ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet66b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase pr... 44 1e-04
2XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hy... 30 1.2
3XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hy... 30 1.2
4XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hy... 30 1.6
5BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precu... 30 2.1
6XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hy... 29 3.5
7XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase p... 29 3.5
8XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hy... 29 3.5
9ABFA_BACST (Q9XBQ3) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (A... 28 4.6
10XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hy... 28 4.6
11SRJ38_CAEEL (O16975) Serpentine receptor class J-38 (Protein srj... 28 6.0
12XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hy... 28 7.9
13XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hy... 28 7.9
14XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase p... 28 7.9

>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8|
           precursor (EC 2.4.1.207) (End-xyloglucan transferase)
           (OsXTH8) (OsXRT5)
          Length = 290

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGECGRK 227
           YCADGWRFP+GFP EC RK
Sbjct: 272 YCADGWRFPQGFPAECYRK 290



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>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein|
           25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25)
          Length = 284

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+GFP EC
Sbjct: 267 YCTDTKRFPQGFPKEC 282



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>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein|
           15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15)
          Length = 289

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC+D  RFP+GFP EC
Sbjct: 269 YCSDLKRFPRGFPPEC 284



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>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein|
           16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16)
          Length = 291

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC+D  RFP+GFP EC
Sbjct: 271 YCSDLKRFPQGFPPEC 286



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>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor|
          Length = 283

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGECGR 230
           YC+D  RFP+G P EC R
Sbjct: 266 YCSDLKRFPQGLPAECKR 283



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>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein|
           23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23)
          Length = 286

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 268 YCTDAKRFPQGLPREC 283



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>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22|
           precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch
           protein 4)
          Length = 284

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 266 YCTDAKRFPQGLPKEC 281



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>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein|
           17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17)
          Length = 282

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 266 YCTDKRRFPRGVPAEC 281



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>ABFA_BACST (Q9XBQ3) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)|
          Length = 501

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = -2

Query: 159 GAAEQNCPSFCSFHDSIIGHVHVFLPYITLH 67
           G++ +N P+F  +  +++ H +  + YI+LH
Sbjct: 213 GSSNRNMPTFAEWEATVLDHTYDHVDYISLH 243



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>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein|
           19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19)
          Length = 277

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC+D  RFP+G P EC
Sbjct: 261 YCSDKKRFPRGVPPEC 276



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>SRJ38_CAEEL (O16975) Serpentine receptor class J-38 (Protein srj-38)|
          Length = 330

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -3

Query: 158 VLQNKIALLFVRFMIPLLDMYMSSYLTLH---YITGPIFLPCMYIFA 27
           ++ +  ALL V F+   L +Y SS   LH   Y+TG + L   Y  A
Sbjct: 98  LVASSYALLLVHFIYRFLVIYDSSLTRLHFHWYMTGSLLLSVAYFVA 144



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>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein|
           12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12)
          Length = 285

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 267 YCTDFKRFPQGLPTEC 282



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>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein|
           13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13)
          Length = 284

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 266 YCTDFKRFPQGLPTEC 281



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>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14|
           precursor (EC 2.4.1.207) (At-XTH14) (XTH-14)
          Length = 287

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 283 YCADGWRFPKGFPGEC 236
           YC D  RFP+G P EC
Sbjct: 270 YCTDFKRFPQGLPKEC 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,323,116
Number of Sequences: 219361
Number of extensions: 612799
Number of successful extensions: 1203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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