ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet67e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_550510.1| Oryza sativa (japonica cultivar-group), mRNA 143 6e-31
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
3emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) 143 6e-31
4dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
5dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
6gb|AF192975.1|AF192975 Oryza sativa unknown gene 143 6e-31
7dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
8ref|XM_476693.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-30
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
10dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
11dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
12dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
13gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, comple... 123 5e-25
14gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Canc... 42 1.5
15gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.0
16gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.0
17gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete... 40 6.0
18emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chro... 40 6.0

>ref|XM_550510.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1116

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
           ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 957 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 898

                                                                       
Query: 322 gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
            ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 897 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 838

                                                                       
Query: 382 catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
           |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 837 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 778

               
Query: 442 ggtg 445
           ||||
Sbjct: 777 ggtg 774



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 158  atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
            ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 1058 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 999

                        
Query: 218  tctggatacatg 229
            | ||||||||||
Sbjct: 998  tttggatacatg 987



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Plus

                                                                          
Query: 262    ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
              ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 876372 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 876431

                                                                          
Query: 322    gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
               ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 876432 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 876491

                                                                          
Query: 382    catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
              |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 876492 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 876551

                  
Query: 442    ggtg 445
              ||||
Sbjct: 876552 ggtg 876555



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 158    atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
              ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 876271 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 876330

                          
Query: 218    tctggatacatg 229
              | ||||||||||
Sbjct: 876331 tttggatacatg 876342



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     cttattccacttgtctcaccc 34
              |||||||||||||||||||||
Sbjct: 876066 cttattccacttgtctcaccc 876086



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>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5)
          Length = 11618

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Plus

                                                                        
Query: 262  ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
            ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 8460 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 8519

                                                                        
Query: 322  gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
             ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 8520 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 8579

                                                                        
Query: 382  catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
            |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 8580 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 8639

                
Query: 442  ggtg 445
            ||||
Sbjct: 8640 ggtg 8643



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                        
Query: 158  atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
            ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 8359 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 8418

                        
Query: 218  tctggatacatg 229
            | ||||||||||
Sbjct: 8419 tttggatacatg 8430



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 14   cttattccacttgtctcaccc 34
            |||||||||||||||||||||
Sbjct: 8154 cttattccacttgtctcaccc 8174



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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Plus

                                                                         
Query: 262   ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
             ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 57267 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 57326

                                                                         
Query: 322   gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
              ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 57327 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 57386

                                                                         
Query: 382   catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
             |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 57387 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 57446

                 
Query: 442   ggtg 445
             ||||
Sbjct: 57447 ggtg 57450



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 158   atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
             ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 57166 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 57225

                         
Query: 218   tctggatacatg 229
             | ||||||||||
Sbjct: 57226 tttggatacatg 57237



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    cttattccacttgtctcaccc 34
             |||||||||||||||||||||
Sbjct: 56961 cttattccacttgtctcaccc 56981



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>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full
            insert sequence
          Length = 3418

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 262  ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
            ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 3071 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 3012

                                                                        
Query: 322  gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
             ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 3011 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 2952

                                                                        
Query: 382  catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
            |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2951 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 2892

                
Query: 442  ggtg 445
            ||||
Sbjct: 2891 ggtg 2888



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 158  atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
            ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 3172 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 3113

                        
Query: 218  tctggatacatg 229
            | ||||||||||
Sbjct: 3112 tttggatacatg 3101



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 14   cttattccacttgtctcaccc 34
            |||||||||||||||||||||
Sbjct: 3377 cttattccacttgtctcaccc 3357



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>gb|AF192975.1|AF192975 Oryza sativa unknown gene
          Length = 673

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
           ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 239 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 180

                                                                       
Query: 322 gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
            ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 179 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 120

                                                                       
Query: 382 catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
           |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 119 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 60

               
Query: 442 ggtg 445
           ||||
Sbjct: 59  ggtg 56



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 158 atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgca 204
           ||||||| ||| || |||||||| ||||||||||||| ||| |||||
Sbjct: 340 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgca 294



