ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet64g10 |
|---|---|
| Clone Library Name | barley_pub |
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 254 NNAWAFATNFVPG 266
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 254 NNAWAFATNFVPG 266
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 254 NNAWAFATNFVPG 266
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 254 NNAWAFATNFVPG 266
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 254 NNAWAFATNFVPG 266
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 252 NNAWAFATNFVPG 264
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 252 NNAWAFATNFVPG 264
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 252 NNAWAFATNFVPG 264
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 252 NNAWAFATNFVPG 264
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 252 NNAWAFATNFVPG 264
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 251 NNAWAFATNFVPG 263
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 251 NNAWAFATNFVPG 263
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 251 NNAWAFATNFVPG 263
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 111 NNAWAFATNFVPG 123
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 253 NNAWAFATNFVPG 265
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 253 NNAWAFATNFVPG 265
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.43 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWAFATNF PG Sbjct: 253 NNAWAFATNFVPG 265
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 31.2 bits (69), Expect = 0.74 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -1 Query: 253 NNAWAFATNFAPGS 212 NNAW FAT FAPGS Sbjct: 255 NNAWVFATKFAPGS 268
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 31.2 bits (69), Expect = 0.74 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 253 NNAWAFATNFAPGS 212 NNAWA+ATNF PG+ Sbjct: 249 NNAWAYATNFVPGN 262
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 248 NNAWAYATNFVPG 260
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 193 NNAWAYATNFVPG 205
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 224 NNAWAYATNFVPG 236
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 254 NNAWAYATNFVPG 266
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 254 NNAWAYATNFVPG 266
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 254 NNAWAYATNFVPG 266
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFTPG 264
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 252 NNAWAYATNFVPG 264
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 251 NNAWAYATNFVPG 263
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 261 NNAWAYATNFVPG 273
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 232 NNAWAYATNFVPG 244
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 242 NNAWAYATNFVPG 254
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 250 NNAWAYATNFVPG 262
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 250 NNAWAYATNFVPG 262
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 253 NNAWAYATNFVPG 265
>SYFA_TROW8 (Q83HH3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 336 Score = 30.8 bits (68), Expect = 0.96 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +2 Query: 2 THNPSIHSLVHTLCSINLHCAQLGRG---HLARSMMMIQINTQSTCSYTLIHDVQVHMHI 172 TH P H L +C N+ L +G LAR + ++N + C+Y + I Sbjct: 208 THTPVFHQLEGLVCDRNITLGHL-KGTVEDLARYLFGAEVNLRMRCNYFPFTEPSAEFDI 266 Query: 173 SSDG 184 S DG Sbjct: 267 SRDG 270
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 265 NNAWAYATNFVPG 277
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 265 NNAWAYATNFVPG 277
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 30.8 bits (68), Expect = 0.96 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAWA+ATNF PG Sbjct: 137 NNAWAYATNFVPG 149
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 103 NNAWSYATNFVPG 115
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 29.6 bits (65), Expect = 2.1 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW FATNF PG Sbjct: 254 NNAWNFATNFVPG 266
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 255 NNAWSYATNFVPG 267
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 254 NNAWSYATNFVPG 266
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 254 NNAWSYATNFVPG 266
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 254 NNAWSYATNFVPG 266
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 253 NNAWSYATNFVPG 265
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 253 NNAWSYATNFVPG 265
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 256 NNAWSYATNFVPG 268
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 29.6 bits (65), Expect = 2.1 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW++ATNF PG Sbjct: 215 NNAWSYATNFVPG 227
>UVRA_CHLTR (O84337) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1786 Score = 28.9 bits (63), Expect = 3.7 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +2 Query: 11 PSIHSLVHTLCSINLHCAQLGRGHLARSMMMIQINTQSTCSYTLIHDVQVHMHISSDGQT 190 PSIH + TLC++ L LGR + S IQ + +Y L+ V+ D T Sbjct: 780 PSIHQKIETLCTLGLQYLPLGRPLYSLSGGEIQ---RLKLAYELLAPVKHPTLYVLDEPT 836 Query: 191 DGC*TH 208 G TH Sbjct: 837 TGLHTH 842
>PYRB_BIFLO (Q8G655) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 326 Score = 28.9 bits (63), Expect = 3.7 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +2 Query: 2 THNPSIHSLVHTLCSI-NLHCAQLGRGHLARSMMMI-QINTQSTCSYTLIHDV 154 T ++HSL+ TLC N+ + L +I +IN +CSY + D+ Sbjct: 167 TFGRTVHSLIETLCRFGNVRFVLISPDELKTPQYVIDRINATDSCSYVEVRDL 219
>UVRA_CHLPN (Q9Z985) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1826 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 8 NPSIHSLVHTLCSINLHCAQLGR 76 +P IH +H LCS+ L LGR Sbjct: 781 HPKIHEKIHALCSLRLDYLPLGR 803
>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) Length = 2171 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 104 IQINTQSTCSYTLIHDVQV-HMHISSDGQTDG 196 + T+STC T++H+ Q+ H +IS G G Sbjct: 20 LSAETESTCKGTVVHEAQLNHFYISPGGSNYG 51
>SYFA_TROWT (Q83GS9) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 336 Score = 28.1 bits (61), Expect = 6.2 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +2 Query: 2 THNPSIHSLVHTLCSINLHCAQLGRG---HLARSMMMIQINTQSTCSYTLIHDVQVHMHI 172 TH P H L +C N+ L +G LA + ++N + C+Y + I Sbjct: 208 THTPVFHQLEGLVCDRNITLGHL-KGTVEDLAGYLFGAEVNLRMRCNYFPFTEPSAEFDI 266 Query: 173 SSDG 184 S DG Sbjct: 267 SRDG 270
>RECN_XYLFT (Q87BS5) DNA repair protein recN (Recombination protein N)| Length = 557 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +2 Query: 17 IHSLVHTLCSINLHCAQLGRGHLARSMMMIQINTQSTCSYTLIHDVQV 160 +H+ HTL +N H A+LG MIQ++ T + +D+ + Sbjct: 245 LHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNI 292
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 27.7 bits (60), Expect = 8.2 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -1 Query: 253 NNAWAFATNFAPG 215 NNAW ATNF PG Sbjct: 253 NNAWLIATNFVPG 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,960,312 Number of Sequences: 219361 Number of extensions: 673735 Number of successful extensions: 2095 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 2071 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2092 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
