ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet67e10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1784 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1725 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1665 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 1664 agctgccacacgcggtcgccgcgg 1641
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 4253220 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253161 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4253160 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 4253101 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 4253100 agctgccacacgcggtcgccgcgg 4253077 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| || |||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 7656819 gcgcgccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcgg 7656878 Query: 437 t 437 | Sbjct: 7656879 t 7656879 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcg 444 |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| Sbjct: 3388428 acggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccggtcgccgcg 3388370 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 6271478 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 6271537 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 15048351 ccacacgcagctgttgcacttgaaccccgacccgaa 15048316 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 15032675 ccacacgcagctgttgcacttgaaccccgacccgaa 15032710 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 14989456 ccacacgcagctgttgcacttgaaccccgacccgaa 14989421
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 4253335 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253276 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4253275 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 4253216 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 4253215 agctgccacacgcggtcgccgcgg 4253192 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| || |||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 7654654 gcgcgccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcgg 7654713 Query: 437 t 437 | Sbjct: 7654714 t 7654714 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcg 444 |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| Sbjct: 3388539 acggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccggtcgccgcg 3388481 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 6270691 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 6270750 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 15042885 ccacacgcagctgttgcacttgaaccccgacccgaa 15042850 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 15027209 ccacacgcagctgttgcacttgaaccccgacccgaa 15027244 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 14983990 ccacacgcagctgttgcacttgaaccccgacccgaa 14983955
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1560 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 1559 agctgccacacgcggtcgccgcgg 1536
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full insert sequence Length = 662 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 429 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 370 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 310 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 309 agctgccacacgcggtcgccgcgg 286
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1670 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1611 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1551 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 1550 agctgccacacgcggtcgccgcgg 1527
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1560 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 1559 agctgccacacgcggtcgccgcgg 1536
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1674 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1615 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1555 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 1554 agctgccacacgcggtcgccgcgg 1531
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 190 bits (96), Expect = 3e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 302 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 361 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 81835 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 81776 Query: 362 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 421 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81775 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 81716 Query: 422 agctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||| Sbjct: 81715 agctgccacacgcggtcgccgcgg 81692
>gb|AY108343.1| Zea mays PCO065510 mRNA sequence Length = 1496 Score = 186 bits (94), Expect = 4e-44 Identities = 133/146 (91%) Strand = Plus / Plus Query: 300 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggc 359 ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct: 369 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctgcgcgcggggc 428 Query: 360 ggcgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacccggagccgaagg 419 |||||||||| | ||||||||||||||| ||||||||||||||||| || || ||||||| Sbjct: 429 ggcgcacgcggcggacggcgcgccacaccgcgctgttgcacttgaagcccgacccgaagg 488 Query: 420 cgagctgccacacgcggtcaccgcgg 445 |||||||||| |||||||| |||||| Sbjct: 489 cgagctgccagacgcggtcgccgcgg 514
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcacc 441 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct: 1437 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgcc 1378 Query: 442 gcg 444 ||| Sbjct: 1377 gcg 1375
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcacc 441 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct: 14046782 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgcc 14046841 Query: 442 gcg 444 ||| Sbjct: 14046842 gcg 14046844 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||||||||||||||||||| |||||||||||| ||| |||||| |||||| Sbjct: 3638999 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcgg 3639058 Query: 437 t 437 | Sbjct: 3639059 t 3639059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||| |||||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 11266867 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 11266919 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 17055863 gctgttgcacttgaagccggcgccgaaggtgagc 17055830
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcacc 441 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct: 62911 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgcc 62970 Query: 442 gcg 444 ||| Sbjct: 62971 gcg 62973