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>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full
           insert sequence
          Length = 1116

 Score =  143 bits (72), Expect = 6e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 ctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccgag 321
           ||||||||| || | ||||||||| |||||||| ||||| |||||||| || || || | 
Sbjct: 693 ctttgcagccagtgccttcagacgaatgcgctccgccctcgacccgattgtctgaccaac 634

                                                                       
Query: 322 gatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctcag 381
            ||||||||||||||||||||  |||| || ||  ||||||||||||| || ||||||||
Sbjct: 633 aatggaggctgctatggtgaatgccatggcagtcttgggcatgttgacagatttcctcag 574

                                                                       
Query: 382 catcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttctt 441
           |||  | ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 573 cattccaatgaatggaacagcggcatggacagctgcaaaccactgaggggagaatttctt 514

               
Query: 442 ggtg 445
           ||||
Sbjct: 513 ggtg 510



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                       
Query: 158 atcttcagcgcaagaggatcccacgccttgccctcggcgtcgctgcagctgccgctcttg 217
           ||||||| ||| || |||||||| ||||||||||||| ||| |||||  | ||  |||||
Sbjct: 794 atcttcatcgcgagcggatcccatgccttgccctcggtgtcactgcaatttccagtcttg 735

                       
Query: 218 tctggatacatg 229
           | ||||||||||
Sbjct: 734 tttggatacatg 723



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  cttattccacttgtctcaccc 34
           |||||||||||||||||||||
Sbjct: 999 cttattccacttgtctcaccc 979



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>ref|XM_476693.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1700

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Minus

                                                                        
Query: 259  gccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgccc 318
            |||||||||||| |  | ||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 1290 gccctttgcagccaatgccttcagacgaatgcgctcggccctcgacccgattgtctggcc 1231

                                                                        
Query: 319  gaggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcct 378
             |  ||||||||||||||||||||  |||| || ||  |||||||||| || || |||||
Sbjct: 1230 aataatggaggctgctatggtgaatgccatggcagtcttgggcatgttcacagatttcct 1171

                                                                        
Query: 379  cagcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaattt 438
            ||||||  ||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1170 cagcattccgatgaatggaacagcggcatggacagctgcaaaccactgcggggagaattt 1111

                   
Query: 439  cttggtg 445
            |||||||
Sbjct: 1110 cttggtg 1104



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Plus

                                                                           
Query: 259     gccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgccc 318
               |||||||||||| |  | ||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 3215904 gccctttgcagccaatgccttcagacgaatgcgctcggccctcgacccgattgtctggcc 3215963

                                                                           
Query: 319     gaggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcct 378
                |  ||||||||||||||||||||  |||| || ||  |||||||||| || || |||||
Sbjct: 3215964 aataatggaggctgctatggtgaatgccatggcagtcttgggcatgttcacagatttcct 3216023

                                                                           
Query: 379     cagcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaattt 438
               ||||||  ||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 3216024 cagcattccgatgaatggaacagcggcatggacagctgcaaaccactgcggggagaattt 3216083

                      
Query: 439     cttggtg 445
               |||||||
Sbjct: 3216084 cttggtg 3216090



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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Plus

                                                                          
Query: 259    gccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgccc 318
              |||||||||||| |  | ||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 130894 gccctttgcagccaatgccttcagacgaatgcgctcggccctcgacccgattgtctggcc 130953

                                                                          
Query: 319    gaggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcct 378
               |  ||||||||||||||||||||  |||| || ||  |||||||||| || || |||||
Sbjct: 130954 aataatggaggctgctatggtgaatgccatggcagtcttgggcatgttcacagatttcct 131013

                                                                          
Query: 379    cagcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaattt 438
              ||||||  ||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 131014 cagcattccgatgaatggaacagcggcatggacagctgcaaaccactgcggggagaattt 131073

                     
Query: 439    cttggtg 445
              |||||||
Sbjct: 131074 cttggtg 131080



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>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full
            insert sequence
          Length = 1699

