ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet65e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA 274 2e-70
2ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group... 274 2e-70
3dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
4dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
5gb|AY103792.1| Zea mays PCO149739 mRNA sequence 218 1e-53
6gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence 208 1e-50
7gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence 208 1e-50
8gb|BT016870.1| Zea mays clone Contig703 mRNA sequence 198 1e-47
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
10dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
11ref|NM_213093.1| Danio rerio zgc:66068 (zgc:66068), mRNA 50 0.006
12gb|BC056559.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:66068... 50 0.006
13gb|BC066475.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:77478... 50 0.006
14emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chr... 44 0.39
15gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome ... 44 0.39
16ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphosphool... 42 1.5
17emb|CT010564.2| Xenopus tropicalis finished cDNA, clone TEgg091c22 42 1.5
18emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chr... 42 1.5
19gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-phospho... 42 1.5
20gb|AY034944.1| Arabidopsis thaliana putative dolichyl-di-phospho... 42 1.5
21gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_7 mRN... 42 1.5
22gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4... 42 1.5
23emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cDNA Co... 42 1.5
24emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cDNA Co... 42 1.5
25emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cDNA Co... 42 1.5
26gb|AC009080.8| Homo sapiens chromosome 16 clone RP11-341K23, com... 42 1.5
27gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, complete s... 42 1.5
28gb|AC024810.1| Caenorhabditis elegans cosmid Y54E10A, complete s... 42 1.5
29emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in... 42 1.5
30gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, co... 40 6.1
31gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, co... 40 6.1
32gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
33gb|AC140196.3| Mus musculus BAC clone RP24-267C3 from chromosome... 40 6.1
34gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, co... 40 6.1
35gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
36gb|U55857.1| Caenorhabditis elegans cosmid K08D10, complete sequ... 40 6.1
37emb|BX323064.13| Zebrafish DNA sequence from clone DKEYP-13D12 i... 40 6.1
38emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 ... 40 6.1
39emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in... 40 6.1
40emb|BX510939.5| Zebrafish DNA sequence from clone CH211-78C9 in ... 40 6.1
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42gb|AC131599.2| Lemur catta, clone -206F2, complete sequence 40 6.1
43gb|AC116868.9| Mus musculus chromosome 1, clone RP24-414I2, comp... 40 6.1
44emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 ... 40 6.1
45gb|AC150898.2| Mus musculus BAC clone RP23-196E12 from 19, compl... 40 6.1
46emb|BX004884.10| Zebrafish DNA sequence from clone DKEY-6N6 in l... 40 6.1
47gb|AC108818.11| Mus musculus chromosome 7, clone RP23-474B17, co... 40 6.1
48gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome ... 40 6.1 
>ref|XM_477102.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1570

 Score =  274 bits (138), Expect = 2e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                        
Query: 185  atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 244
            ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 1371 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1312

                                                                        
Query: 245  tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 304
            |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | |||
Sbjct: 1311 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1252

                                                                        
Query: 305  cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 364
            |||||| || ||||||||||||||||| | ||||||||  ||||| ||||||||||| ||
Sbjct: 1251 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1192

                                                                      
Query: 365  gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 422
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1191 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaa 1134
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>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA
          Length = 1648

 Score =  274 bits (138), Expect = 2e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                        
Query: 185  atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 244
            ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 1378 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1319

                                                                        
Query: 245  tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 304
            |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | |||
Sbjct: 1318 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1259

                                                                        
Query: 305  cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 364
            |||||| || ||||||||||||||||| | ||||||||  ||||| ||||||||||| ||
Sbjct: 1258 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1199

                                                                      
Query: 365  gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 422
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1198 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaa 1141
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>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full
            insert sequence
          Length = 1570

 Score =  274 bits (138), Expect = 2e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                        
Query: 185  atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 244
            ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 1371 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1312

                                                                        
Query: 245  tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 304
            |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | |||
Sbjct: 1311 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1252

                                                                        
Query: 305  cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 364
            |||||| || ||||||||||||||||| | ||||||||  ||||| ||||||||||| ||
Sbjct: 1251 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1192

                                                                      
Query: 365  gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 422
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1191 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaa 1134
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>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full
            insert sequence
          Length = 1648

 Score =  274 bits (138), Expect = 2e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                        
Query: 185  atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 244
            ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 1378 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1319

                                                                        
Query: 245  tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 304
            |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | |||
Sbjct: 1318 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1259

                                                                        
Query: 305  cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 364
            |||||| || ||||||||||||||||| | ||||||||  ||||| ||||||||||| ||
Sbjct: 1258 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1199

                                                                      
Query: 365  gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 422
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1198 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaa 1141
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>gb|AY103792.1| Zea mays PCO149739 mRNA sequence
          Length = 2093