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcacc 441 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct: 709 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgcc 650 Query: 442 gcg 444 ||| Sbjct: 649 gcg 647
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcacc 441 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct: 14055024 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgcc 14055083 Query: 442 gcg 444 ||| Sbjct: 14055084 gcg 14055086 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||||||||||||||||||| |||||||||||| ||| |||||| |||||| Sbjct: 3638920 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcgg 3638979 Query: 437 t 437 | Sbjct: 3638980 t 3638980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||| |||||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 11273307 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 11273359 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 17064903 gctgttgcacttgaagccggcgccgaaggtgagc 17064870
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1455 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 1407
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||||||||||||||||||| |||||||||||| ||| |||||| |||||| Sbjct: 1481 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcgg 1422 Query: 437 t 437 | Sbjct: 1421 t 1421
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 40141 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 40189
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 138186 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 138234
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| || |||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 58471 gcgcgccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcgg 58412 Query: 437 t 437 | Sbjct: 58411 t 58411
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||||||||||||||||||| |||||||||||| ||| |||||| |||||| Sbjct: 71840 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcgg 71899 Query: 437 t 437 | Sbjct: 71900 t 71900
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 21614667 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 21614715 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccg 409 |||||||||||||||||||||||| Sbjct: 23418015 acggcgctgttgcacttgaacccg 23417992
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 28405217 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 28405265 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 381 gccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 28059210 gccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 28059258 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Plus Query: 387 cggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||| || ||||||||| ||| |||||| Sbjct: 22008145 cggcactgttgcacttgaagcctgagccgaagccgatctgcca 22008187
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 1182 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 1134
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| || |||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 1621 gcgcgccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcgg 1562 Query: 437 t 437 | Sbjct: 1561 t 1561
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| || |||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 1621 gcgcgccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcgg 1562 Query: 437 t 437 | Sbjct: 1561 t 1561
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1914 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 1866
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence Length = 625 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 404 acggcgctgttgcacttgaagccggagccgaaggcgatctgccagacgcggtc 456
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence Length = 962 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 381 gccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggt 437 ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 409 gccacacggcgctgttgcacttgaacccgctgccgaaggcgatctgccagacgcggt 353
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccac 430 |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 21924866 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 21924914 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccg 409 |||||||||||||||||||||||| Sbjct: 23727925 acggcgctgttgcacttgaacccg 23727902
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcg 444 |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| Sbjct: 1394 acggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccggtcgccgcg 1336
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcg 444 |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| Sbjct: 40786 acggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccggtcgccgcg 40844
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcg 444 |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| Sbjct: 962 acggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccggtcgccgcg 904
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 ||||||||||| |||||||||||||||||||| || || ||||||| ||| ||||||||| Sbjct: 5414 gcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcacacgcgg 5355 Query: 437 t 437 | Sbjct: 5354 t 5354
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 373 gacggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||||| Sbjct: 124976 gacggcgcgccacacggcgctgttgcacttgaacccg 125012
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 ||||||||||| |||||||||||||||||||| || || ||||||| ||| ||||||||| Sbjct: 10233 gcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcacacgcgg 10292 Query: 437 t 437 | Sbjct: 10293 t 10293
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 373 gacggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||||| Sbjct: 41534 gacggcgcgccacacggcgctgttgcacttgaacccg 41570
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 373 gacggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||||| Sbjct: 27390380 gacggcgcgccacacggcgctgttgcacttgaacccg 27390416
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 432 |||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1557 ccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacac 1507
>ref|NM_189710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 cggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||| Sbjct: 657 cggcgcgccacacggcgctgttgcacttgaacccg 691
