>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein
          Length = 470

 Score =  396 bits (200), Expect = e-107
 Identities = 216/220 (98%), Gaps = 1/220 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatgaacaagtggatgcatt-gagtcaccattggttcatattttacaaatcaccaagtcc 59
           |||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gatgtacaagtggatccatttgagtcaccattggttcatattttacaaatcaccaagtcc 397

                                                                       
Query: 60  cagcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 337

                                                                       
Query: 120 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcg 277

                                                   
Query: 180 tccattttgcagctgagctgacaaaaactgctcgaccacc 219
           ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 276 tccattttgcagctgagctgacagaaactgctcgaccacc 237

>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29
          Length = 1162

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 30   ttggttcatattttacaaatcaccaagtcccagc 63
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1104 ttggatcatatattacaaaccaccaagtcccagc 1071

>gb|AY103995.1| Zea mays PCO102677 mRNA sequence
          Length = 1225

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 30   ttggttcatattttacaaatcaccaagtcccagc 63
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1153 ttggatcatatattacaaaccaccaagtcccagc 1120

>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete
             sequence
          Length = 91854

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    cattggttcatattttacaaa 48
             |||||||||||||||||||||
Sbjct: 52509 cattggttcatattttacaaa 52489

>ref|XM_477163.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 267

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 157 ttcgttacacggacgcgcgttcgtccat 184
           ||||||||||||||| ||||||||||||
Sbjct: 27  ttcgttacacggacg-gcgttcgtccat 1

>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence
          Length = 225524

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgagctgacaaaaactgctc 212
             ||||||||||||||||||||
Sbjct: 67605 tgagctgacaaaaactgctc 67586

>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence
          Length = 212991

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tgagctgacaaaaactgctc 212
              ||||||||||||||||||||
Sbjct: 170294 tgagctgacaaaaactgctc 170275

>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    aaaccaaagcacgttcgtta 163
              ||||||||||||||||||||
Sbjct: 227818 aaaccaaagcacgttcgtta 227837

>gb|AC026101.24| Homo sapiens 3 BAC RP11-441D23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164728

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ttcatattttacaaatcacc 53
              ||||||||||||||||||||
Sbjct: 147265 ttcatattttacaaatcacc 147246

>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 142364

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgagctgacaaaaactgctc 212
              ||||||||||||||||||||
Sbjct: 134030 tgagctgacaaaaactgctc 134049

>gb|AC155720.7| Mus musculus 6 BAC RP24-151P23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 210211

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgagctgacaaaaactgctc 212
             ||||||||||||||||||||
Sbjct: 22004 tgagctgacaaaaactgctc 22023

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 157     ttcgttacacggacgcgcgttcgtccat 184
               ||||||||||||||| ||||||||||||
Sbjct: 7208546 ttcgttacacggacg-gcgttcgtccat 7208572

>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0016A21
          Length = 144076

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 157   ttcgttacacggacgcgcgttcgtccat 184
             ||||||||||||||| ||||||||||||
Sbjct: 49030 ttcgttacacggacg-gcgttcgtccat 49056

>dbj|AP000805.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-698L23, complete
             sequence
          Length = 180996

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    caccaagtcccagcagctct 69
             ||||||||||||||||||||
Sbjct: 38344 caccaagtcccagcagctct 38325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,998,623
Number of Sequences: 3902068
Number of extensions: 1998623
Number of successful extensions: 133327
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 133264
Number of HSP's gapped (non-prelim): 66
length of query: 219
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 197
effective length of database: 17,147,199,772
effective search space: 3377998355084
effective search space used: 3377998355084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)