgctcttgtcgctgccattgtccaggtccagcgggagcttcatcttggccagcgactccg 414
            |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 1339 cgctcttgtcgctgccgttgtccaggtccagcgggagcttcatcttggcgagggactccg 1280

                                                            
Query: 415  tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 462
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 tgaactgctgcatgctcttcatgtacatgtccatgatctccttctggt 1232



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 66/77 (85%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                        
Query: 225  aagaaggctcggcttccgtagaacaccttgggagatttctcctgcgcacccccggccgtc 284
            ||||| || |||||||||||||| || ||||||||||||||| ||   || |||||| ||
Sbjct: 1487 aagaaagcacggcttccgtagaatactttgggagatttctccggc---ccaccggccatc 1431

                             
Query: 285  ggtttcttcgccgccgc 301
            || ||||||||||||||
Sbjct: 1430 ggcttcttcgccgccgc 1414
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>ref|NM_189780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                        
Query: 381  tccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtac 440
            |||| ||| ||||||||||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 1073 tccatcggcagcttcatcttggacagcgattcggtgaactgctgcatgctcttcatgtac 1014

                         
Query: 441  atgtccatgatct 453
            || ||||||||||
Sbjct: 1013 atctccatgatct 1001
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                            
Query: 381      tccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtac 440
                |||| ||| ||||||||||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 41993777 tccatcggcagcttcatcttggacagcgattcggtgaactgctgcatgctcttcatgtac 41993836

                             
Query: 441      atgtccatgatct 453
                || ||||||||||
Sbjct: 41993837 atctccatgatct 41993849
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>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                         
Query: 381   tccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtac 440
             |||| ||| ||||||||||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 95854 tccatcggcagcttcatcttggacagcgattcggtgaactgctgcatgctcttcatgtac 95913

                          
Query: 441   atgtccatgatct 453
             || ||||||||||
Sbjct: 95914 atctccatgatct 95926
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>dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C08, full
            insert sequence
          Length = 1686

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                        
Query: 381  tccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtac 440
            |||| ||| ||||||||||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 1169 tccatcggcagcttcatcttggacagcgattcggtgaactgctgcatgctcttcatgtac 1110

                         
Query: 441  atgtccatgatct 453
            || ||||||||||
Sbjct: 1109 atctccatgatct 1097
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>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence
          Length = 2010

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 390 agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgtccatg 449
           |||||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 483 agcttcattttggccagggaatccgtgaattgctgcatgctcttcatgtacatgtccatg 542

               
Query: 450 atct 453
           ||||
Sbjct: 543 atct 546
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>gb|AY104945.1| Zea mays PCO113923 mRNA sequence
          Length = 1032

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 390 agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgtccatg 449
           |||||||| |||||||| || |||||||| |||||||| |||||||||||||||||||||
Sbjct: 558 agcttcattttggccagggaatccgtgaattgctgcatactcttcatgtacatgtccatg 499

             
Query: 450 at 451
           ||
Sbjct: 498 at 497



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 225 aagaaggctcggcttccgtagaacaccttgggaga 259
           ||||| || ||||| ||||||||||||||||||||
Sbjct: 726 aagaacgcccggctgccgtagaacaccttgggaga 692
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>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence
          Length = 138186

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 393   ttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacat 442
             ||||||||||||||||||||  |||||||| |||||||||||||| ||||
Sbjct: 27608 ttcatcttggccagcgactcgttgaactgccgcatgctcttcatgcacat 27559
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>ref|XM_470575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 390  agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgt 444
            ||||||||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 1088 agcttcatctttgcaagggattcagtaaactgctgcatgctcttcatgtacatgt 1034
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                      
Query: 390     agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgt 444
               ||||||||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 4863126 agcttcatctttgcaagggattcagtaaactgctgcatgctcttcatgtacatgt 4863180
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 390    agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgt 444
              ||||||||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 132421 agcttcatctttgcaagggattcagtaaactgctgcatgctcttcatgtacatgt 132367
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                      
Query: 390     agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgt 444
               ||||||||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 4862341 agcttcatctttgcaagggattcagtaaactgctgcatgctcttcatgtacatgt 4862395
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>dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C02, full
            insert sequence
          Length = 1557

