ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet66b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478321.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
3dbj|AK069914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
4dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in... 44 0.39
6emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, c... 44 0.39
7gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, comp... 42 1.5
8emb|CR354558.20| Zebrafish DNA sequence from clone CH211-12A23 i... 42 1.5
9emb|CR533575.5| Zebrafish DNA sequence from clone CH211-215M13 i... 42 1.5
10emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in... 42 1.5
11gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, com... 42 1.5
12emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in... 42 1.5
13emb|BX470244.6| Zebrafish DNA sequence from clone CH211-8G12 in ... 42 1.5
14gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Can... 42 1.5
15emb|AL805951.6| Mouse DNA sequence from clone RP23-326P3 on chro... 42 1.5
16gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome... 40 6.1
17gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, comp... 40 6.1
18gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
19gb|AC145996.3| Pan troglodytes BAC clone RP43-17D11 from 7, comp... 40 6.1
20gb|AC131757.3| Mus musculus BAC clone RP24-210I7 from chromosome... 40 6.1
21emb|CR293499.22| Zebrafish DNA sequence from clone CH211-106H12 ... 40 6.1
22emb|CR847786.13| Zebrafish DNA sequence from clone DKEYP-9B4 in ... 40 6.1
23emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chr... 40 6.1
24gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, com... 40 6.1
25emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encepha... 40 6.1
26emb|AJ489252.1|ECH489252 Erwinia chrysanthemi phoP gene and phoQ... 40 6.1
27gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome... 40 6.1
28emb|AJ811729.1| Corallococcus coralloides partial gyrB gene for ... 40 6.1
29gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cance... 40 6.1
30emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in ... 40 6.1
31dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, comple... 40 6.1
33gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome... 40 6.1
34gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3,... 40 6.1
35emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 i... 40 6.1
36emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in ... 40 6.1
37dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.1
38emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in ... 40 6.1
39emb|BX957315.10| Zebrafish DNA sequence from clone CH211-254E15 ... 40 6.1
40gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 6.1
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
42emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in... 40 6.1
43gb|AF001958.1|AF001958 Ambystoma tigrinum electrogenic Na+ bicar... 40 6.1 
>ref|XM_478321.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 255  tcatctccgtcctggagctctttgcatgtcataggcgccccagg 298
            |||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 1140 tcatctccgtccagtagctctctgcatgtcataggcaccccagg 1097



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  ttgattcatgctgtatccaacattgtaaggatttgcagcataattggcattaggatttcc 410
            |||||| ||| |||||||| |||| ||||||||||| |||||   ||| |||||||| ||
Sbjct: 1032 ttgatttatgttgtatccagcattataaggatttgcggcatatgcggccttaggattccc 973

                                                    
Query: 411  atagcttccagcataaccttgattgcctgcagatacagca 450
            ||||| |||  | ||  ||||||||||| |||| ||||||
Sbjct: 972  atagcctccgacgtacacttgattgcctccagacacagca 933
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 255      tcatctccgtcctggagctctttgcatgtcataggcgccccagg 298
                |||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 19255679 tcatctccgtccagtagctctctgcatgtcataggcaccccagg 19255636



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 348      tacttgattcatgctgtatccaacattgtaaggatttgcagcataattggcattaggatt 407
                ||||||||| ||| |||||||| |||| ||||||||||| |||||   ||| ||||||||
Sbjct: 19255499 tacttgatttatgttgtatccagcattataaggatttgcggcatatgcggccttaggatt 19255440

                        
Query: 408      tccatagc 415
                 |||||||
Sbjct: 19255439 cccatagc 19255432
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>dbj|AK069914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039M07, full
            insert sequence
          Length = 1350

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 255  tcatctccgtcctggagctctttgcatgtcataggcgccccagg 298
            |||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 1140 tcatctccgtccagtagctctctgcatgtcataggcaccccagg 1097



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  ttgattcatgctgtatccaacattgtaaggatttgcagcataattggcattaggatttcc 410
            |||||| ||| |||||||| |||| ||||||||||| |||||   ||| |||||||| ||
Sbjct: 1032 ttgatttatgttgtatccagcattataaggatttgcggcatatgcggccttaggattccc 973

                                                    
Query: 411  atagcttccagcataaccttgattgcctgcagatacagca 450
            ||||| |||  | ||  ||||||||||| |||| ||||||
Sbjct: 972  atagcctccgacgtacacttgattgcctccagacacagca 933
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>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1163_G04
          Length = 106253

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 255   tcatctccgtcctggagctctttgcatgtcataggcgccccagg 298
             |||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 31905 tcatctccgtccagtagctctctgcatgtcataggcaccccagg 31862



