ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet65b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full... 208 6e-51
2emb|AL808023.3| Mouse DNA sequence from clone RP23-32B6 on chrom... 42 0.85
3emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7... 42 0.85
4gb|DQ241799.1| Timema californicum mitochondrion, partial genome 42 0.85
5gb|U39382.1|HAU39382 Hexachaeta amabilis 16S ribosomal RNA gene,... 42 0.85
6emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chro... 42 0.85
7emb|AL645976.9| Mouse DNA sequence from clone RP23-442C5 on chro... 42 0.85
8ref|XM_468388.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.4
9gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, com... 40 3.4
10ref|XM_476410.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.4
11gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility c... 40 3.4
12gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, c... 40 3.4
13gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, comp... 40 3.4
14gb|AC126941.3| Mus musculus BAC clone RP23-133N24 from chromosom... 40 3.4
15gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequ... 40 3.4
16gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosom... 40 3.4
17gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, com... 40 3.4
18gb|BT025207.1| Drosophila melanogaster FI01106 full insert cDNA 40 3.4
19emb|CR974462.5| Mouse DNA sequence from clone RP23-222K15 on chr... 40 3.4
20emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 i... 40 3.4
21gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complet... 40 3.4
22gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complet... 40 3.4
23emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, ... 40 3.4
24ref|XM_761265.1| Theileria parva strain Muguga chromosome 1 hypo... 40 3.4
25gb|AC102635.8| Mus musculus chromosome 16, clone RP23-112K20, co... 40 3.4
26emb|AL928734.9| Mouse DNA sequence from clone RP23-409P4 on chro... 40 3.4
27emb|AL353732.14| Human DNA sequence from clone RP11-354P17 on ch... 40 3.4
28gb|AC163009.2| Mus musculus chromosome 1, clone RP23-268A12, com... 40 3.4
29gb|AC022296.34| Homo sapiens 3 BAC RP11-91K8 (Roswell Park Cance... 40 3.4
30gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome ... 40 3.4
31gb|AC165272.2| Mus musculus BAC clone RP24-296O4 from chromosome... 40 3.4
32emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4,... 40 3.4
33emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, co... 40 3.4
34gb|AC091038.9| Homo sapiens chromosome 18, clone RP11-1015N5, co... 40 3.4
35emb|CR932808.1| Mus musculus chromosome 2, clone RPCI-21-370D12 ... 40 3.4
36emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 s... 40 3.4
37gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, co... 40 3.4
38gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete seq... 40 3.4
39gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, com... 40 3.4
40gb|DQ397635.1| Cenarchaeum symbiosum clone C05H05, complete sequ... 40 3.4
41gb|AY037518.1| Tephritis acutungula 16S ribosomal RNA gene, part... 40 3.4
42gb|AC100848.2| Homo sapiens chromosome 18, clone RP11-909B2, com... 40 3.4
43gb|AF434766.1| Mus musculus fatty acid translocase (Cd36) gene, ... 40 3.4
44ref|NM_079187.4| Drosophila melanogaster scratch CG1130-RA (scrt... 40 3.4
45gb|AC115811.12| Mus musculus chromosome 5, clone RP23-429M21, co... 40 3.4
46gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 1... 40 3.4
47gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswel... 40 3.4
48gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome... 40 3.4
49gb|AC153935.2| Mus musculus 10 BAC RP24-273A2 (Roswell Park Canc... 40 3.4
50dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
51dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
53gb|AC051619.7|AC051619 Homo sapiens chromosome 15 clone CTD-2651... 40 3.4
54gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, co... 40 3.4
55gb|AC154124.5| Mus musculus chromosome 5, clone RP24-63G13, comp... 40 3.4
56gb|AC133084.4| Mus musculus BAC clone RP24-358F13 from chromosom... 40 3.4
57dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
58dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
59dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
60dbj|AK105098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
61dbj|AK102246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
62dbj|AK064720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
63emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in... 40 3.4
64gb|AC084382.2| Mus musculus BAC clone RP23-5K17 from 15, complet... 40 3.4
65emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 3.4
66gb|AF145627.1|AF145627 Drosophila melanogaster clone GH05150 scr... 40 3.4
67gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13... 40 3.4
68gb|AC110572.13| Mus musculus chromosome 5, clone RP23-316P20, co... 40 3.4
69gb|AF100956.1|AF100956 Mus musculus major histocompatibility loc... 40 3.4
70emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in... 40 3.4
71gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complet... 40 3.4
72emb|CR974451.9| Mouse DNA sequence from clone RP24-180B11 on chr... 40 3.4
73gb|U36477.1|DMU36477 Drosophila melanogaster neuron specific zin... 40 3.4
74gb|AC153936.3| Mus musculus 10 BAC RP24-114G19 (Roswell Park Can... 40 3.4
75gb|AC165139.11| Mus musculus chromosome 5, clone RP23-424H17, co... 40 3.4
76emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chr... 40 3.4
77emb|AL606906.18| Mouse DNA sequence from clone RP23-121J14 on ch... 40 3.4 
>gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full insert mRNA
            sequence
          Length = 1874