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Minus

                                                                        
Query: 259  gccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgccc 318
            |||||||||||| |  | ||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 1289 gccctttgcagccaatgccttcagacgaatgcgctcggccctcgacccgattgtctggcc 1230

                                                                        
Query: 319  gaggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcct 378
             |  ||||||||||||||||||||  |||| || ||  |||||||||| || || |||||
Sbjct: 1229 aataatggaggctgctatggtgaatgccatggcagtcttgggcatgttcacagatttcct 1170

                                                                        
Query: 379  cagcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaattt 438
            ||||||  ||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1169 cagcattccgatgaatggaacagcggcatggacagctgcaaaccactgcggggagaattt 1110

                   
Query: 439  cttggtg 445
            |||||||
Sbjct: 1109 cttggtg 1103



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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Plus

                                                                         
Query: 259   gccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgccc 318
             |||||||||||| |  | ||||||||| |||||||| ||||| |||||||| || || ||
Sbjct: 25597 gccctttgcagccaatgccttcagacgaatgcgctcggccctcgacccgattgtctggcc 25656

                                                                         
Query: 319   gaggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcct 378
              |  ||||||||||||||||||||  |||| || ||  |||||||||| || || |||||
Sbjct: 25657 aataatggaggctgctatggtgaatgccatggcagtcttgggcatgttcacagatttcct 25716

                                                                         
Query: 379   cagcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaattt 438
             ||||||  ||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 25717 cagcattccgatgaatggaacagcggcatggacagctgcaaaccactgcggggagaattt 25776

                    
Query: 439   cttggtg 445
             |||||||
Sbjct: 25777 cttggtg 25783



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>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence
          Length = 1457

 Score =  123 bits (62), Expect = 5e-25
 Identities = 155/186 (83%)
 Strand = Plus / Minus

                                                                        
Query: 260  ccctttgcagcaagagtcttcagacggatgcgctcagccctagacccgatggtttgcccg 319
            |||||||||||  || || | |||||||||||||| ||||| ||||| || || || || 
Sbjct: 1028 ccctttgcagcctgattccttagacggatgcgctcggcccttgacccaatagtctggcca 969

                                                                        
Query: 320  aggatggaggctgctatggtgaacaccatcgcggttctgggcatgttgacggacttcctc 379
            |  ||||||||||||||||||||  ||||||| || ||||||||    || |||||||||
Sbjct: 968  acaatggaggctgctatggtgaatgccatcgcagtcctgggcatcacaacagacttcctc 909

                                                                        
Query: 380  agcatcgcgatgaacggaacggcggcatggactgctgcgaaccactggggggagaatttc 439
            ||||| || ||||||||||| ||||||||||| ||||| |||||||| || ||||| |||
Sbjct: 908  agcattgcaatgaacggaacagcggcatggacagctgcaaaccactgaggagagaacttc 849

                  
Query: 440  ttggtg 445
            ||||||
Sbjct: 848  ttggtg 843



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>gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167137

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    gagccaggtatcttcagcgca 169
              |||||||||||||||||||||
Sbjct: 138713 gagccaggtatcttcagcgca 138693



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     gtcggtgcaggagcgccggc 141
               ||||||||||||||||||||
Sbjct: 2881007 gtcggtgcaggagcgccggc 2881026



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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    cagcatcgcgatgaacggaa 398
              ||||||||||||||||||||
Sbjct: 159362 cagcatcgcgatgaacggaa 159343



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>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence
          Length = 52591

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 232   ggtgactgtggcggcgggaccggcggtg 259
             |||| |||||||||||||| ||||||||
Sbjct: 30448 ggtggctgtggcggcgggagcggcggtg 30475



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>emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chromosome 14, complete
              sequence
          Length = 201727

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    cgaggatggaggctgctatg 337
              ||||||||||||||||||||
Sbjct: 162615 cgaggatggaggctgctatg 162596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,756,353
Number of Sequences: 3902068
Number of extensions: 2756353
Number of successful extensions: 45103
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44979
Number of HSP's gapped (non-prelim): 122
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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