>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 205      ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccagaagaagtactta 264
                ||||||||||| ||||| |||||||| || || ||||| |||||||||||||||||||| 
Sbjct: 25486841 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 25486900

                         
Query: 265      tcggcgtcg 273
                |||||||||
Sbjct: 25486901 tcggcgtcg 25486909

>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0523F01
          Length = 146419

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                        
Query: 205  ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccagaagaagtactta 264
            ||||||||||| ||||| |||||||| || || ||||| |||||||||||||||||||| 
Sbjct: 5158 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 5217

                     
Query: 265  tcggcgtcg 273
            |||||||||
Sbjct: 5218 tcggcgtcg 5226

>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0019I19
          Length = 164483

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 205    ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccagaagaagtactta 264
              ||||||||||| ||||| |||||||| || || ||||| |||||||||||||||||||| 
Sbjct: 160850 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 160909

                       
Query: 265    tcggcgtcg 273
              |||||||||
Sbjct: 160910 tcggcgtcg 160918

>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full
            insert sequence
          Length = 1388

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 205  ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccagaagaagtactta 264
            ||||||||||| ||||| |||||||| || || ||||| |||||||||||||||||||| 
Sbjct: 1153 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 1094

                     
Query: 265  tcggcgtcg 273
            |||||||||
Sbjct: 1093 tcggcgtcg 1085

>ref|XM_464400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1310

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 217  cggttgaccttctcagtggggtggaacgagtcccagaagaagtacttatcggcgtcgtcg 276
            ||||| |||||||| ||||||||||| | ||||||||||| ||||||   ||||||||||
Sbjct: 1114 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 1055

                                                     
Query: 277  caggtcagcggggacctgtcgttgcacatgtagcccatctc 317
            || ||||  || |||  ||||||||||||| | ||||||||
Sbjct: 1054 cacgtcaatggcgactcgtcgttgcacatgaaccccatctc 1014

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                           
Query: 217     cggttgaccttctcagtggggtggaacgagtcccagaagaagtacttatcggcgtcgtcg 276
               ||||| |||||||| ||||||||||| | ||||||||||| ||||||   ||||||||||
Sbjct: 4948187 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 4948128

                                                        
Query: 277     caggtcagcggggacctgtcgttgcacatgtagcccatctc 317
               || ||||  || |||  ||||||||||||| | ||||||||
Sbjct: 4948127 cacgtcaatggcgactcgtcgttgcacatgaaccccatctc 4948087

>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0031B09
          Length = 132729

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 217   cggttgaccttctcagtggggtggaacgagtcccagaagaagtacttatcggcgtcgtcg 276
             ||||| |||||||| ||||||||||| | ||||||||||| ||||||   ||||||||||
Sbjct: 19313 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 19254

                                                      
Query: 277   caggtcagcggggacctgtcgttgcacatgtagcccatctc 317
             || ||||  || |||  ||||||||||||| | ||||||||
Sbjct: 19253 cacgtcaatggcgactcgtcgttgcacatgaaccccatctc 19213

>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 217   cggttgaccttctcagtggggtggaacgagtcccagaagaagtacttatcggcgtcgtcg 276
             ||||| |||||||| ||||||||||| | ||||||||||| ||||||   ||||||||||
Sbjct: 92926 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 92867

                                                      
Query: 277   caggtcagcggggacctgtcgttgcacatgtagcccatctc 317
             || ||||  || |||  ||||||||||||| | ||||||||
Sbjct: 92866 cacgtcaatggcgactcgtcgttgcacatgaaccccatctc 92826

>dbj|AK060691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C02, full
            insert sequence
          Length = 1310

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 217  cggttgaccttctcagtggggtggaacgagtcccagaagaagtacttatcggcgtcgtcg 276
            ||||| |||||||| ||||||||||| | ||||||||||| ||||||   ||||||||||
Sbjct: 1114 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 1055

                                                     
Query: 277  caggtcagcggggacctgtcgttgcacatgtagcccatctc 317
            || ||||  || |||  ||||||||||||| | ||||||||
Sbjct: 1054 cacgtcaatggcgactcgtcgttgcacatgaaccccatctc 1014

>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 219    gttgaccttctcagtggggtggaacgagtcccagaaga 256
              ||||||| |||| ||||||||||| | |||||||||||
Sbjct: 117920 gttgaccctctccgtggggtggaaggcgtcccagaaga 117883

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 219      gttgaccttctcagtggggtggaacgagtcccagaaga 256
                ||||||| |||| ||||||||||| | |||||||||||
Sbjct: 20446175 gttgaccctctccgtggggtggaaggcgtcccagaaga 20446138