 Score =  218 bits (110), Expect = 1e-53
 Identities = 200/230 (86%)
 Strand = Plus / Minus

                                                                        
Query: 195  tatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgag 254
            |||||||| ||||||||| |||  ||||||| |||||| || ||||||||||||||||||
Sbjct: 1683 tatttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgag 1624

                                                                        
Query: 255  gcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggc 314
            ||||  ||||||||  ||||||| |||||||| ||||||||||| | ||| ||||| || 
Sbjct: 1623 gcagtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaagga 1564

                                                                        
Query: 315  cgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaact 374
            || |||||||||||||||| || ||| |  ||||| ||||| || |||||||||||||||
Sbjct: 1563 cgtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaact 1504

                                                              
Query: 375  ttgaactggaaaactccataaacatccggaactttgaaggatgctgaata 424
            |||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 1503 ttgaactggaaaactccataaacatctggaactttgaaggttgttgaata 1454
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>gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence
          Length = 1602

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Minus

                                                                        
Query: 196  atttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgagg 255
            ||||||| ||||||||| |||  ||||||| |||||| || |||||||||||||||||||
Sbjct: 1327 atttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgagg 1268

                                                                        
Query: 256  cagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggcc 315
            | |  ||||||||  ||||||| |||||||| ||||||||||| | ||| ||||| || |
Sbjct: 1267 cggtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaaggac 1208

                                                                        
Query: 316  gcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactt 375
            | |||||||||||||||| || ||| |  ||||| ||||| || ||||||||||||||||
Sbjct: 1207 gtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaactt 1148

                                                             
Query: 376  tgaactggaaaactccataaacatccggaactttgaaggatgctgaata 424
            ||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 1147 tgaactggaaaactccataaacatctggaactttgaaggttgttgaata 1099
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>gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence
          Length = 1151

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Minus

                                                                       
Query: 196 atttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgagg 255
           ||||||| ||||||||| |||  ||||||| |||||| || |||||||||||||||||||
Sbjct: 841 atttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgagg 782

                                                                       
Query: 256 cagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggcc 315
           | |  ||||||||  ||||||| |||||||| ||||||||||| | ||| ||||| || |
Sbjct: 781 cggtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaaggac 722

                                                                       
Query: 316 gcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactt 375
           | |||||||||||||||| || ||| |  ||||| ||||| || ||||||||||||||||
Sbjct: 721 gtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaactt 662

                                                            
Query: 376 tgaactggaaaactccataaacatccggaactttgaaggatgctgaata 424
           ||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 661 tgaactggaaaactccataaacatctggaactttgaaggttgttgaata 613
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>gb|BT016870.1| Zea mays clone Contig703 mRNA sequence
          Length = 911

 Score =  198 bits (100), Expect = 1e-47
 Identities = 163/184 (88%)
 Strand = Plus / Minus

                                                                       
Query: 243 gttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtca 302
           ||||||||||||||||  ||||||||  ||||||| |||||||||||||||||||||| |
Sbjct: 358 gttgaaaatgaggcagtgtagtatgggtacgctgatgttatgaacctctcatactcgtta 299

                                                                       
Query: 303 tgcctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctt 362
           |||||||| || ||||||||||||||||||| || ||| |  ||||| ||||| ||||| 
Sbjct: 298 tgcctgtaagggcgcactggaatctgctttgtaaaagacaaaccagtatatcccagcctc 239

                                                                       
Query: 363 tggtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 422
           ||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||| 
Sbjct: 238 tggtactcaactttgaactggaaaactccgtagacatcaggaactttgaaggatgttgag 179

               
Query: 423 tata 426
           ||||
Sbjct: 178 tata 175



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 195 tatttgtgatacaggtacgcaactgagaatatgaagaa 232
           |||||||| ||||||||| |||  ||||||||||||||
Sbjct: 607 tatttgtggtacaggtacacaagcgagaatatgaagaa 570
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  129 bits (65), Expect = 8e-27
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                           
Query: 326     ctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactttgaactggaa 385
               |||||| | ||||||||  ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 5921221 ctgcttagaaagagagagaccagtatatccaagcctctggtactcaactttgaactggaa 5921162

                                                    
Query: 386     aactccataaacatccggaactttgaaggatgctgaa 422
               ||||||||||||||| |||||||||||||||| ||||
Sbjct: 5921161 aactccataaacatctggaactttgaaggatgttgaa 5921125



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                           
Query: 242     tgttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtc 301
               ||||||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | 
Sbjct: 5921416 tgttgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcatt 5921357

                                           
Query: 302     atgcctgtatggccgcactggaatctgc 329
               ||||||||| || |||||||||||||||
Sbjct: 5921356 atgcctgtaagggcgcactggaatctgc 5921329