 Score =  208 bits (105), Expect = 6e-51
 Identities = 176/196 (89%), Gaps = 9/196 (4%)
 Strand = Plus / Minus

                                                                        
Query: 4    ctttcactaataacttatcaaatcaaattattcttacatcaccagcgaggataagaaaag 63
            |||||||||||||||  |||| |||||||||||||||||||||| ||| |||||||||||
Sbjct: 1852 ctttcactaataactcctcaa-tcaaattattcttacatcaccaacgaagataagaaaag 1794

                                                                        
Query: 64   caa----agca--aagcatcactacgtagac--gagccggcatgacatgcatcatcaagc 115
            |||    ||||  ||||||||||||||| |   ||| ||||||| ||||||||||||| |
Sbjct: 1793 caagcaaagcattaagcatcactacgtatatatgagacggcatggcatgcatcatcaaac 1734

                                                                        
Query: 116  ggcaaacaaacacataaaggcatagcggaggacacgcgcgcgcgcatccggggaactgca 175
            ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1733 ggcaagcaaacacataaaggcatagcggaggacacgcgcgcgcgcatccgggaaactgca 1674

                            
Query: 176  tgaaaacatgcacgac 191
            ||||||||||||||||
Sbjct: 1673 tgaaaacatgcacgac 1658
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>emb|AL808023.3| Mouse DNA sequence from clone RP23-32B6 on chromosome 11 Contains the
             3' end of the Ube2g1 gene for ubiquitin-conjugating enzyme
             E2G 1 (UBC7 homolog, C. elegans), the 5' end of the Ankfy1
             gene for ankyrin repeat and FYVE domain containing 1 and a
             CpG island, complete sequence
          Length = 95661

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    taagaaaagcaaagcaaagca 75
             |||||||||||||||||||||
Sbjct: 64375 taagaaaagcaaagcaaagca 64355
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>emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7, COMPLETE SEQUENCE
          Length = 115553

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     tatcaaatcaaattattctta 39
              |||||||||||||||||||||
Sbjct: 108401 tatcaaatcaaattattctta 108421
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>gb|DQ241799.1| Timema californicum mitochondrion, partial genome
          Length = 14387

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 11    taataacttatcaaatcaaattatt 35
             |||||| ||||||||||||||||||
Sbjct: 13454 taataaattatcaaatcaaattatt 13478
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>gb|U39382.1|HAU39382 Hexachaeta amabilis 16S ribosomal RNA gene, mitochondrial gene
           encoding mitochondrial RNA, partial sequence
          Length = 870

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  aacttatcaaatcaaattatt 35
           |||||||||||||||||||||
Sbjct: 312 aacttatcaaatcaaattatt 292
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>emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chromosome 2, complete
             sequence
          Length = 257463

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    ataagaaaagcaaagcaaagc 74
             |||||||||||||||||||||
Sbjct: 74386 ataagaaaagcaaagcaaagc 74406
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>emb|AL645976.9| Mouse DNA sequence from clone RP23-442C5 on chromosome 11, complete
             sequence
          Length = 124281

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    gataagaaaagcaaagcaaag 73
             |||||||||||||||||||||
Sbjct: 91331 gataagaaaagcaaagcaaag 91351
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>ref|XM_468388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3102

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  aagaaaagcaaagcaaagca 75
           ||||||||||||||||||||
Sbjct: 129 aagaaaagcaaagcaaagca 110
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>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence
          Length = 190857

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaaagcaaagcaaagcatca 78
             ||||||||||||||||||||
Sbjct: 23083 aaaagcaaagcaaagcatca 23102
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>ref|XM_476410.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3390

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gataagaaaagcaaagcaaa 72
           ||||||||||||||||||||
Sbjct: 738 gataagaaaagcaaagcaaa 757
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>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28,
              NADH oxidoreductase, NG29, KIFC1, Fas-binding protein,
              BING1, tapasin, RalGDS-like, KE2, BING4, beta
              1,3-galactosyl transferase, and RPS18 genes, complete cds;
              Sacm21 gene, partial cds; and unknown gene
          Length = 213245

