Clone Information

BLAST Search Result

Clone Name	rbaet65e01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel bet...	117	1e-26
2	KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni...	59	4e-09
3	KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu...	59	4e-09
4	KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu...	59	4e-09
5	KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu...	59	4e-09
6	KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu...	59	4e-09
7	KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu...	59	4e-09
8	KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu...	59	8e-09
9	KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subuni...	57	2e-08
10	KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subu...	57	2e-08
11	KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subu...	57	2e-08
12	KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subu...	57	2e-08
13	KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subu...	55	6e-08
14	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	53	3e-07
15	KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subu...	50	3e-06
16	KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subuni...	50	4e-06
17	KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subu...	46	5e-05
18	YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ	40	0.002
19	IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protei...	40	0.002
20	YGHZ_ECOLI (Q46851) Hypothetical protein yghZ	40	0.003
21	YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)	39	0.006
22	YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)	39	0.008
23	NPFF_BOVIN (Q9TUX7) FMRFamide-related peptides precursor [Contai...	38	0.011
24	EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing...	34	0.20
25	EWS_MOUSE (Q61545) RNA-binding protein EWS	34	0.20
26	RESIL_DROME (Q9V7U0) Pro-resilin precursor	33	0.26
27	YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)	33	0.45
28	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	32	0.76
29	LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related pr...	31	1.3
30	YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)	31	1.7
31	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	30	2.9
32	OVO_DROME (P51521) Protein ovo (Protein shaven baby)	30	2.9
33	PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-c...	30	2.9
34	LTK_MOUSE (P08923) Leukocyte tyrosine kinase receptor precursor ...	30	3.8
35	SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane ...	30	3.8
36	PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subu...	30	3.8
37	ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus en...	30	3.8
38	ZBP1_HUMAN (Q9H171) Z-DNA-binding protein 1 (Tumor stroma and ac...	29	4.9
39	SRCA_HUMAN (Q86TD4) Sarcalumenin precursor	29	4.9
40	TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki...	29	4.9
41	VG48_SHV21 (Q01033) Hypothetical gene 48 protein	29	6.4
42	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	29	6.4
43	T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-relate...	29	6.4
44	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	29	6.4
45	RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (...	29	6.4
46	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	29	6.4
47	SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD...	29	6.4
48	RS6_RHOCA (O68126) 30S ribosomal protein S6	29	6.4
49	DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)	29	6.4
50	PUF6_YEAST (Q04373) Protein PUF6	28	8.4
51	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	28	8.4
52	TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16	28	8.4
53	FBRL_GIALA (Q24957) Fibrillarin	28	8.4
54	PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Saliv...	28	8.4
55	PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precur...	28	8.4

>KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel beta subunit|
           (K(+) channel beta subunit)
          Length = 328

 Score =  117 bits (293), Expect = 1e-26
 Identities = 61/79 (77%), Positives = 65/79 (82%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           KVNGLKPIASELGVS+AQL IAWCASNPNVSSVITGATKE+QIVENMKA           
Sbjct: 250 KVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLLTPEV 309

Query: 275 XEKIEAVIQSKPKRLESYR 219
            +KIEAV+QSKPKR ESYR
Sbjct: 310 VDKIEAVVQSKPKRTESYR 328

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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 400 VNEIDNILRNKPYSKKDYR 418

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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 400 VNEIDNILRNKPYSKKDYR 418

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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 329 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 388

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++++KP   + YR
Sbjct: 389 VNEIDNILRNKPYSKKDYR 407

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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 27/79 (34%), Positives = 43/79 (54%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L PIA  LG ++ QL +AWC  N  VSSV+ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHI 381

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++ +KP   + YR
Sbjct: 382 VNEIDNILGNKPYSKKDYR 400

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>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/79 (35%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L+ IA  LG ++ QL IAWC  N  VSSV+ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I++++ +KP   + YR
Sbjct: 348 VHEIDSILGNKPYSKKDYR 366

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>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein
           F5)
          Length = 367

