| Clone Name | rbaet66c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC105150.2| Homo sapiens chromosome 8, clone RP11-328K2, complete sequence Length = 201000 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 aagatactacgttgtttcctctcca 81 |||||||||| |||||||||||||| Sbjct: 145781 aagatactaccttgtttcctctcca 145757
>emb|AL021046.4|SPAC3G9 S.pombe chromosome I cosmid c3G9 Length = 38096 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 atactacgttgtttcctctccatc 83 |||||||||||||| ||||||||| Sbjct: 13853 atactacgttgtttactctccatc 13876
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ttattgatgatagttaagat 125 |||||||||||||||||||| Sbjct: 2000584 ttattgatgatagttaagat 2000603
>ref|NM_120585.2| Arabidopsis thaliana unknown protein AT5G05030 mRNA, complete cds Length = 1213 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gaaacttattgatgatagt 119 ||||||||||||||||||| Sbjct: 1048 gaaacttattgatgatagt 1066
>ref|XM_523835.1| PREDICTED: Pan troglodytes LOC468446 (LOC468446), mRNA Length = 1416 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 1245 gatcctctccggcagcttc 1263
>ref|XM_811035.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506999.20) partial mRNA Length = 2271 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 acgttgtttcctctccatcggct 87 ||||||||||||||||| ||||| Sbjct: 1178 acgttgtttcctctccaccggct 1200
>ref|XM_812147.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510759.180) partial mRNA Length = 2274 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 acgttgtttcctctccatcggct 87 ||||||||||||||||| ||||| Sbjct: 1181 acgttgtttcctctccaccggct 1203
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 ataagatgaaccgaaactt 107 ||||||||||||||||||| Sbjct: 84555 ataagatgaaccgaaactt 84537 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 ataagatgaaccgaaactt 107 ||||||||||||||||||| Sbjct: 80978 ataagatgaaccgaaactt 80960
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tcctctccggcagcttctc 170 ||||||||||||||||||| Sbjct: 131212 tcctctccggcagcttctc 131230
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 147 ggggatcctctccggcagc 165 ||||||||||||||||||| Sbjct: 2041155 ggggatcctctccggcagc 2041137
>gb|AC040977.10| Homo sapiens chromosome 17, clone RP11-589P10, complete sequence Length = 174741 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 166694 gatcctctccggcagcttc 166676
>dbj|AK074674.1| Homo sapiens cDNA FLJ90193 fis, clone MAMMA1001237, weakly similar to MONOCARBOXYLATE TRANSPORTER 2 Length = 1803 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 1583 gatcctctccggcagcttc 1601
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 115 atagttaagataaggcgaa 133 ||||||||||||||||||| Sbjct: 826440 atagttaagataaggcgaa 826422
>ref|NM_153357.1| Homo sapiens solute carrier family 16 (monocarboxylic acid transporters), member 11 (SLC16A11), mRNA Length = 1803 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 1583 gatcctctccggcagcttc 1601
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tcctctccggcagcttctc 170 ||||||||||||||||||| Sbjct: 32361629 tcctctccggcagcttctc 32361647
>gb|BC093886.1| Homo sapiens solute carrier family 16 (monocarboxylic acid transporters), member 11, mRNA (cDNA clone MGC:120921 IMAGE:7939731), complete cds Length = 1464 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 1266 gatcctctccggcagcttc 1284
>gb|BC093860.1| Homo sapiens solute carrier family 16 (monocarboxylic acid transporters), member 11, mRNA (cDNA clone MGC:120895 IMAGE:7939705), complete cds Length = 1464 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 150 gatcctctccggcagcttc 168 ||||||||||||||||||| Sbjct: 1266 gatcctctccggcagcttc 1284
>gb|BT005588.1| Arabidopsis thaliana clone U50179 unknown protein (At5g05030) mRNA, complete cds Length = 1123 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gaaacttattgatgatagt 119 ||||||||||||||||||| Sbjct: 990 gaaacttattgatgatagt 1008
>gb|BT004324.1| Arabidopsis thaliana clone RAFL15-27-N21 (R50179) unknown protein (At5g05030) mRNA, complete cds Length = 1227 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gaaacttattgatgatagt 119 ||||||||||||||||||| Sbjct: 1048 gaaacttattgatgatagt 1066
>emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in linkage group 17, complete sequence Length = 133128 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 aacttattgatgatagtta 121 ||||||||||||||||||| Sbjct: 28376 aacttattgatgatagtta 28358
>dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13 Length = 86630 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 gaaacttattgatgatagt 119 ||||||||||||||||||| Sbjct: 51570 gaaacttattgatgatagt 51552
>emb|BX510336.6| Zebrafish DNA sequence from clone CH211-198D13 in linkage group 20, complete sequence Length = 187683 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 90 taagatgaaccgaaacttattgatgat 116 |||||||||||||| ||| |||||||| Sbjct: 173502 taagatgaaccgaatctttttgatgat 173476
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tcctctccggcagcttctc 170 ||||||||||||||||||| Sbjct: 68618 tcctctccggcagcttctc 68636
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete sequence Length = 63554 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 tcctctccggcagcttctc 170 ||||||||||||||||||| Sbjct: 23342 tcctctccggcagcttctc 23360 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 969,809 Number of Sequences: 3902068 Number of extensions: 969809 Number of successful extensions: 55404 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55307 Number of HSP's gapped (non-prelim): 97 length of query: 172 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 150 effective length of database: 17,147,199,772 effective search space: 2572079965800 effective search space used: 2572079965800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)