>SMC1_SCHPO (O94383) Structural maintenance of chromosome 1 (Cohesin complex|
           subunit psm1) (Chromosome segregation protein smc1)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +1

Query: 7   KVMTTALGERAHVHKMQICSNLDYRNMLEHVTHSDEGQQIHKAYLTSHKSTLHRNRNSVC 186
           +VM +A+G       M +  +L Y   L   T + EG  IHK  L +  S+ +R+     
Sbjct: 614 RVMISAVGNTLICDSMTVARDLSYNKRLNAKTVTLEGTVIHKTGLITGGSSNNRSAKHWD 673

Query: 187 ARNLRLVLR*QDR 225
             +  L+ + +DR
Sbjct: 674 DHDFDLLTQTKDR 686

>PACC_YARLI (P78978) pH-response transcription factor pacC/RIM101|
          Length = 585

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
 Frame = +1

Query: 34  RAHV----HKMQICSNLDYR--NMLEHV-THSDEGQQIHKAYLTSHKSTLHRNR 174
           R HV    +K   C+    R  ++ +HV TH+D+ +Q H AY   H    H+ +
Sbjct: 204 RVHVPLKPYKCDFCTKSFKRPQDLKKHVKTHADDNEQAHNAYAKPHMQHTHQQQ 257

>VPK2_SWPVK (P32216) Serine/threonine-protein kinase 2 (EC 2.7.11.1)|
          Length = 440

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 365 IQHCKDLQHNWH*DFHSFQHNL 430
           I++   ++HNW+ DFH F H L
Sbjct: 356 IKNSLKIEHNWYYDFHFFIHTL 377

>SEM7A_MOUSE (Q9QUR8) Semaphorin-7A precursor (Semaphorin L) (Sema L)|
           (Semaphorin K1) (Sema K1) (CD108 antigen) (CDw108)
          Length = 664

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 64  SNLDYRNMLEHVTHSDEGQQIHKAYLTSHKSTLHR 168
           S   Y+ ++ H   +  G+  H  YLT+ + T+H+
Sbjct: 402 SKYHYQKVVVHRMQASNGETFHVLYLTTDRGTIHK 436

>SIM2_MOUSE (Q61079) Single-minded homolog 2 (SIM transcription factor) (mSIM)|
          Length = 657

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +1

Query: 274 LCMS*APQELCAPPAPY*EPESVAFT*FML 363
           L ++ AP E CAPPAP  EP++ A   F+L
Sbjct: 572 LALARAPPECCAPPAP--EPQAPAQLPFVL 599


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,965,599
Number of Sequences: 219361
Number of extensions: 1159289
Number of successful extensions: 2709
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2709
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)