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/79 (35%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L+ IA  LG ++ QL IAWC  N  VSSV+ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I++++ +KP   + YR
Sbjct: 348 VHEIDSILGNKPYSKKDYR 366

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>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (HKvbeta2)
          Length = 367

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/79 (35%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L+ IA  LG ++ QL IAWC  N  VSSV+ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSI 347

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I++++ +KP   + YR
Sbjct: 348 IHEIDSILGNKPYSKKDYR 366

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>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/79 (35%), Positives = 44/79 (55%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+  L+ IA  LG ++ QL IAWC  N  VSSV+ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQVLPKLSSSI 347

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I++++ +KP   + YR
Sbjct: 348 IHEIDSILGNKPYSKKDYR 366

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>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           K+   + IA  LG ++ QL IAWC  N  VSSV+ GA+   Q++EN+ A           
Sbjct: 288 KLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQVLPKLSSSI 347

Query: 275 XEKIEAVIQSKPKRLESYR 219
             +I+ ++ +KP   + YR
Sbjct: 348 IHEIDGILGNKPYSKKDYR 366

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           KV  L P+A +LG ++AQL IAWC  +  VSSV+ G +   Q++E++ A           
Sbjct: 329 KVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLGALQVLSQLTPQT 388

Query: 275 XEKIEAVIQSKP 240
             +I+ ++ +KP
Sbjct: 389 VMEIDGLLGNKP 400

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>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           KV  L PIA  L  ++ QL IAWC  +  VSSV+ G +   Q++EN+ A           
Sbjct: 322 KVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQVLPHLTPQL 381

Query: 275 XEKIEAVIQSKP 240
             +I+ ++ +KP
Sbjct: 382 VTEIDQILGNKP 393

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>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3) (RCK beta3)
          Length = 404

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           +V  L PIA +LG ++AQL IAWC  +  VSSV+ G +   Q++E++ +           
Sbjct: 329 RVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLGQLTPQT 388

Query: 275 XEKIEAVIQSK 243
             +I+A++ +K
Sbjct: 389 VMEIDALLGNK 399

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>KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 249

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 22/71 (30%), Positives = 39/71 (54%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 276
           +V  L P A +LG ++ QL IAWC  +  VSSV+ G +   Q++E++ +           
Sbjct: 174 RVMDLLPTARQLGCTVGQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLSQLTPQT 233

Query: 275 XEKIEAVIQSK 243
             +I+A++ +K
Sbjct: 234 VVEIDALLGNK 244

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>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ|
          Length = 346

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/45 (37%), Positives = 30/45 (66%)
 Frame = -3

Query: 443 LKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 309
           L  +A + G SMAQ+ ++W   +  V+SV+ GA++  Q+ EN++A
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQA 314

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>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)|
           (VEG147) (AKR11A)
          Length = 310

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMK 312
           KVN L PIA +  V +  + +AW  + P +  +I GA +  Q+++N+K
Sbjct: 244 KVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIK 291

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>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ|
          Length = 346

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/45 (37%), Positives = 30/45 (66%)
 Frame = -3

Query: 443 LKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 309
           L  +A + G SMAQ+ ++W   +  V+SV+ GA++  Q+ EN++A
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQA 314

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>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)|
          Length = 310

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -3

Query: 455 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMK 312
           KV+ LK +A E     A + +AW  + P + ++I GA +  Q+ +N+K
Sbjct: 244 KVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLK 291

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>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)|
          Length = 324

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = -3

Query: 443 LKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 309
           L  ++ ELG + AQ+ +AW  S P +++ I G ++E Q+ E + A
Sbjct: 254 LTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNA 298

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>NPFF_BOVIN (Q9TUX7) FMRFamide-related peptides precursor [Contains:|
           Neuropeptide SF (NPSF); Neuropeptide FF (NPFF);
           Neuropeptide AF (NPAF)]
          Length = 115

