ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet65b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 32 0.56
2PPCK_CHLMU (Q9PLL6) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 28 4.8

>CYAA_YEAST (P08678) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
           (Adenylyl cyclase)
          Length = 2026

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 12  NNLSNQIILTSPARIRKAKQSITT*TSRHDMHHQAANKHIKA*RRTRARASGELHENMHD 191
           + LSN +    P+ +R+   S+   +S HD+++  A+K I      R +A  +    +H 
Sbjct: 215 STLSNHLADNVPSTLRRKVSSLVRGSSVHDINNGIADKQI------RPKAVAQSENTLHS 268

Query: 192 DTCMDGLFSHRRS 230
               +   SHR+S
Sbjct: 269 SDVPNSKRSHRKS 281



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>PPCK_CHLMU (Q9PLL6) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 599

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 217 LNNPSMHVSSCMFSCSSPDARARVLRYAFMC 125
           L NP +H  +C    SSPD  ARV ++ F+C
Sbjct: 55  LLNPELH-PNCFLVRSSPDDVARVEQFTFIC 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,261,519
Number of Sequences: 219361
Number of extensions: 622245
Number of successful extensions: 1448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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