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 72       aatacatgctagtactatgt 91
                ||||||||||||||||||||
Sbjct: 20538084 aatacatgctagtactatgt 20538065



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 72       aatacatgctagtactatgt 91
                ||||||||||||||||||||
Sbjct: 20538026 aatacatgctagtactatgt 20538007

>dbj|AK100958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K23, full
            insert sequence
          Length = 1556

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 219  gttgaccttctcagtggggtggaacgagtcccagaaga 256
            ||||||| |||| ||||||||||| | |||||||||||
Sbjct: 1126 gttgaccctctccgtggggtggaaggcgtcccagaaga 1089

>ref|XM_473605.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 235  gggtggaacgagtcccagaagaagtactt 263
            |||||||||| ||||||||||| ||||||
Sbjct: 1013 gggtggaacgcgtcccagaagacgtactt 985

>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04,
              complete sequence
          Length = 164567

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 235    gggtggaacgagtcccagaagaagtactt 263
              |||||||||| ||||||||||| ||||||
Sbjct: 152380 gggtggaacgcgtcccagaagacgtactt 152352

>emb|AL663029.11| Mouse DNA sequence from clone RP23-355B12 on chromosome 11 Contains a
              novel gene, complete sequence
          Length = 170968

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    tgtagcccatctccaccttcc 325
              |||||||||||||||||||||
Sbjct: 132810 tgtagcccatctccaccttcc 132830

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 235      gggtggaacgagtcccagaagaagtactt 263
                |||||||||| ||||||||||| ||||||
Sbjct: 29085726 gggtggaacgcgtcccagaagacgtactt 29085698

>dbj|AK120597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148A09, full
            insert sequence
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 235  gggtggaacgagtcccagaagaagtactt 263
            |||||||||| ||||||||||| ||||||
Sbjct: 1190 gggtggaacgcgtcccagaagacgtactt 1162

>ref|NM_191210.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 235 gggtggaacgagtcccagaagaagtact 262
           |||||||||| ||||||||||| |||||
Sbjct: 992 gggtggaacgcgtcccagaagaggtact 965

>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    aatacatgctagtactatgt 91
             ||||||||||||||||||||
Sbjct: 81563 aatacatgctagtactatgt 81544



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    aatacatgctagtactatgt 91
             ||||||||||||||||||||
Sbjct: 81505 aatacatgctagtactatgt 81486

>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the
             3' end of a novel gene (FLJ22153) and the 3' end of the
             gene for a novel protein (ortholog of rat putative four
             repeat ion channel), complete sequence
          Length = 181311

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    atgctagtactatgtatcta 96
             ||||||||||||||||||||
Sbjct: 31783 atgctagtactatgtatcta 31802

>emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N18 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 122383

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tttcttacttgttacccaaa 34
             ||||||||||||||||||||
Sbjct: 16183 tttcttacttgttacccaaa 16202

>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ttaatctttcttacttgtta 28
              ||||||||||||||||||||
Sbjct: 129555 ttaatctttcttacttgtta 129574

>gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component system regulatory protein,
            partial cds; putative integral membrane protein and
            putative sodium:solute symporter, EthR (ethR), EthA
            (ethA), EthB (ethB), EthC (ethC), EthD (ethD), complete
            cds; class II transposon insertion sequence IS3
            transposase (tnpX) and transposase TnpA (tnpA) genes,
            complete cds; putative membrane protein gene, partial
            cds; and unknown genes
          Length = 23656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  gctcaagctcaccgccgtcg 199
            ||||||||||||||||||||
Sbjct: 2010 gctcaagctcaccgccgtcg 2029

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 235      gggtggaacgagtcccagaagaagtact 262
                |||||||||| ||||||||||| |||||
Sbjct: 31326225 gggtggaacgcgtcccagaagaggtact 31326198

>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 235   gggtggaacgagtcccagaagaagtact 262
             |||||||||| ||||||||||| |||||
Sbjct: 80508 gggtggaacgcgtcccagaagaggtact 80481

>gb|AF087149.1|HSTOP2B07 Homo sapiens DNA topoisomerase II beta (TOP2B) gene, exons 11 through
            15
          Length = 2910

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    ttaatctttcttacttgtta 28
            ||||||||||||||||||||
Sbjct: 1878 ttaatctttcttacttgtta 1859


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,197,179
Number of Sequences: 3902068
Number of extensions: 2197179
Number of successful extensions: 38558
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38441
Number of HSP's gapped (non-prelim): 117
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)