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 390  agcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgtacatgt 444
            ||||||||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 1251 agcttcatctttgcaagggattcagtaaactgctgcatgctcttcatgtacatgt 1197
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>gb|BT020521.1| Arabidopsis thaliana At5g55530 gene, complete cds
          Length = 1218

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1107 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1048

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1047 catgtc 1042
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>ref|NM_203207.1| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.3 mRNA, complete cds
          Length = 1634

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1223 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1164

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1163 catgtc 1158
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>ref|NM_124935.2| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.1 mRNA, complete cds
          Length = 1740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1329 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1270

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1269 catgtc 1264
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>ref|NM_203206.1| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.2 mRNA, complete cds
          Length = 1662

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1251 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1192

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1191 catgtc 1186
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>emb|BX831223.1|CNS09ZIP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZG07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1460

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1245 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1186

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1185 catgtc 1180
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>emb|BX831182.1|CNS09ZEC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS66ZE10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1467

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1223 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1164

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1163 catgtc 1158
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>emb|BX829589.1|CNS09YOH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZA09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1525

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1251 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1192

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1191 catgtc 1186
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>gb|BT004310.1| Arabidopsis thaliana clone RAFL15-32-E21 (R50090) unknown protein
            (At5g55530) mRNA, complete cds
          Length = 1610

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1314 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1255

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1254 catgtc 1249
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>dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17
          Length = 80675

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 380   gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
             |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 71344 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 71285

                   
Query: 440   catgtc 445
             ||||||
Sbjct: 71284 catgtc 71279
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>gb|BT021091.1| Arabidopsis thaliana At5g55530 gene, complete cds
          Length = 1270

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1116 gtccagaggaagcttcatcttagccagtgaatctgtaaactgttgcatgcttttcatgta 1057

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1056 catgtc 1051
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>emb|BX832642.1|CNS09ZM1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZD08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1470

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtccagcgggagcttcatcttggccagcgactccgtgaactgctgcatgctcttcatgta 439
            |||||| || ||||||||||| |||||  | || || ||||| |||||||| ||||||||
Sbjct: 1237 gtccagaggaagcttcatcttagccagttaatctgtaaactgttgcatgcttttcatgta 1178

                  
Query: 440  catgtc 445
            ||||||
Sbjct: 1177 catgtc 1172
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 329    gggcgaggcggcggcggggccg 350
              ||||||||||||||||||||||
Sbjct: 192197 gggcgaggcggcggcggggccg 192176
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                           
Query: 332    cgaggcggcg-gcggggccgctcccgctc 359
              |||||||||| ||||||||||||||||||
Sbjct: 133206 cgaggcggcgcgcggggccgctcccgctc 133234
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                           
Query: 332    cgaggcggcg-gcggggccgctcccgctc 359
              |||||||||| ||||||||||||||||||
Sbjct: 342142 cgaggcggcgcgcggggccgctcccgctc 342170
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>ref|XM_824295.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.4890)
           partial mRNA
          Length = 909

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 350 gctcccgctcttgtcgctgcc 370
           |||||||||||||||||||||
Sbjct: 774 gctcccgctcttgtcgctgcc 754
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                           
Query: 332    cgaggcggcg-gcggggccgctcccgctc 359
              |||||||||| ||||||||||||||||||
Sbjct: 116840 cgaggcggcgcgcggggccgctcccgctc 116868
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 100    acgaagcctaaataaaacaac 120
              |||||||||||||||||||||
Sbjct: 736398 acgaagcctaaataaaacaac 736378
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>gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromosome unknown, complete
              sequence
          Length = 214968

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 329    gggcgaggcggcggcggggcc 349
              |||||||||||||||||||||
Sbjct: 186283 gggcgaggcggcggcggggcc 186303
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>ref|NM_129360.2| Arabidopsis thaliana CAC3; acetyl-CoA carboxylase AT2G38040 (CAC3)
            transcript variant AT2G38040.1 mRNA, complete cds
          Length = 2937

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  gaaggctcggcttccgtaga 246
            ||||||||||||||||||||
Sbjct: 1667 gaaggctcggcttccgtaga 1648
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>ref|NM_179960.1| Arabidopsis thaliana CAC3; acetyl-CoA carboxylase AT2G38040 (CAC3)
            transcript variant AT2G38040.2 mRNA, complete cds
          Length = 2945