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                        
Query: 185     atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccat 241
               ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||
Sbjct: 5921692 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccat 5921636
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score =  129 bits (65), Expect = 8e-27
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                         
Query: 326   ctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactttgaactggaa 385
             |||||| | ||||||||  ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 63669 ctgcttagaaagagagagaccagtatatccaagcctctggtactcaactttgaactggaa 63610

                                                  
Query: 386   aactccataaacatccggaactttgaaggatgctgaa 422
             ||||||||||||||| |||||||||||||||| ||||
Sbjct: 63609 aactccataaacatctggaactttgaaggatgttgaa 63573



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 242   tgttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtc 301
             ||||||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | 
Sbjct: 63864 tgttgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcatt 63805

                                         
Query: 302   atgcctgtatggccgcactggaatctgc 329
             ||||||||| || |||||||||||||||
Sbjct: 63804 atgcctgtaagggcgcactggaatctgc 63777



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 185   atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccat 241
             ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||
Sbjct: 64140 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccat 64084
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>ref|NM_213093.1| Danio rerio zgc:66068 (zgc:66068), mRNA
          Length = 1845

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 369  tcaactttgaactggaaaactccataaacatccggaa 405
            |||||||||||||| ||||||||||| ||||| ||||
Sbjct: 1194 tcaactttgaactgaaaaactccatatacatcaggaa 1158
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>gb|BC056559.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:66068 IMAGE:6795586),
            complete cds
          Length = 1850

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 369  tcaactttgaactggaaaactccataaacatccggaa 405
            |||||||||||||| ||||||||||| ||||| ||||
Sbjct: 1206 tcaactttgaactgaaaaactccatatacatcaggaa 1170
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>gb|BC066475.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:77478 IMAGE:6524103),
            complete cds
          Length = 1845

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 369  tcaactttgaactggaaaactccataaacatccggaa 405
            |||||||||||||| ||||||||||| ||||| ||||
Sbjct: 1194 tcaactttgaactgaaaaactccatatacatcaggaa 1158
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>emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chromosome 13, complete
              sequence
          Length = 174127

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 321    ggaatctgctttgcaagagaga 342
              ||||||||||||||||||||||
Sbjct: 140229 ggaatctgctttgcaagagaga 140250
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>gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome 13, complete sequence
          Length = 182356

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 321   ggaatctgctttgcaagagaga 342
             ||||||||||||||||||||||
Sbjct: 94623 ggaatctgctttgcaagagaga 94602
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>ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphosphooligosaccharide-protein
            glycotransferase AT5G66680 (DGL1) mRNA, complete cds
          Length = 1696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1306 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1254
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>emb|CT010564.2| Xenopus tropicalis finished cDNA, clone TEgg091c22
          Length = 1852

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 375  ttgaactggaaaactccataaacatccgg 403
            ||||||||||| || ||||||||||||||
Sbjct: 1240 ttgaactggaacacaccataaacatccgg 1212
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>emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 150972

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   ttattacatcacaattctatc 157
             |||||||||||||||||||||
Sbjct: 26211 ttattacatcacaattctatc 26231
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>gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide
            glycotransferase (oligosaccharyltransferase) (At5g66680)
            mRNA, complete cds
          Length = 1345

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1220 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1168
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>gb|AY034944.1| Arabidopsis thaliana putative
            dolichyl-di-phosphooligosaccharide-protein
            glycotransferase (At5g66680) mRNA, complete cds
          Length = 1608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1306 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1254
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>gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_7 mRNA, complete cds
          Length = 1544

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1261 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1209
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>gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4, complete sequence
          Length = 201907

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 345   ccagtgtatccaagcctttgg 365
             |||||||||||||||||||||
Sbjct: 32511 ccagtgtatccaagcctttgg 32531
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>emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS47ZF06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1640

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1248 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1196
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>emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL20ZC05 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1468

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1242 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1190
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>emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZA03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1260 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1208
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>gb|AC009080.8| Homo sapiens chromosome 16 clone RP11-341K23, complete sequence
          Length = 178099

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 26    aaaattagcaaaaatgttaacaaaa 50
             ||||||||||||||||||| |||||
Sbjct: 53582 aaaattagcaaaaatgttaccaaaa 53606
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>gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, complete sequence
          Length = 1540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 288  ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 340
            ||||||||||| |  || ||||| |||||||| ||||||||||| | ||||||
Sbjct: 1259 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1207
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>gb|AC024810.1| Caenorhabditis elegans cosmid Y54E10A, complete sequence
          Length = 101640

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ctgaaaattagcaaaaatgtt 43
             |||||||||||||||||||||
Sbjct: 64664 ctgaaaattagcaaaaatgtt 64644
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>emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in linkage group 20,
              complete sequence
          Length = 225515