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 432 |||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 5930670 ccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacac 5930720 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| |||||||||||| ||| | |||||||||||| Sbjct: 30520197 ccacgcggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtc 30520141 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaagg 419 |||||||||||||||||| || ||||||| Sbjct: 34873577 gctgttgcacttgaaccccgacccgaagg 34873549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 cggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||| Sbjct: 41345815 cggcgcgccacacggcgctgttgcacttgaacccg 41345849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||| ||||||||||||||| || ||||||||| || |||||| |||||| Sbjct: 19951176 gcgcgccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcgg 19951117 Query: 437 t 437 | Sbjct: 19951116 t 19951116
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 cggcgcgccacacggcgctgttgcacttgaacccg 409 ||||||||||||||||||||||||||||||||||| Sbjct: 37308 cggcgcgccacacggcgctgttgcacttgaacccg 37342
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 432 |||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 108891 ccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacac 108941
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 432 |||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 160472 ccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacac 160522
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 432 |||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1557 ccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacac 1507
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| |||||||||||| ||| | |||||||||||| Sbjct: 1365 ccacgcggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtc 1309
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.20), mRNA Length = 609 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||| |||||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 52 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 104
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||| |||||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 74855 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 74907
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||| |||||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 99588 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 99536
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 8609262 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 8609318 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 8523506 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 8523450 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 8419680 ccacgcggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtc 8419736 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| || |||||| || | |||||||||||| |||||| Sbjct: 8656214 gcgctgttgcacttgaaccccgacccgaagcagatcatccacacgcggtcgccgcgg 8656270
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 24244 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 24300 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| || |||||| || | |||||||||||| |||||| Sbjct: 71196 gcgctgttgcacttgaaccccgacccgaagcagatcatccacacgcggtcgccgcgg 71252
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 138207 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 138151 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 34381 ccacgcggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtc 34437
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 84081 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 84137 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| || |||||| || | |||||||||||| |||||| Sbjct: 131033 gcgctgttgcacttgaaccccgacccgaagcagatcatccacacgcggtcgccgcgg 131089
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| |||||||||||| ||| | |||||||||||| Sbjct: 32205 ccacgcggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtc 32149
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 |||| ||||||||||||||||||| |||||||||||| ||| | |||||||||||| Sbjct: 126245 ccacgcggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtc 126189
>dbj|AK068185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C17, full insert sequence Length = 1669 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 389 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 ||||||||||||||||| |||||||||||| ||| | |||||||||||| |||||| Sbjct: 1469 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcggtcgccgcgg 1413
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 110089 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 110148
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 84686 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 84745
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full insert sequence Length = 1892 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 1560 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 1501
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full insert sequence Length = 1892 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 1560 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 1501
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full insert sequence Length = 1966 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtcaccgcgg 445 |||||||||||||||||||| ||| ||||||| ||| |||||| |||||||| |||||| Sbjct: 1561 acggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtcgccgcgg 1502
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence Length = 932 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 386 acggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||||||||||||||||||| ||||||||||| |||| |||||| Sbjct: 264 acggcgctgttgcacttgaagccggagccgaaagcgatctgcca 307
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 381 gccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 139375 gccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 139423
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 377 gcgcgccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcgg 436 |||||||| |||| ||||||||||||||| || ||||||||| || |||||| |||||| Sbjct: 54085 gcgcgccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcgg 54026 Query: 437 t 437 | Sbjct: 54025 t 54025
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 381 gccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1700 gccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1652
