| Clone Name | rbaet66f03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme... | 150 | 1e-36 | 2 | DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme... | 102 | 3e-22 | 3 | DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme... | 100 | 3e-21 | 4 | SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog | 29 | 6.3 | 5 | BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (E... | 28 | 8.2 |
|---|
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 150 bits (380), Expect = 1e-36 Identities = 75/84 (89%), Positives = 79/84 (94%), Gaps = 2/84 (2%) Frame = -2 Query: 452 EAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKEGK 273 EAYDCNN+VEQELPCGGVLIYQSF ANEE+AVSAGSPRSVFHCF ENVESGHPLVKEGK Sbjct: 312 EAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHCF--ENVESGHPLVKEGK 369 Query: 272 LANLLAWRAEEDSLEE--GAVLCE 207 LANLLAWRAEE+SLEE GA+LCE Sbjct: 370 LANLLAWRAEEESLEEGTGALLCE 393
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 102 bits (255), Expect = 3e-22 Identities = 51/76 (67%), Positives = 60/76 (78%) Frame = -2 Query: 452 EAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKEGK 273 +AY CNN+VEQELPCGG+LIYQSF A E+V V+ GSP+SV HCFE EN+ + P VKEGK Sbjct: 319 DAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHCFEAENMVNPAP-VKEGK 377 Query: 272 LANLLAWRAEEDSLEE 225 L NLL W ED+LEE Sbjct: 378 LGNLLPW--GEDALEE 391
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 99.8 bits (247), Expect = 3e-21 Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 1/79 (1%) Frame = -2 Query: 452 EAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESG-HPLVKEG 276 E YDCNN+VEQELP GG+L+YQSF A E+ A SP+SVFHCF+GENVES P+ K+ Sbjct: 319 EVYDCNNMVEQELPGGGLLVYQSFCAAEDAV--ATSPKSVFHCFDGENVESAPPPMKKDY 376 Query: 275 KLANLLAWRAEEDSLEEGA 219 KLANLL W E D++EE A Sbjct: 377 KLANLLCWEEEADAMEEKA 395
>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog| Length = 713 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -2 Query: 356 SAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEEDSLEEGAV 216 +AGSP S G P+ + N+ +W A +DS+ EGAV Sbjct: 260 NAGSPNSS---------TPGSPVASVARQKNISSWLASQDSVPEGAV 297
>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)| (BSU1-like protein 3) Length = 715 Score = 28.5 bits (62), Expect = 8.2 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Frame = +3 Query: 204 SLAQHRALLQRILLRPPCEQVGKLAFLDQRVAALHILALEAVEDG-----PGRPGGDSNL 368 S A H A PP G+ F D+R L A +AV G P P G +L Sbjct: 301 SAASHAAAAAAATNTPPGRSPGRYGFSDERTGELPESAPDAVVLGSPVAPPATPSGKPSL 360 Query: 369 FI--RGKALVDEDAPAGELLLHDVV 437 + A+ + PAG L H V Sbjct: 361 SLIKPDSAVPNSVIPAGVRLHHRAV 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,699,558 Number of Sequences: 219361 Number of extensions: 1012728 Number of successful extensions: 2963 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2959 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)