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 330 DRGEHEGPGGRPAADSGGPGEDRGGHPEQ-AQAPRVVQMKHSVLSAVQRVPSTWWDFFPG 154
           D    EGPGGR   D     ED G HP Q AQ PR   +  S+L A+QR         PG
Sbjct: 18  DWSHAEGPGGRDGGDQIFMEEDSGAHPAQDAQTPR--SLLRSLLQAMQR---------PG 66

Query: 153 RS 148
           RS
Sbjct: 67  RS 68

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>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma|
           breakpoint region 1 protein)
          Length = 656

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = -2

Query: 333 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFF 160
           P RG   GPGG   P    GG G DRGG P   + PR  +   S    VQ     W    
Sbjct: 469 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 526

Query: 159 PGRSISLYLVF*NYTWLLLCSRC 91
           PG          N+ W   C++C
Sbjct: 527 PGCGNQ------NFAWRTECNQC 543

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>EWS_MOUSE (Q61545) RNA-binding protein EWS|
          Length = 655

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = -2

Query: 333 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFF 160
           P RG   GPGG   P    GG G DRGG P   + PR  +   S    VQ     W    
Sbjct: 468 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 525

Query: 159 PGRSISLYLVF*NYTWLLLCSRC 91
           PG          N+ W   C++C
Sbjct: 526 PGCGNQ------NFAWRTECNQC 542

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>RESIL_DROME (Q9V7U0) Pro-resilin precursor|
          Length = 620

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = -2

Query: 348 GHQRKPDR-----GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 232
           G  +KP       G   G GGRP++  G PG   GG P  +  P
Sbjct: 274 GQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317



 Score = 31.6 bits (70), Expect = 0.99
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 333 PDRGEHEGPGGRPAADSGGPGEDRGG 256
           P  G   G GGRP++  G PG+ +GG
Sbjct: 236 PGGGNGNGSGGRPSSSYGAPGQGQGG 261



 Score = 31.6 bits (70), Expect = 0.99
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 312 GPGGRPAADSGGPGEDRGGHPEQA 241
           GPGGRP+   G PG   GG P  +
Sbjct: 40  GPGGRPSDSYGAPGGGNGGRPSDS 63



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 333 PDRGEHEGPGGRPAADSGGPGEDRGGHP 250
           P +G+  G GGR ++  G PG   GG P
Sbjct: 156 PGQGQGNGNGGRSSSSYGAPGGGNGGRP 183



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 324 GEHEGPGGRPAADSGGPGEDRGGHP 250
           G   G GGRP++  G PG   GG P
Sbjct: 92  GGGNGNGGRPSSSYGAPGGGNGGRP 116

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>YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)|
          Length = 306

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = -3

Query: 416 VSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 309
           +SM +  + +  + P V+SVITGA+K  Q+ EN++A
Sbjct: 243 LSMTEKSLQYLLAQPAVASVITGASKIEQLRENIQA 278

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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -2

Query: 351 RGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKH 211
           R + +K   G   G GG   A SGGPG   GG   Q+Q     Q KH
Sbjct: 414 RPYAKKGPGGARPGTGGPVGARSGGPGRGAGGGQGQSQGQG--QRKH 458

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>LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related protein 12|
           precursor
          Length = 858

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -2

Query: 312 GPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPS--TWWDFFPGRSIS 142
           G GG  +A S   G   G      +AP V   +H + SA+ R+     W  F  GRS S
Sbjct: 690 GSGGNSSAQSTRGGHADGREVSSVEAPSVSPARHQLTSALSRMTQGLRWVRFTLGRSSS 748

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>YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)|
          Length = 326

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -3

Query: 440 KPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 309
           +P+ +    ++  L +AW     ++ S+++GAT   Q+ EN+ A
Sbjct: 261 QPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAA 304

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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 9/39 (23%)
 Frame = -2

Query: 312 GPGGRPAADS---------GGPGEDRGGHPEQAQAPRVV 223
           GPGGRP  D          GG G  RGG P++    RV+
Sbjct: 88  GPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVI 126

