>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)|
          Length = 1412

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 65  HKTVVASQHVQEPRSRPDSHTHKVNKQQSRAHQTH 169
           H  V+AS H Q+ + +  +  H+   QQ + HQ H
Sbjct: 313 HVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQH 347

>MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Modulator of|
           transcription protein 3) (Hypoxic gene repressor protein
           7)
          Length = 490

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +2

Query: 80  ASQHVQEPRSRPDSHTHKVNKQQSRAH----QTHTRIQR-ANTDDVGTASL 217
           A  H+Q+ + +   H  + ++QQ   H    Q HT +Q  +NT+++G+ SL
Sbjct: 3   ADHHLQQQQQQRQQHQQQQHQQQQHQHQHQQQQHTILQNVSNTNNIGSDSL 53

>RL4_METAC (Q8TRU6) 50S ribosomal protein L4P|
          Length = 253

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 112 ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGVPTACAVTS 237
           AR PHA+G + A    P A ++ K   + RR+ + +A A T+
Sbjct: 81  ARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATT 122

>RL4_METMA (Q8PV49) 50S ribosomal protein L4P|
          Length = 253

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 112 ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGVPTACAVT 234
           AR PHA+G + A    P A ++ K   + RR+ + +A A T
Sbjct: 81  ARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAAT 121

>CCD13_HUMAN (Q8IYE1) Coiled-coil domain-containing protein 13|
          Length = 715

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +2

Query: 20  N*TLKKIQSKLNYYYHKTVVASQHVQEPRSRPDSHTHKVNKQQSRAHQTHTRIQRANTDD 199
           N  L + + KL    H+TVV  QH+++ R  P     K +  Q  A +T T +  +N   
Sbjct: 578 NSKLLESERKLQEERHRTVVLEQHLEKIRLEPG----KASASQRAAPRTKTGLPTSNNRH 633

Query: 200 VGTAS 214
             T S
Sbjct: 634 NPTGS 638

>H15_DROME (Q94890) T-box protein H15|
          Length = 660

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 74  VVASQHVQEPRSRPDSHTHKVNKQQSRAHQTHTRIQRANTDDVGTAS 214
           V   Q  Q+ + R  +H H    +Q R H  H      N+ + G ++
Sbjct: 166 VAQQQQQQQQQQRQQTHHHATTGKQQRQHHNHHSSNTNNSSNSGNSN 212

>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)|
            (Ubiquitin-protein ligase 2)
          Length = 3658

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +1

Query: 79   SITTRTRAEI*ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGVPTACAVTSLMQS 249
            S+ T TRA   A Q  ++         PN  KNT S  R   HG  T+  V  L Q+
Sbjct: 1993 SLETLTRAANAAEQLKSE--------VPNEQKNTDSDERHDSHGTSTSTEVDELNQN 2041

>ADAM8_MOUSE (Q05910) ADAM 8 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 8) (Cell surface antigen MS2)
           (Macrophage cysteine-rich glycoprotein) (CD156 antigen)
          Length = 826

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 159 CARDCCLFTLCVWLSGLDLGSCTCC 85
           C   CC  T C  + G +  S TCC
Sbjct: 425 CQNPCCNATTCQLVKGAECASGTCC 449

>RAD17_PONPY (Q5R652) Cell cycle checkpoint protein RAD17|
          Length = 681

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 82  ITTRTRAEI*ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGV 213
           + T  +A++  RQP   G    IT  P   K T  K   + HG+
Sbjct: 113 VETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGI 156

>RAD17_HUMAN (O75943) Cell cycle checkpoint protein RAD17 (hRad17)|
           (RF-C/activator 1 homolog)
          Length = 681

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 82  ITTRTRAEI*ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGV 213
           + T  +A++  RQP   G    IT  P   K T  K   + HG+
Sbjct: 113 VETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGI 156

>VE2_HPV53 (P36797) Regulatory protein E2|
          Length = 384

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
 Frame = +2

Query: 5   IPTSYN*TLKKIQSKLNYYYHKTVVASQHV------------QEPRSRPDSHTHKVNKQQ 148
           + +++   +  +++   YY HKT   S  V            + PR+     T    +  
Sbjct: 199 VSSTFRSNVSSVETVNEYYSHKTPTTSTPVGTYEASSSLRPGKRPRTTEPDSTDSTTQST 258

Query: 149 SRAHQTHTRIQRANTDDVGTASLLHALSPHSC 244
           + A +++      NTD+    +  H     SC
Sbjct: 259 TTARESYAECVARNTDNTNNNTRKHLPGGASC 290

>RAD17_CERAE (Q9XT62) Cell cycle checkpoint protein RAD17|
          Length = 670

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 82  ITTRTRAEI*ARQPHAQGKQTAITCTPNAYKNTKSKYRRRRHGV 213
           + T  +A++  RQP   G    IT  P   K T  K   + HG+
Sbjct: 102 VETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGI 145


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,236,551
Number of Sequences: 219361
Number of extensions: 662412
Number of successful extensions: 1952
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)