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 381 gccacacggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1701 gccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1653
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccg 409 |||||||||||||||||||||||| Sbjct: 8675 acggcgctgttgcacttgaacccg 8652
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaacccg 409 |||||||||||||||||||||||| Sbjct: 33528 acggcgctgttgcacttgaacccg 33505
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Plus Query: 387 cggcgctgttgcacttgaacccggagccgaaggcgagctgcca 429 |||| |||||||||||||| || ||||||||| ||| |||||| Sbjct: 56631 cggcactgttgcacttgaagcctgagccgaagccgatctgcca 56673
>gb|AY183914.1| Marchantia polymorpha beta-ketoacyl-CoA-synthase gene, complete cds Length = 9798 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggc 420 |||||| || ||||| |||||||||||||| |||||||| Sbjct: 6590 ccacacagcactgttacacttgaacccggacccgaaggc 6552
>ref|NM_196970.1| Oryza sativa (japonica cultivar-group) putative fatty acid elongase 3-ketoacyl-CoA synthase (OSJNBa0001K12.18), mRNA Length = 1867 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 1263 gctgttgcacttgaagccggcgccgaaggtgagc 1230
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 136473 gctgttgcacttgaagccggcgccgaaggtgagc 136506
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 96355 gctgttgcacttgaagccggcgccgaaggtgagc 96322
>dbj|AK120294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051A05, full insert sequence Length = 3443 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaaggcgagc 424 ||||||||||||||| |||| |||||||| |||| Sbjct: 2816 gctgttgcacttgaagccggcgccgaaggtgagc 2783
>ref|XM_468364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaagg 419 |||||||||||||||||| || ||||||| Sbjct: 1298 gctgttgcacttgaaccccgacccgaagg 1270
>gb|AY308831.1| Marchantia polymorpha FAE1 gene, complete cds Length = 2446 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcgctgttgcacttgaacccg 409 ||||||||||||||||||||| Sbjct: 1637 gcgctgttgcacttgaacccg 1617
>gb|AF333040.1| Dunaliella salina beta-ketoacyl-CoA synthase mRNA, partial cds Length = 1863 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 379 gcgccacacggcgctgttgcacttgaacccgga 411 ||||||||| || |||||||||||||| ||||| Sbjct: 1743 gcgccacaccgcactgttgcacttgaagccgga 1711
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaagg 419 |||||||||||||||||| || ||||||| Sbjct: 95172 gctgttgcacttgaaccccgacccgaagg 95144
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaagg 419 |||||||||||||||||| || ||||||| Sbjct: 33074 gctgttgcacttgaaccccgacccgaagg 33046
>dbj|AK107210.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C01, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 gctgttgcacttgaacccggagccgaagg 419 |||||||||||||||||| || ||||||| Sbjct: 1298 gctgttgcacttgaaccccgacccgaagg 1270
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 acaactgctacaacaccagca 140 ||||||||||||||||||||| Sbjct: 187000 acaactgctacaacaccagca 186980
>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9, complete sequence Length = 201771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ttacatgcaaatccattagcc 206 ||||||||||||||||||||| Sbjct: 163393 ttacatgcaaatccattagcc 163373
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 438 ||||||||||||||| |||||||| || || || || |||| |||||| || ||||| Sbjct: 85489 ccacacggcgctgttacacttgaaacccgacccaaatgcgatctgccagacccggtc 85545
>ref|XM_470781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 1257 ccacacgcagctgttgcacttgaaccccgacccgaa 1222
>ref|XM_470771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 1326 ccacacgcagctgttgcacttgaaccccgacccgaa 1291
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ccacaggcgtccatgcgcgc 315 |||||||||||||||||||| Sbjct: 1034885 ccacaggcgtccatgcgcgc 1034866
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 53306 ccacacgcagctgttgcacttgaaccccgacccgaa 53341 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 10087 ccacacgcagctgttgcacttgaaccccgacccgaa 10052
>emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid longase (fae2 gene) Length = 2018 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaa 405 |||||||||||||||||||| Sbjct: 1580 acggcgctgttgcacttgaa 1561
>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete sequence Length = 97057 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 atgattaaaacccttaataa 114 |||||||||||||||||||| Sbjct: 26015 atgattaaaacccttaataa 25996
>ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4006-PA, isoform A (LOC582897), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tttcacacaagagcgcgcac 57 |||||||||||||||||||| Sbjct: 1020 tttcacacaagagcgcgcac 1039
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 122098 ccacacgcagctgttgcacttgaaccccgacccgaa 122063 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 106422 ccacacgcagctgttgcacttgaaccccgacccgaa 106457
>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence Length = 185321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gcagtccagccaggggctcc 350 |||||||||||||||||||| Sbjct: 29847 gcagtccagccaggggctcc 29866
>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence Length = 163781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 atgattaaaacccttaataa 114 |||||||||||||||||||| Sbjct: 125752 atgattaaaacccttaataa 125771
>dbj|AK071506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093M02, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 ccacacggcgctgttgcacttgaacccggagccgaa 417 ||||||| |||||||||||||||||| || ||||| Sbjct: 1295 ccacacgcagctgttgcacttgaaccccgacccgaa 1260
>gb|AY109713.2| Zea mays CL1191_1 mRNA sequence Length = 1949 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 acggcgctgttgcacttgaa 405 |||||||||||||||||||| Sbjct: 1548 acggcgctgttgcacttgaa 1529
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctacaacaccagcacaaatt 146 |||||||||||||||||||| Sbjct: 1715372 ctacaacaccagcacaaatt 1715353
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctacaacaccagcacaaatt 146 |||||||||||||||||||| Sbjct: 79459 ctacaacaccagcacaaatt 79478
>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete sequence Length = 179534 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aagttgacataagtttcaca 44 |||||||||||||||||||| Sbjct: 86401 aagttgacataagtttcaca 86382 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,977,319 Number of Sequences: 3902068 Number of extensions: 2977319 Number of successful extensions: 64289 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63340 Number of HSP's gapped (non-prelim): 945 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