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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 324 GEHEGPGGRPAADSGGPGEDRGGH 253
           G   GPGG P+A+SGG G   GG+
Sbjct: 585 GGASGPGGGPSANSGGGGGGGGGN 608

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>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 333  PDRGEHEGPGGRPAADS-GGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 184
            P+ G H G G   +++    PG+ R  HP+ ++ P V +  H   S  Q V
Sbjct: 1158 PECGPHPGTGWDGSSEHLCSPGKSREVHPDSSETPTVAEQVHQPESLSQPV 1208

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>LTK_MOUSE (P08923) Leukocyte tyrosine kinase receptor precursor (EC 2.7.10.1)|
          Length = 888

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 14/55 (25%)
 Frame = -2

Query: 351 RGHQRKPDRGEHE-------------GPGGRPAADSGGPG-EDRGGHPEQAQAPR 229
           R ++R+PDRG  +             G GGR  A  GG G   R   P+  ++PR
Sbjct: 234 RSYRRRPDRGRTQAVPERLETRAAAPGSGGRGGAAGGGSGWTSRAHSPQAGRSPR 288

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>SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane protein 1)|
           (SMP-1) (HSD-1) (Sperm membrane protein BS-84)
          Length = 426

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 333 PDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 232
           P  G   GPG  P +   GPG   G HP  A  P
Sbjct: 169 PGSGSGPGPGSGPGS---GPGHGSGSHPGPASGP 199

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>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like|
           protein ST-
          Length = 1019

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -2

Query: 357 DHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHP 250
           DH    R+P  G HE  G R      GPG  R GHP
Sbjct: 802 DHLRVPRRPGPGRHEEGGRRHQRP--GPGRPRRGHP 835

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>ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus enhancer|
           activator 3) (PEA3 protein)
          Length = 555

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -2

Query: 348 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWW 169
           GH   P     + PG + +A + GPG   GG     +     +MK   L   QRVP T+ 
Sbjct: 42  GHAEHPPAAPAQTPGPQVSASARGPGPVAGGSGRMER-----RMKGGYLD--QRVPYTFC 94

Query: 168 DFFPG 154
              PG
Sbjct: 95  SKSPG 99

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>ZBP1_HUMAN (Q9H171) Z-DNA-binding protein 1 (Tumor stroma and activated|
           macrophage protein DLM-1)
          Length = 429

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 312 GPGGRPAADSGGPGEDRGGHPEQAQA 235
           GPGG   +  G PGED G  P   Q+
Sbjct: 348 GPGGVAGSGEGEPGEDAGRRPADTQS 373

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>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor|
          Length = 932

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 357 DHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQ 220
           D +  +   D+GE  GP    +A+ GG    + G  E++QAP + +
Sbjct: 257 DTQASEGTEDQGE-PGPAAEASAEPGGAQSVKAGDTEESQAPEMTE 301



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 321 EHEGPGGRPAADSGGPGEDRGGHPEQAQAP 232
           E   PG R   D+ GPGE++ G P  +  P
Sbjct: 104 ESPPPGERDDRDAAGPGEEKNGPPVASALP 133

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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 342 QRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 184
           +R P RG   GPG  P     GPG   GG P + + P   ++  S +S++ RV
Sbjct: 4   ERPPLRGPGPGPGEVPGEGPPGPG-GTGGGPGRGR-PSSYRVLRSAVSSLARV 54

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>VG48_SHV21 (Q01033) Hypothetical gene 48 protein|
          Length = 797

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 330 DRGEHEGPGGRPAADSGGPGEDRGGHPE 247
           D GE EG  G    D G  GED G   E
Sbjct: 648 DEGEDEGDEGEDEGDEGDEGEDEGDEGE 675

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
            SR-like protein RA4)
          Length = 1147

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
 Frame = -2

Query: 333  PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPR 229
            P  G    PGG P     GPG    EDR G  +  Q P+
Sbjct: 910  PPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 948

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>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible|
           leucine zipper protein 2) (Tsc-22-like protein THG-1)
          Length = 395