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 348   tacttgattcatgctgtatccaacattgtaaggatttgcagcataattggcattaggatt 407
             ||||||||| ||| |||||||| |||| ||||||||||| |||||   ||| ||||||||
Sbjct: 31725 tacttgatttatgttgtatccagcattataaggatttgcggcatatgcggccttaggatt 31666

                     
Query: 408   tccatagc 415
              |||||||
Sbjct: 31665 cccatagc 31658
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>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 370    acattgtaaggatttgcagcat 391
              ||||||||||||||||||||||
Sbjct: 107199 acattgtaaggatttgcagcat 107178
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>emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, complete sequence
          Length = 142570

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 370   acattgtaaggatttgcagcat 391
             ||||||||||||||||||||||
Sbjct: 62110 acattgtaaggatttgcagcat 62089
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>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence
          Length = 244671

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   aggtcaacaaatacacaaggc 134
             |||||||||||||||||||||
Sbjct: 24832 aggtcaacaaatacacaaggc 24852
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>emb|CR354558.20| Zebrafish DNA sequence from clone CH211-12A23 in linkage group 8,
             complete sequence
          Length = 177206

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 371   cattgtaaggatttgcagcat 391
             |||||||||||||||||||||
Sbjct: 20029 cattgtaaggatttgcagcat 20049
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>emb|CR533575.5| Zebrafish DNA sequence from clone CH211-215M13 in linkage group 16,
             complete sequence
          Length = 115032

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 371   cattgtaaggatttgcagcat 391
             |||||||||||||||||||||
Sbjct: 24182 cattgtaaggatttgcagcat 24202
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>emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in linkage group 14,
              complete sequence
          Length = 171899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 371    cattgtaaggatttgcagcat 391
              |||||||||||||||||||||
Sbjct: 167579 cattgtaaggatttgcagcat 167559
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>gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, complete sequence
          Length = 181555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   aggtcaacaaatacacaaggc 134
             |||||||||||||||||||||
Sbjct: 78686 aggtcaacaaatacacaaggc 78666
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>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete
              sequence
          Length = 216540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    acattgtaaggatttgcagca 390
              |||||||||||||||||||||
Sbjct: 148565 acattgtaaggatttgcagca 148585
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>emb|BX470244.6| Zebrafish DNA sequence from clone CH211-8G12 in linkage group 21,
            complete sequence
          Length = 200867

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 371  cattgtaaggatttgcagcat 391
            |||||||||||||||||||||
Sbjct: 8155 cattgtaaggatttgcagcat 8175
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>gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 130479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 160   ttgcacagaaatagaaattcagttt 184
             |||||||||||||||| ||||||||
Sbjct: 82364 ttgcacagaaatagaagttcagttt 82388
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>emb|AL805951.6| Mouse DNA sequence from clone RP23-326P3 on chromosome 4, complete
              sequence
          Length = 197080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    gatttaagaagaaaaaggagg 244
              |||||||||||||||||||||
Sbjct: 173601 gatttaagaagaaaaaggagg 173581
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>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence
          Length = 208348

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    atgtacacaaaatgcaaatt 60
             ||||||||||||||||||||
Sbjct: 53562 atgtacacaaaatgcaaatt 53581
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>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence
          Length = 194641

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  tttaagaagaaaaaggagga 245
            ||||||||||||||||||||
Sbjct: 8592 tttaagaagaaaaaggagga 8573
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>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078F08, complete sequence
          Length = 165440

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aatgcaaatttgcagtaacc 70
             ||||||||||||||||||||
Sbjct: 99291 aatgcaaatttgcagtaacc 99272
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>gb|AC145996.3| Pan troglodytes BAC clone RP43-17D11 from 7, complete sequence
          Length = 183826

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   cagaaatagaaattcagttt 184
             ||||||||||||||||||||
Sbjct: 61954 cagaaatagaaattcagttt 61973
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>gb|AC131757.3| Mus musculus BAC clone RP24-210I7 from chromosome 3, complete sequence
          Length = 161869

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgtacacaaaatgcaaatt 60
             ||||||||||||||||||||
Sbjct: 34728 atgtacacaaaatgcaaatt 34709
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>emb|CR293499.22| Zebrafish DNA sequence from clone CH211-106H12 in linkage group 10,
             complete sequence
          Length = 110501

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   cattgtaaggatttgcagca 390
             ||||||||||||||||||||
Sbjct: 75399 cattgtaaggatttgcagca 75380
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>emb|CR847786.13| Zebrafish DNA sequence from clone DKEYP-9B4 in linkage group 13,
             complete sequence
          Length = 156551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     agtaatgacaactgcattag 28
             ||||||||||||||||||||
Sbjct: 48087 agtaatgacaactgcattag 48068
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>emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chromosome 6, complete
              sequence
          Length = 133565