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 209386 aagaaaagcaaagcaaagca 209367
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>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence
          Length = 172747

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 114360 aagaaaagcaaagcaaagca 114379
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>gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, complete sequence
          Length = 130269

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 24923 aagaaaagcaaagcaaagca 24942
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>gb|AC126941.3| Mus musculus BAC clone RP23-133N24 from chromosome 7, complete sequence
          Length = 196621

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 51643 aagaaaagcaaagcaaagca 51624
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>gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequence
          Length = 197836

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 123433 aagaaaagcaaagcaaagca 123414
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>gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosome 14, complete
             sequence
          Length = 226292

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 32352 aagaaaagcaaagcaaagca 32371
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>gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, complete sequence
          Length = 175976

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 107538 aagaaaagcaaagcaaagca 107557
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>gb|BT025207.1| Drosophila melanogaster FI01106 full insert cDNA
          Length = 3639

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  aagaaaagcaaagcaaagca 75
           ||||||||||||||||||||
Sbjct: 558 aagaaaagcaaagcaaagca 577
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>emb|CR974462.5| Mouse DNA sequence from clone RP23-222K15 on chromosome 17, complete
             sequence
          Length = 228057

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 53795 aagaaaagcaaagcaaagca 53776
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>emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 in linkage group 3,
              complete sequence
          Length = 200759

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 148461 aagaaaagcaaagcaaagca 148480
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>gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complete sequence
          Length = 212177

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 82082 aagaaaagcaaagcaaagca 82063
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>gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complete sequence
          Length = 195311

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 182639 aagaaaagcaaagcaaagca 182620
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>emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, complete sequence
          Length = 160551

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 47719 aagaaaagcaaagcaaagca 47738
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>ref|XM_761265.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0837) partial mRNA
          Length = 3237

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  aaacaaacacataaaggcat 138
            ||||||||||||||||||||
Sbjct: 1056 aaacaaacacataaaggcat 1075
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>gb|AC102635.8| Mus musculus chromosome 16, clone RP23-112K20, complete sequence
          Length = 204382

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 144244 aagaaaagcaaagcaaagca 144263
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>emb|AL928734.9| Mouse DNA sequence from clone RP23-409P4 on chromosome 2, complete
             sequence
          Length = 113197

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 34052 aagaaaagcaaagcaaagca 34033
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>emb|AL353732.14| Human DNA sequence from clone RP11-354P17 on chromosome 9 Contains the
             IFNA6 gene for interferon, alpha 6, the IFNA13 gene for
             interferon, alpha 13, the IFNA2 gene for interferon, alpha
             2, the IFNA8 gene for interferon, alpha 8, an interferon,
             omega 1 (IFNW1) pseudogene, the IFNA1 gene for interferon,
             alpha 1, 4 interferon pseudogenes, the 3' end of a novel
             gene and a CpG island, complete sequence
          Length = 173211

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    agaaaagcaaagcaaagcat 76
             ||||||||||||||||||||
Sbjct: 36804 agaaaagcaaagcaaagcat 36823
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>gb|AC163009.2| Mus musculus chromosome 1, clone RP23-268A12, complete sequence
          Length = 147135

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 119696 aagaaaagcaaagcaaagca 119677
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>gb|AC022296.34| Homo sapiens 3 BAC RP11-91K8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153650

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aggataagaaaagcaaagca 70
             ||||||||||||||||||||
Sbjct: 92573 aggataagaaaagcaaagca 92554
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>gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome 1, complete sequence
          Length = 200598

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ggataagaaaagcaaagcaa 71
             ||||||||||||||||||||
Sbjct: 87205 ggataagaaaagcaaagcaa 87186
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>gb|AC165272.2| Mus musculus BAC clone RP24-296O4 from chromosome 14, complete sequence
          Length = 178348

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 65312 aagaaaagcaaagcaaagca 65293
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>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19,
             complete sequence
          Length = 188317

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 78562 aagaaaagcaaagcaaagca 78581
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>emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, complete sequence
          Length = 223724

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 214912 aagaaaagcaaagcaaagca 214931
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>gb|AC091038.9| Homo sapiens chromosome 18, clone RP11-1015N5, complete sequence
          Length = 202421

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 68870 aagaaaagcaaagcaaagca 68889
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>emb|CR932808.1| Mus musculus chromosome 2, clone RPCI-21-370D12 strain 129/Sv, complete
             sequence
          Length = 163435