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     caaaaatgttaacaaaagttg 54
              |||||||||||||||||||||
Sbjct: 138228 caaaaatgttaacaaaagttg 138208
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>gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, complete sequence
          Length = 153713

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   gaagaaggctcccattgttgaaaa 250
             |||||||||||||| |||||||||
Sbjct: 20839 gaagaaggctcccactgttgaaaa 20862
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>gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, complete sequence
          Length = 204025

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     actgaaaattagcaaaaatgttaa 45
              |||| |||||||||||||||||||
Sbjct: 159050 actgtaaattagcaaaaatgttaa 159027
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>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    caaaaatgttaacaaaagtt 53
             ||||||||||||||||||||
Sbjct: 47601 caaaaatgttaacaaaagtt 47620
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>gb|AC140196.3| Mus musculus BAC clone RP24-267C3 from chromosome 7, complete sequence
          Length = 183537

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    acaaaagttgggggcaggga 64
             ||||||||||||||||||||
Sbjct: 28916 acaaaagttgggggcaggga 28897
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>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence
          Length = 206903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     aaaattagcaaaaatgttaa 45
              ||||||||||||||||||||
Sbjct: 123126 aaaattagcaaaaatgttaa 123145
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07,
              complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caaaaatgttaacaaaagtt 53
              ||||||||||||||||||||
Sbjct: 114502 caaaaatgttaacaaaagtt 114521
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>gb|U55857.1| Caenorhabditis elegans cosmid K08D10, complete sequence
          Length = 32640

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aaaattagcaaaaatgttaa 45
             ||||||||||||||||||||
Sbjct: 24062 aaaattagcaaaaatgttaa 24081
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>emb|BX323064.13| Zebrafish DNA sequence from clone DKEYP-13D12 in linkage group 2,
              complete sequence
          Length = 170480

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     ttagcaaaaatgttaacaaa 49
              ||||||||||||||||||||
Sbjct: 106513 ttagcaaaaatgttaacaaa 106532
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>emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 in linkage group 21,
             complete sequence
          Length = 205143

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aaaatgttaacaaaagttgg 55
             ||||||||||||||||||||
Sbjct: 38080 aaaatgttaacaaaagttgg 38061
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>emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in linkage group 9,
              complete sequence
          Length = 173526

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     aaaatgttaacaaaagttgg 55
              ||||||||||||||||||||
Sbjct: 143129 aaaatgttaacaaaagttgg 143110
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>emb|BX510939.5| Zebrafish DNA sequence from clone CH211-78C9 in linkage group 16,
              complete sequence
          Length = 163843

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaaaatgttaacaaaagttg 54
              ||||||||||||||||||||
Sbjct: 141525 aaaaatgttaacaaaagttg 141544
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      caaaaatgttaacaaaagtt 53
               ||||||||||||||||||||
Sbjct: 6743340 caaaaatgttaacaaaagtt 6743359
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>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence
          Length = 155606

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaaaatgttaacaaaagttg 54
              ||||||||||||||||||||
Sbjct: 148777 aaaaatgttaacaaaagttg 148796
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>gb|AC116868.9| Mus musculus chromosome 1, clone RP24-414I2, complete sequence
          Length = 161154

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    gaagaaggctcccattgttgaaaa 250
              |||||||||||||| |||||||||
Sbjct: 139134 gaagaaggctcccactgttgaaaa 139157
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>emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 in linkage group 20,
              complete sequence
          Length = 159094

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     aaaatgttaacaaaagttgg 55
              ||||||||||||||||||||
Sbjct: 149199 aaaatgttaacaaaagttgg 149218
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>gb|AC150898.2| Mus musculus BAC clone RP23-196E12 from 19, complete sequence
          Length = 231474

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     gttgggggcagggaacccca 70
              ||||||||||||||||||||
Sbjct: 150295 gttgggggcagggaacccca 150276
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>emb|BX004884.10| Zebrafish DNA sequence from clone DKEY-6N6 in linkage group 8, complete
              sequence
          Length = 225442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aaaaatgttaacaaaagttg 54
              ||||||||||||||||||||
Sbjct: 220292 aaaaatgttaacaaaagttg 220273
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>gb|AC108818.11| Mus musculus chromosome 7, clone RP23-474B17, complete sequence
          Length = 180498

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    acaaaagttgggggcaggga 64
             ||||||||||||||||||||
Sbjct: 76631 acaaaagttgggggcaggga 76650
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>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence
          Length = 247216

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gttgggggcagggaacccca 70
              ||||||||||||||||||||
Sbjct: 209975 gttgggggcagggaacccca 209994


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,199,185
Number of Sequences: 3902068
Number of extensions: 4199185
Number of successful extensions: 77038
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76927
Number of HSP's gapped (non-prelim): 111
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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