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     aaagagcacatgtacacaaa 51
              ||||||||||||||||||||
Sbjct: 123011 aaagagcacatgtacacaaa 123030
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>gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, complete sequence
          Length = 182161

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   tttaagaagaaaaaggagga 245
             ||||||||||||||||||||
Sbjct: 59630 tttaagaagaaaaaggagga 59611
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>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 267509

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    tttaagaagaaaaaggagga 245
              ||||||||||||||||||||
Sbjct: 225485 tttaagaagaaaaaggagga 225466
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>emb|AJ489252.1|ECH489252 Erwinia chrysanthemi phoP gene and phoQ gene
          Length = 2853

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 tgagaaccagaatcggtagc 344
           ||||||||||||||||||||
Sbjct: 759 tgagaaccagaatcggtagc 740
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>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence
          Length = 234359

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   aaggcatatctgactagcca 149
             ||||||||||||||||||||
Sbjct: 25174 aaggcatatctgactagcca 25155
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>emb|AJ811729.1| Corallococcus coralloides partial gyrB gene for gyrase B, strain
           DSM 52496
          Length = 1158

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 tgtccgcagtcatctccgtc 265
           ||||||||||||||||||||
Sbjct: 634 tgtccgcagtcatctccgtc 653
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>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194991

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ggcgccccaggaactgtgcg 307
              ||||||||||||||||||||
Sbjct: 122054 ggcgccccaggaactgtgcg 122073
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>emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in linkage group 17,
              complete sequence
          Length = 161395

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    cattgtaaggatttgcagca 390
              ||||||||||||||||||||
Sbjct: 159372 cattgtaaggatttgcagca 159353
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       aatgcaaatttgcagtaacc 70
                ||||||||||||||||||||
Sbjct: 18519976 aatgcaaatttgcagtaacc 18519957
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>gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, complete sequence
          Length = 164620

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 383    ttgcagcataattggcattaggat 406
              |||||||| |||||||||||||||
Sbjct: 125600 ttgcagcacaattggcattaggat 125577
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>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence
          Length = 207128

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    aaggcatatctgactagcca 149
              ||||||||||||||||||||
Sbjct: 130452 aaggcatatctgactagcca 130433
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>gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3, complete sequence
          Length = 180068

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ggcgccccaggaactgtgcg 307
            ||||||||||||||||||||
Sbjct: 6661 ggcgccccaggaactgtgcg 6642
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>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18,
            complete sequence
          Length = 179945

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  cattgtaaggatttgcagca 390
            ||||||||||||||||||||
Sbjct: 6201 cattgtaaggatttgcagca 6220
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>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21,
             complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   cattgtaaggatttgcagca 390
             ||||||||||||||||||||
Sbjct: 68555 cattgtaaggatttgcagca 68536
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>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8
          Length = 62420

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tgcattaggtgaaagagcacatgt 44
             ||||||||| ||||||||||||||
Sbjct: 47464 tgcattaggagaaagagcacatgt 47441
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>emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in linkage group 20,
              complete sequence
          Length = 212105

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    cattgtaaggatttgcagca 390
              ||||||||||||||||||||
Sbjct: 181827 cattgtaaggatttgcagca 181808
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>emb|BX957315.10| Zebrafish DNA sequence from clone CH211-254E15 in linkage group 19,
             complete sequence
          Length = 139744

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   agcatttacttgattcatgc 361
             ||||||||||||||||||||
Sbjct: 39036 agcatttacttgattcatgc 39017
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     agaaatagaaattcagtttg 185
               ||||||||||||||||||||
Sbjct: 1738449 agaaatagaaattcagtttg 1738430
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       aatgcaaatttgcagtaacc 70
                ||||||||||||||||||||
Sbjct: 18679377 aatgcaaatttgcagtaacc 18679358
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>emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in linkage group 10,
              complete sequence
          Length = 155394

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    cattgtaaggatttgcagca 390
              ||||||||||||||||||||
Sbjct: 146487 cattgtaaggatttgcagca 146468
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>gb|AF001958.1|AF001958 Ambystoma tigrinum electrogenic Na+ bicarbonate cotransporter (NBC)
            mRNA, complete cds
          Length = 4202

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  taagaagaaaaaggaggatg 247
            ||||||||||||||||||||
Sbjct: 3034 taagaagaaaaaggaggatg 3053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,299,763
Number of Sequences: 3902068
Number of extensions: 4299763
Number of successful extensions: 92835
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92663
Number of HSP's gapped (non-prelim): 170
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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