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -2

Query: 309 PGGRPAADSGGPGEDRGGHPEQAQAP----RVVQMKHSV 205
           P G P+ D GG G  R G P    AP    RVV++ H +
Sbjct: 44  PNGEPSPDPGGKGTPRNGSPPPG-APSSRFRVVKLPHGL 81

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = -2

Query: 318  HEGPGG---RPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFFPGRS 148
            H+GPG    R     GGP EDRGG       P             QRVP +      GRS
Sbjct: 1236 HDGPGTSEHREMEAPGGPSEDRGGKGRGGPGP------------AQRVPKS------GRS 1277

Query: 147  ISL 139
             SL
Sbjct: 1278 SSL 1280

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>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding|
           protein 56) (TAFII68) (TAF(II)68)
          Length = 592

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -2

Query: 351 RGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGH 253
           RG     DRG + G  G    D GG G DRGG+
Sbjct: 490 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGY 522

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -2

Query: 288 DSGGPGEDRG--GHPEQAQAPRVVQMKHSVLSAVQRVPST 175
           + G P E RG   HP Q Q+P++VQ +  V    Q+  S+
Sbjct: 109 EQGKPEEQRGLAKHPSQQQSPKLVQQQGPVKPTPQQTESS 148

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>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
 Frame = -2

Query: 333 PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPRVVQMK 214
           P  G    PGG P     GPG    EDR G  +Q Q  +  Q +
Sbjct: 803 PPHGPFVRPGGMPGLGGPGPGPGGSEDRDGRQQQPQQQQQQQQQ 846

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>RS6_RHOCA (O68126) 30S ribosomal protein S6|
          Length = 144

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
 Frame = -2

Query: 342 QRKPDRGEHEGPGGR-------PAADSGGPGEDRGGHPEQ 244
           Q++ DRG+ E  G R       P  D  GP EDRG  PE+
Sbjct: 105 QKRDDRGDREERGDRGDRGDRGPRGDR-GPREDRGPRPER 143

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>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 802

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 327 RGEHEGPGGRPAADSGGPGEDRGGHPEQAQ 238
           RG H  PG +  A+ G  GED GG   + Q
Sbjct: 712 RGRHGPPGQKRKAEDGDGGEDAGGKGRKDQ 741

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>PUF6_YEAST (Q04373) Protein PUF6|
          Length = 656

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -2

Query: 330 DRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTW 172
           D  EHE             G + G H EQ +  +  +M+    + VQ++ S W
Sbjct: 79  DSEEHENENEEKEGKDKSEGGENGNHTEQRKLLKERKMQRKSGTQVQQIKSVW 131

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/67 (26%), Positives = 24/67 (35%)
 Frame = -2

Query: 354  HRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPST 175
            HRGH  +    EH G  G P    GG     GGH            +H ++    R  + 
Sbjct: 868  HRGHDHRGPPHEHRGHDG-PGHGGGGHRGHDGGHSHGGDMSNRPVCRHFMMKGNCRYENN 926

Query: 174  WWDFFPG 154
               + PG
Sbjct: 927  CAFYHPG 933

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>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 157 WPVYLPVSGF---LKLYMAPPV*SVCSACETFCCRVGLMRTTPFV 32
           + VY P  G+   +   +AP +  V    +TF C VGLM+ T FV
Sbjct: 520 YAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFV 564

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>FBRL_GIALA (Q24957) Fibrillarin|
          Length = 327

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 348 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGG 256
           G  R   RG  +GPGGR     GGPG   GG
Sbjct: 62  GPDRGDRRGPRDGPGGR-----GGPGGPGGG 87

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>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 324 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 232
           G+ +GP  +   +  GP    GG+P+Q QAP
Sbjct: 330 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 360

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>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 324 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 232
           G+ +GP  +   +  GP    GG+P+Q QAP
Sbjct: 340 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 370


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,945,091
Number of Sequences: 219361
Number of extensions: 1351771
Number of successful extensions: 4972
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 4442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4940
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result