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 25362 aagaaaagcaaagcaaagca 25343
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>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete
              sequence
          Length = 165525

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 108041 aagaaaagcaaagcaaagca 108022
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>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence
          Length = 171770

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 149033 aagaaaagcaaagcaaagca 149052
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>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence
          Length = 129695

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    ataagaaaagcaaagcaaagcatc 77
             |||||||||||||| |||||||||
Sbjct: 70776 ataagaaaagcaaaccaaagcatc 70753
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>gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, complete sequence
          Length = 46741

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 38217 aagaaaagcaaagcaaagca 38236
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>gb|DQ397635.1| Cenarchaeum symbiosum clone C05H05, complete sequence
          Length = 43064

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    cgagccggcatgacatgcat 107
             ||||||||||||||||||||
Sbjct: 18023 cgagccggcatgacatgcat 18042
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>gb|AY037518.1| Tephritis acutungula 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 478

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 15  aacttatcaaatcaaattattcttacat 42
           |||||||||||| |||||||| ||||||
Sbjct: 320 aacttatcaaataaaattatttttacat 293
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>gb|AC100848.2| Homo sapiens chromosome 18, clone RP11-909B2, complete sequence
          Length = 209251

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 55356 aagaaaagcaaagcaaagca 55375
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>gb|AF434766.1| Mus musculus fatty acid translocase (Cd36) gene, upstream promoter
            region and 5' UTR
          Length = 9466

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   aagaaaagcaaagcaaagca 75
            ||||||||||||||||||||
Sbjct: 3328 aagaaaagcaaagcaaagca 3309
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>ref|NM_079187.4| Drosophila melanogaster scratch CG1130-RA (scrt), mRNA
          Length = 3641

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  aagaaaagcaaagcaaagca 75
           ||||||||||||||||||||
Sbjct: 558 aagaaaagcaaagcaaagca 577
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>gb|AC115811.12| Mus musculus chromosome 5, clone RP23-429M21, complete sequence
          Length = 180812

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 78187 aagaaaagcaaagcaaagca 78206
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>gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 15q21.3, complete
             sequence
          Length = 192464

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 61559 aagaaaagcaaagcaaagca 61578
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>gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 71864 aagaaaagcaaagcaaagca 71883
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>gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome 7, complete sequence
          Length = 194576

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 156285 aagaaaagcaaagcaaagca 156304
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>gb|AC153935.2| Mus musculus 10 BAC RP24-273A2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 169237

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 154943 aagaaaagcaaagcaaagca 154962
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 56       aagaaaagcaaagcaaagca 75
                ||||||||||||||||||||
Sbjct: 18986638 aagaaaagcaaagcaaagca 18986657
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gataagaaaagcaaagcaaa 72
              ||||||||||||||||||||
Sbjct: 760092 gataagaaaagcaaagcaaa 760073
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 56       aagaaaagcaaagcaaagca 75
                ||||||||||||||||||||
Sbjct: 34970376 aagaaaagcaaagcaaagca 34970395
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>gb|AC051619.7|AC051619 Homo sapiens chromosome 15 clone CTD-2651B20 map 15q21.1, complete
              sequence
          Length = 213999

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 132071 aagaaaagcaaagcaaagca 132090
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>gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, complete sequence
          Length = 183749

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 182895 aagaaaagcaaagcaaagca 182914
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>gb|AC154124.5| Mus musculus chromosome 5, clone RP24-63G13, complete sequence
          Length = 199573

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 91718 aagaaaagcaaagcaaagca 91699
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>gb|AC133084.4| Mus musculus BAC clone RP24-358F13 from chromosome 5, complete sequence
          Length = 177485

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 117686 aagaaaagcaaagcaaagca 117667
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>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_G09
          Length = 115815

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gataagaaaagcaaagcaaa 72
             ||||||||||||||||||||
Sbjct: 98623 gataagaaaagcaaagcaaa 98604
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>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1513_F02
          Length = 126845

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gataagaaaagcaaagcaaa 72
             ||||||||||||||||||||
Sbjct: 79899 gataagaaaagcaaagcaaa 79880
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643F09
          Length = 161001

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 30717 aagaaaagcaaagcaaagca 30736
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>dbj|AK105098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C04, full
           insert sequence
          Length = 3390

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gataagaaaagcaaagcaaa 72
           ||||||||||||||||||||
Sbjct: 738 gataagaaaagcaaagcaaa 757
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>dbj|AK102246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F01, full
           insert sequence
          Length = 3102

