ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet66c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FREM3_MOUSE (Q5H8B9) FRAS1-related extracellular matrix protein ... 28 5.2

>FREM3_MOUSE (Q5H8B9) FRAS1-related extracellular matrix protein 3 precursor (NV|
            domain-containing protein 2)
          Length = 2123

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 146  TSQILAHSTRLGSRRLRSYREPFLCAHKHDAMEKTTNSIFAW 21
            T Q+   S  + S  L+  +EP   A++HD  E T +S   W
Sbjct: 1231 TQQLATGSKPIHSFTLQEIQEPSSIAYEHDDSESTEDSFEVW 1272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,702,905
Number of Sequences: 219361
Number of extensions: 466229
Number of successful extensions: 1186
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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