| Clone Name | rbaet64h09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in linkage group 12, complete sequence Length = 138570 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 cactaaaaataatttacagtttgatt 26 ||||||||||| |||||||||||||| Sbjct: 65066 cactaaaaatagtttacagtttgatt 65091
>gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, complete sequence Length = 201984 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 taaaaataatttacagtttga 24 ||||||||||||||||||||| Sbjct: 127517 taaaaataatttacagtttga 127537
>gb|AC120398.10| Mus musculus chromosome 3, clone RP24-333H9, complete sequence Length = 153725 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ctaaaaataatttacagtttg 23 ||||||||||||||||||||| Sbjct: 109131 ctaaaaataatttacagtttg 109151
>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence Length = 187545 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 taaaaataatttacagtttga 24 ||||||||||||||||||||| Sbjct: 151558 taaaaataatttacagtttga 151538
>gb|AC141435.28| Medicago truncatula clone mth2-21i11, complete sequence Length = 132497 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tttttgtcaagttttcgtgcc 107 ||||||||||||||||||||| Sbjct: 24498 tttttgtcaagttttcgtgcc 24478
>dbj|AK080016.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530047H08 product:unclassifiable, full insert sequence Length = 1627 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ctaaaaataatttacagtttg 23 ||||||||||||||||||||| Sbjct: 1423 ctaaaaataatttacagtttg 1443
>gb|AC074088.5| Homo sapiens BAC clone RP11-122B24 from 4, complete sequence Length = 69463 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aaaaataatttacagtttgat 25 ||||||||||||||||||||| Sbjct: 62375 aaaaataatttacagtttgat 62395
>gb|AC002983.1| Arabidopsis thaliana BAC T3F12 from chromosome IV near 24 cM, complete sequence Length = 107183 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 31892 cgacaacaacaactctgcgc 31873
>ref|XM_748860.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu5g06800) partial mRNA Length = 1821 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gcctgccgctgcaccgagga 303 |||||||||||||||||||| Sbjct: 1637 gcctgccgctgcaccgagga 1618
>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence Length = 195511 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 aaaataatttacagtttgattcat 29 ||||||||||| |||||||||||| Sbjct: 79005 aaaataatttagagtttgattcat 78982
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttgattcatctttcactcc 39 |||||||||||||||||||| Sbjct: 885819 tttgattcatctttcactcc 885838
>emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 24 Length = 199362 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 115288 cgacaacaacaactctgcgc 115307
>gb|AC007288.13| Arabidopsis thaliana chromosome 2 clone F10C8 map PR1, complete sequence Length = 58690 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 17837 cgacaacaacaactctgcgc 17818
>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete sequence Length = 103495 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 72264 cgacaacaacaactctgcgc 72283
>gb|AC006217.4| Arabidopsis thaliana chromosome 2 clone T13E11 map mi310, complete sequence Length = 95959 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 56746 cgacaacaacaactctgcgc 56727
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ttcgtccccattatttgccg 171 |||||||||||||||||||| Sbjct: 297857 ttcgtccccattatttgccg 297838
>emb|BX005323.10| Zebrafish DNA sequence from clone DKEY-11F12 in linkage group 7, complete sequence Length = 219799 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atttacagtttgattcatct 31 |||||||||||||||||||| Sbjct: 205970 atttacagtttgattcatct 205989
>dbj|AP000389.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MSJ3 Length = 55739 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 55098 cgacaacaacaactctgcgc 55117
>dbj|AB024037.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSK10 Length = 81414 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 28948 cgacaacaacaactctgcgc 28967
>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence Length = 153337 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 atctctactagtacctcaca 140 |||||||||||||||||||| Sbjct: 143422 atctctactagtacctcaca 143403
>emb|BX005310.6| Zebrafish DNA sequence from clone CH211-214J2 in linkage group 7, complete sequence Length = 221979 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atttacagtttgattcatct 31 |||||||||||||||||||| Sbjct: 140956 atttacagtttgattcatct 140975
>gb|AF058825.1|AF058825 Arabidopsis thaliana BAC F7N22 Length = 110157 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cgacaacaacaactctgcgc 191 |||||||||||||||||||| Sbjct: 91760 cgacaacaacaactctgcgc 91741 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,137,519 Number of Sequences: 3902068 Number of extensions: 3137519 Number of successful extensions: 49460 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49419 Number of HSP's gapped (non-prelim): 41 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)