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  aagaaaagcaaagcaaagca 75
           ||||||||||||||||||||
Sbjct: 128 aagaaaagcaaagcaaagca 109
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>dbj|AK064720.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E10,
          full insert sequence
          Length = 754

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 aagaaaagcaaagcaaagca 75
          ||||||||||||||||||||
Sbjct: 1  aagaaaagcaaagcaaagca 20
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>emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in linkage group 21,
              complete sequence
          Length = 206304

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 130444 aagaaaagcaaagcaaagca 130425
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>gb|AC084382.2| Mus musculus BAC clone RP23-5K17 from 15, complete sequence
          Length = 164883

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aataacttatcaaatcaaat 31
             ||||||||||||||||||||
Sbjct: 85699 aataacttatcaaatcaaat 85680
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     aatcaaattattcttacatc 43
              ||||||||||||||||||||
Sbjct: 610941 aatcaaattattcttacatc 610922
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>gb|AF145627.1|AF145627 Drosophila melanogaster clone GH05150 scratch (scrt) mRNA, complete
           cds
          Length = 3639

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  aagaaaagcaaagcaaagca 75
           ||||||||||||||||||||
Sbjct: 558 aagaaaagcaaagcaaagca 577
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>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete
              sequence
          Length = 309958

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 298493 aagaaaagcaaagcaaagca 298512
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>gb|AC110572.13| Mus musculus chromosome 5, clone RP23-316P20, complete sequence
          Length = 170850

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aaaagcaaagcaaagcatca 78
             ||||||||||||||||||||
Sbjct: 11606 aaaagcaaagcaaagcatca 11587
to top
>gb|AF100956.1|AF100956 Mus musculus major histocompatibility locus class II region;
             Fas-binding protein Daxx (DAXX) gene, partial cds; Bing1
             (BING1), tapasin (tapasin), RalGDS-like factor (RLF), KE2
             (KE2), BING4 (BING4), beta1, 3-galactosyl transferase
             (beta1,3-galactosyl transferase), ribosomal protein
             subunit S18 (RPS18), Sacm21 (Sacm21), H2K1(b) (H2-K1(b)),
             RING1 (RING1), KE6a (KE6a), KE4 (KE4), RXRbeta (RXRbeta),
             collagen alpha-2 (XI) (COLA11A2), H2-O alpha (H2-Oalpha),
             RING3 (RING3), H2-M alpha (H2-M alpha), H2-M beta 2 (H2-M
             beta2), and H2-M beta1 (H2-M beta1) genes, complete cds;
             and LMP 2 gene, partial cds
          Length = 273800

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 47101 aagaaaagcaaagcaaagca 47082
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>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20,
              complete sequence
          Length = 213980

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 157311 aagaaaagcaaagcaaagca 157330
to top
>gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complete sequence
          Length = 200104

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ggataagaaaagcaaagcaa 71
             ||||||||||||||||||||
Sbjct: 42206 ggataagaaaagcaaagcaa 42187
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>emb|CR974451.9| Mouse DNA sequence from clone RP24-180B11 on chromosome 17, complete
              sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 159853 aagaaaagcaaagcaaagca 159834
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>gb|U36477.1|DMU36477 Drosophila melanogaster neuron specific zinc finger transcription
          factor (scratch) mRNA, complete cds
          Length = 3084

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 aagaaaagcaaagcaaagca 75
          ||||||||||||||||||||
Sbjct: 17 aagaaaagcaaagcaaagca 36
to top
>gb|AC153936.3| Mus musculus 10 BAC RP24-114G19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 170723

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 95020 aagaaaagcaaagcaaagca 95039
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>gb|AC165139.11| Mus musculus chromosome 5, clone RP23-424H17, complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 101537 aagaaaagcaaagcaaagca 101556
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>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete
             sequence
          Length = 180252

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aagaaaagcaaagcaaagca 75
             ||||||||||||||||||||
Sbjct: 96573 aagaaaagcaaagcaaagca 96592
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>emb|AL606906.18| Mouse DNA sequence from clone RP23-121J14 on chromosome 4, complete
              sequence
          Length = 198772

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagaaaagcaaagcaaagca 75
              ||||||||||||||||||||
Sbjct: 184895 aagaaaagcaaagcaaagca 184876


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,465,430
Number of Sequences: 3902068
Number of extensions: 2465430
Number of successful extensions: 67606
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67237
Number of HSP's gapped (non-prelim): 365
length of query: 259
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 237
effective length of database: 17,147,199,772
effective search space: 4063886345964
effective search space used: 4063886345964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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