| Clone Name | rbaet66d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TENS1_HUMAN (Q9HBL0) Tensin-1 | 32 | 0.52 | 2 | AROB_NITMU (Q2YB61) 3-dehydroquinate synthase (EC 4.2.3.4) | 31 | 0.68 | 3 | TENS1_BOVIN (Q9GLM4) Tensin-1 | 30 | 1.2 | 4 | AROB_NITWN (Q3SVM8) 3-dehydroquinate synthase (EC 4.2.3.4) | 28 | 5.7 | 5 | AROB_THICR (Q31DP9) 3-dehydroquinate synthase (EC 4.2.3.4) | 28 | 7.5 |
|---|
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 31.6 bits (70), Expect = 0.52 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 127 TRSPASGRLSAFSQSTQSESVPKEPPKGLP 38 ++SPAS L AF +T S P++PP LP Sbjct: 811 SKSPASSSLPAFLPTTHSPPGPQQPPASLP 840
>AROB_NITMU (Q2YB61) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 366 Score = 31.2 bits (69), Expect = 0.68 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 157 SILTSDISRSCHQKPSPIDRTSRY*HLKKLLSRSRRFGESLE 282 SILT I RSC K ++ R ++ LL+ FG ++E Sbjct: 217 SILTDAIKRSCQHKAEVVEEDERESGMRALLNLGHTFGHAIE 258
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -2 Query: 124 RSPASGRLSAFSQSTQSESVPKEPPKGLP 38 +SPA+ S+F +TQS P++PP LP Sbjct: 815 KSPATSSSSSFLPTTQSSVGPQQPPASLP 843
>AROB_NITWN (Q3SVM8) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 383 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Frame = +1 Query: 127 FFTGLLVTHVSILTSDISR------SCHQKPSPIDRTSRY*HLKKLLSRSRRFGESLE 282 FF L V H I+ D +R SC K + + R R + LL+ FG +LE Sbjct: 206 FFAWLEVHHADIVKGDAAREHAVATSCRAKAAIVARDERESGERALLNLGHTFGHALE 263
>AROB_THICR (Q31DP9) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 358 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/49 (28%), Positives = 23/49 (46%) Frame = +1 Query: 136 GLLVTHVSILTSDISRSCHQKPSPIDRTSRY*HLKKLLSRSRRFGESLE 282 GLL +L I RSC K + + + + L+ L + FG ++E Sbjct: 204 GLLARDPVVLAEAIERSCQNKATIVAKDEKEAGLRALFNLGHTFGHAIE 252 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,886,000 Number of Sequences: 219361 Number of extensions: 749475 Number of successful extensions: 1892 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1891 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)