>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Protein Xantha-l)
          Length = 417

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 379 ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 369 ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 417

>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 39/49 (79%), Positives = 46/49 (93%)
 Frame = -3

Query: 379 ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           E++D+PLVKNLKR+PLIA L SE++A YLMPPIESGSVDFAEFEP+LVY
Sbjct: 357 ETSDIPLVKNLKRIPLIAALASELLATYLMPPIESGSVDFAEFEPQLVY 405

>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = -3

Query: 379 ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           E+ D  +VKNLKRVPLIA LVSEI+AAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 357 ETEDNSVVKNLKRVPLIAALVSEILAAYLMPPIESGSVDFAEFEPKLVY 405

>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Copper response defect 1 protein)
           (Dicarboxylate diiron protein) (AtZIP
          Length = 409

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = -3

Query: 379 ESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           E++D   +K LKR+PL+  L SEI+AAYLMPP+ESGSVDFAEFEP LVY
Sbjct: 361 ETDDASFIKTLKRIPLVTSLASEILAAYLMPPVESGSVDFAEFEPNLVY 409

>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 2, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           2) (Copper target homolog 1 protein)
          Length = 407

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -3

Query: 358 VKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           +K + + P++ ++V+E+   ++M P ESGS D    +  LVY
Sbjct: 366 IKAIMKAPILERMVAEVFQVFIMTPKESGSYDLDANKTALVY 407

>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl
           ester oxidative cyclase)
          Length = 349

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 364 PLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSV 266
           PLVK   + PL   L+  +I  YL+ PI+S +V
Sbjct: 312 PLVKTFMKAPLYMSLILNLIKIYLIKPIDSQAV 344

>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 1)
          Length = 351

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 376 SNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIES 275
           S+    VK ++++PLIA +V  ++  YL+ PI++
Sbjct: 310 SSQPKFVKLIRKLPLIAAIVWNLLMVYLIKPIDT 343

>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 227 LSKKDSSLPIFTNIMMHHAPRESLNEHRVHG*LT*STSSCAHL 99
           +S +  + P   N+ +HH P  S+  HR+ G      +S  HL
Sbjct: 214 ISAEVQAPPPVVNVRVHHPPEASVQVHRIEGPNAEGPASSQHL 256

>SYG_TREDE (Q73RR5) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA|
           ligase) (GlyRS)
          Length = 451

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 190 FVKIGRDESFFDKFSKQAWA 249
           FVK G D+ +FD + KQ WA
Sbjct: 206 FVKPGTDDEWFDYWKKQRWA 225

>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = -1

Query: 306  SLRTSCPQSSLAPLILPNLSPSLFTEFVEKGFISAYLYKHNDASCSSRVSK*AQGP 139
            SLRTS   +S+     P  SP L  E          +Y  +D SC +       GP
Sbjct: 1883 SLRTSASDTSIRTFTSPLTSPKLLPEQGANSRFHMAVYLESDTSCPTTSRSPRSGP 1938

>YJCN_BACSU (O31636) Hypothetical protein yjcN precursor|
          Length = 106

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 267 LILPNLSPSLFTEFVEKGFISAYLYK 190
           ++LP LSP +FT   EKG I   +YK
Sbjct: 20  IVLPVLSPVVFTASSEKGAIRHEIYK 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,578,980
Number of Sequences: 219361
Number of extensions: 1008772
Number of successful extensions: 2131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)