| Clone Name | rbaet67e10 |
|---|---|
| Clone Library Name | barley_pub |
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 32.0 bits (71), Expect = 0.70 Identities = 26/91 (28%), Positives = 40/91 (43%) Frame = +3 Query: 75 GTYVRSL*LKPLIMMTTATTPAQINQSSNLNQRHCMQLHANPLASTYPRGCGDVSRLIIS 254 GT ++L ++ T A++ A + + + +Q ++L + L S R SRL Sbjct: 1148 GTSQQALQRSRMVRRTFASSLAAVRRKAPCSQ---IKLQMDALTSMIKR-----SRLHFI 1199 Query: 255 TCMVHAPACLDRSGHRRPCAPGTGRCSPARG 347 C+V P RSG P P GR P G Sbjct: 1200 HCLVPNPVVESRSGQESPPPPQPGRDKPGAG 1230
>CPN2_HUMAN (P22792) Carboxypeptidase N subunit 2 precursor (Carboxypeptidase N| polypeptide 2) (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N regulatory subunit) (Carboxypeptidase N large subunit) Length = 545 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = -1 Query: 298 WPDRSRQAGACTMQV---LIIKRDTSPHPRG*VLANGFACNCMQCRWLRFEL 152 WPD S+ G+ + V + T +P G V+ AC+ QCRWL +L Sbjct: 458 WPDESKAGGSWDLAVQERAARSQCTYSNPEGTVV---LACDQAQCRWLNVQL 506
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 30.0 bits (66), Expect = 2.7 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 288 RSGHRRPCAPGTGRCSPARGSWTG 359 R H PC+P TG C W G Sbjct: 267 RCKHNEPCSPDTGSCESCEPGWNG 290
>PYRF_PROMP (Q7V0D8) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 239 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 123 TATTPAQINQSSNLNQRHCMQLHANPLASTYPRGCGDVSRLIISTCMVHAPA 278 T P+ I NLN++ + L + + +T C +VS+L + VHA A Sbjct: 43 TREGPSVIKILKNLNKKIFLDLKFHDIPNTMSAACYEVSKLGVDIISVHASA 94
>ACPS_BURPS (Q63S99) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 143 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 Query: 384 WRAVGRVRRPSRSPWLDCIDQYPARMDACGLTDR 283 WRA+ + RPS P++ + A +DA G+T R Sbjct: 79 WRALQTLNRPSGEPYVVASGELAAWLDARGITAR 112
>ACPS_BURMA (Q62LS6) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 143 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 Query: 384 WRAVGRVRRPSRSPWLDCIDQYPARMDACGLTDR 283 WRA+ + RPS P++ + A +DA G+T R Sbjct: 79 WRALQTLNRPSGEPYVVASGELAAWLDARGITAR 112
>UL21_PRVN3 (Q00703) Protein UL21 homolog| Length = 523 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 228 GDVSRLIISTCMVHAPACLDRSGHRRP 308 G+V R++++ +VHAPA D +G P Sbjct: 384 GEVMRMLVNAAVVHAPAIADPAGASPP 410
>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)| Length = 518 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1 Query: 340 PGAPGRAAHASDGAPHGAVALEPGAEGELPHA 435 P A G AA A++GA A P AEG +P A Sbjct: 406 PAAEGEAAPAAEGAAPPAEGAAPPAEGAVPPA 437
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 387 VWRAVGRVRRPSRSPWLDCIDQYP 316 +W A+ R RR SR P LD I + P Sbjct: 4739 LWEALARKRRMSREPTLDSISELP 4762
>FGD5_HUMAN (Q6ZNL6) FYVE, RhoGEF and PH domain-containing protein 5 (Zinc| finger FYVE domain-containing protein 23) Length = 1462 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +1 Query: 289 GQATGVHARRVLVDAVQPGAPGRAAHASDGAPHGAVALEPGAEG 420 G+A G+ D+V P APG A + +G +ALE EG Sbjct: 106 GEACGLEGTGAGEDSVAPTAPGAGALSREGEEGTDLALEDEGEG 149
>KI20A_HUMAN (O95235) Kinesin family member 20A (Rabkinesin-6) (Rab6-interacting| kinesin-like protein) (GG10_2) Length = 890 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 171 RHCMQLHANPLASTYPRGCGDVSRLIISTCMVHAP 275 R CM ++ NP ASTY I++ +VHAP Sbjct: 477 RSCMIVNVNPCASTYDETLHVAKFSAIASQLVHAP 511
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 266 ACACLSRSVRPQASMRAGYWSMQSSQGLLDGRRTRPTARHTALLHLNPEPKASCH 430 +C S S++ + + S+ S L R RPT R LL L+P+ + H Sbjct: 312 SCRVRSNSLQQTPILMGHFKSLGQSPNLRSFERPRPTRRSLRLLPLSPQKVPTVH 366 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,759,045 Number of Sequences: 219361 Number of extensions: 1143580 Number of successful extensions: 3784 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3588 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3780 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)