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  gaaggctcggcttccgtaga 246
            ||||||||||||||||||||
Sbjct: 1667 gaaggctcggcttccgtaga 1648
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    taaataaaacaacagcatgagaaa 131
              ||||||| ||||||||||||||||
Sbjct: 108745 taaataatacaacagcatgagaaa 108768
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>gb|AF056970.1| Arabidopsis thaliana carboxyltransferase alpha subunit (CAC3) gene,
            nuclear gene encoding chloroplast protein, complete cds
          Length = 6280

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  gaaggctcggcttccgtaga 246
            ||||||||||||||||||||
Sbjct: 4577 gaaggctcggcttccgtaga 4558
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>gb|AF056969.1| Arabidopsis thaliana carboxyltransferase alpha subunit (CAC3) mRNA,
            nuclear gene encoding chloroplast protein, complete cds
          Length = 2852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  gaaggctcggcttccgtaga 246
            ||||||||||||||||||||
Sbjct: 1623 gaaggctcggcttccgtaga 1604
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>gb|AC125173.3| Mus musculus BAC clone RP24-492I6 from chromosome 19, complete sequence
          Length = 149795

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   gaagcctaaataaaacaacagcat 125
             ||||||||| ||||||||||||||
Sbjct: 26231 gaagcctaattaaaacaacagcat 26254
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>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   catgtccatgatctccttct 459
             ||||||||||||||||||||
Sbjct: 23734 catgtccatgatctccttct 23715
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 332    cgaggcggcggcggggccgctccc 355
              ||||||||||||||||| ||||||
Sbjct: 246706 cgaggcggcggcggggcggctccc 246729
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>gb|AC009754.10| Homo sapiens chromosome 15 clone RP11-519C12 map 15q21.2, complete
            sequence
          Length = 217319

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  gcgaggcggcggcggggccg 350
            ||||||||||||||||||||
Sbjct: 9142 gcgaggcggcggcggggccg 9123
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>gb|AC025917.8| Homo sapiens chromosome 15 clone RP11-23N2 map 15q21, complete sequence
          Length = 149091

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   gcgaggcggcggcggggccg 350
             ||||||||||||||||||||
Sbjct: 73702 gcgaggcggcggcggggccg 73683
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>dbj|AK221200.1| Arabidopsis thaliana mRNA for carboxyltransferase alpha subunit,
            complete cds, clone: RAFL23-06-A22
          Length = 2943

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  gaaggctcggcttccgtaga 246
            ||||||||||||||||||||
Sbjct: 1692 gaaggctcggcttccgtaga 1673
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 328      tgggcgaggcggcggcggggccgc 351
                |||||||||||||||||| |||||
Sbjct: 17505888 tgggcgaggcggcggcggcgccgc 17505865
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     tcgccgccgcgctcgagtcg 311
               ||||||||||||||||||||
Sbjct: 3393525 tcgccgccgcgctcgagtcg 3393544
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>gb|AC007661.2|AC007661 Arabidopsis thaliana chromosome II section 205 of 255 of the complete
             sequence. Sequence from clones F13M22, T8P21, F16M14
          Length = 95612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   gaaggctcggcttccgtaga 246
             ||||||||||||||||||||
Sbjct: 82953 gaaggctcggcttccgtaga 82934
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>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15,
              complete sequence
          Length = 185137

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tcagctgagactgatgactg 180
              ||||||||||||||||||||
Sbjct: 101422 tcagctgagactgatgactg 101441
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 292    tcgccgccgcgctcgagtcggtgc 315
              |||||||||||| |||||||||||
Sbjct: 164960 tcgccgccgcgcccgagtcggtgc 164983
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 328      tgggcgaggcggcggcggggccgc 351
                |||||||||||||||||| |||||
Sbjct: 17460259 tgggcgaggcggcggcggcgccgc 17460236
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>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 328   tgggcgaggcggcggcggggccgc 351
             |||||||||||||||||| |||||
Sbjct: 26518 tgggcgaggcggcggcggcgccgc 26541
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>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE
          Length = 106640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   catgtccatgatctccttct 459
             ||||||||||||||||||||
Sbjct: 43894 catgtccatgatctccttct 43913


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,963,334
Number of Sequences: 3902068
Number of extensions: 4963334
Number of successful extensions: 102545
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 101143
Number of HSP's gapped (non-prelim): 1401
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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