>gb|AC090079.6| Homo sapiens chromosome 17, clone CTD-2535P7, complete sequence
          Length = 200477

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    taatatagcgcgcacacaca 136
              ||||||||||||||||||||
Sbjct: 174443 taatatagcgcgcacacaca 174424

>gb|AC148690.1| Macaca mulatta Major Histocompatibility Complex BAC MMU227F07, complete
             sequence
          Length = 202515

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttattcatgaaggccttg 32
             ||||||||||||||||||||
Sbjct: 56974 ttttattcatgaaggccttg 56955

>gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex MMU151L13, complete
              sequence
          Length = 199819

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ttttattcatgaaggccttg 32
              ||||||||||||||||||||
Sbjct: 161026 ttttattcatgaaggccttg 161007



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttattcatgaaggccttg 32
             ||||||||||||||||||||
Sbjct: 69252 ttttattcatgaaggccttg 69233

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ttttattcatgaaggccttg 32
               ||||||||||||||||||||
Sbjct: 3196493 ttttattcatgaaggccttg 3196512



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ttttattcatgaaggccttg 32
               ||||||||||||||||||||
Sbjct: 3104737 ttttattcatgaaggccttg 3104756

>dbj|D86951.1| Mesocricetus auratus mRNA for CYP3A31, complete cds
          Length = 1972

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 3    ttcaattgcattttattcatgaag 26
            |||| |||||||||||||||||||
Sbjct: 1658 ttcatttgcattttattcatgaag 1635

>gb|AC154114.1| Homo sapiens chromosome 11 clone fa0684, complete sequence
          Length = 35155

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 146   aatggaacaatttattcatctca 168
             ||||||| |||||||||||||||
Sbjct: 12815 aatggaataatttattcatctca 12837

>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence
          Length = 199356

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 26    ggccttggatcaattatttattg 48
             ||||||||||||||| |||||||
Sbjct: 24261 ggccttggatcaattctttattg 24239

>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6,
             complete sequence
          Length = 101890

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   aatatagcgcgcacacaca 136
             |||||||||||||||||||
Sbjct: 27603 aatatagcgcgcacacaca 27621

>gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, complete sequence
          Length = 176187

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      tcaattgcattttattcatgaag 26
              |||||| ||||||||||||||||
Sbjct: 170490 tcaattacattttattcatgaag 170512

>gb|AC004109.1| Homo sapiens PAC clone RP4-608H12 from 7, complete sequence
          Length = 69201

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     tcaattgcattttattcatgaag 26
             |||||| ||||||||||||||||
Sbjct: 43043 tcaattacattttattcatgaag 43065

>emb|AL358777.12| Human DNA sequence from clone RP11-421M1 on chromosome 6 Contains the
            gene for a novel glucosaminyl (N-acetyl) transferase
            family protein, the 3' end of the GCNT2 gene for
            glucosaminyl (N-acetyl) transferase 2 I-branching enzyme,
            the gene for a novel protein similar to GCNT2, a novel
            gene, the gene for PAK/PLC-interacting protein 1, the
            gene for a novel protein similar to PTD011 and four CpG
            islands, complete sequence
          Length = 155359

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 118  aatatagcgcgcacacaca 136
            |||||||||||||||||||
Sbjct: 8537 aatatagcgcgcacacaca 8519

>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192046

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     agacagagcggcatgcaga 70
              |||||||||||||||||||
Sbjct: 125008 agacagagcggcatgcaga 124990

>emb|BX511270.9| Zebrafish DNA sequence from clone DKEY-35N12 in linkage group 14,
            complete sequence
          Length = 246102

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 145  gaatggaacaatttattca 163
            |||||||||||||||||||
Sbjct: 9829 gaatggaacaatttattca 9847

>dbj|AP006345.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-186D19, complete
              sequence
          Length = 150214

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 146    aatggaacaatttattcatctca 168
              ||||||| |||||||||||||||
Sbjct: 147786 aatggaataatttattcatctca 147808

>gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromosome 7, complete
             sequence
          Length = 219031

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     tcaattgcattttattcatgaag 26
             |||||| ||||||||||||||||
Sbjct: 39686 tcaattacattttattcatgaag 39708

>dbj|AP007216.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-643C9, complete
             sequence
          Length = 100462

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 146   aatggaacaatttattcatctca 168
             ||||||| |||||||||||||||
Sbjct: 16902 aatggaataatttattcatctca 16924

>emb|X15085.1|PCPR113 Parsley PcPR1-1 gene for pathogenesis-related protein  type A 3'
           UTR
          Length = 282

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 105 tacaacacttcataatata 123
           |||||||||||||||||||
Sbjct: 189 tacaacacttcataatata 171

>gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, complete sequence
          Length = 182452

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     tcaattatttattgccgag 53
              |||||||||||||||||||
Sbjct: 112362 tcaattatttattgccgag 112380

>gb|DQ082736.1| Bos taurus 5'-AMP-activated protein kinase gamma-3 subunit (PRKAG3)
            gene, complete cds, alternatively spliced
          Length = 8048

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   gccttggatcaattattta 45
            |||||||||||||||||||
Sbjct: 4888 gccttggatcaattattta 4906

>gb|U48862.1|PCU48862 Petroselinum crispum pathogenesis-related protein (pr1-1) gene,
            complete cds
          Length = 2011

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 105  tacaacacttcataatata 123
            |||||||||||||||||||
Sbjct: 1748 tacaacacttcataatata 1730

>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete
             sequence
          Length = 111802

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    gtcacacatgaatgaacac 96
             |||||||||||||||||||
Sbjct: 44006 gtcacacatgaatgaacac 43988


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,923,120
Number of Sequences: 3902068
Number of extensions: 1923120
Number of successful extensions: 147461
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147388
Number of HSP's gapped (non-prelim): 73
length of query: 182
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 160
effective length of database: 17,147,199,772
effective search space: 2743551963520
effective search space used: 2743551963520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)