>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein|
            (350/400 kDa PCAF-associated factor) (PAF350/400)
            (STAF40) (Tra1 homolog)
          Length = 3859

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -2

Query: 250  WD*LDDYTARDGFLPPPRACYVIQCARTHPSSIANWRFVQHFLVLSKLSCPKLLLYNV 77
            W+ L +Y    G + P     V++CA      ++NW  ++  LV  ++SCPK + + V
Sbjct: 2834 WEALTEYGQSKGHINP---YLVLECAWR----VSNWTAMKEALVQVEVSCPKEMAWKV 2884

>Y588_ARCFU (O29667) Hypothetical protein AF0588|
          Length = 481

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 172 RTHPSSIANWRFVQHFLVLSKLSCPKL 92
           R HP+ +A WR V+H+  L + + PK+
Sbjct: 331 RAHPNMLAGWRQVKHYWELLEKADPKM 357

>TRRAP_MOUSE (Q80YV3) Transformation/transcription domain-associated protein (Tra1|
            homolog)
          Length = 2565

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -2

Query: 250  WD*LDDYTARDGFLPPPRACYVIQCARTHPSSIANWRFVQHFLVLSKLSCPKLLLYNV 77
            W+ L ++    G + P     V++CA      ++NW  ++  LV  ++SCPK + + V
Sbjct: 1533 WEALTEFGQSKGHINP---YLVLECAWR----VSNWTAMKEALVQVEVSCPKEMAWKV 1583

>T2R38_MOUSE (Q7TQA6) Putative taste receptor type 2 member 38 (T2R38) (mT2r31)|
          Length = 331

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = -2

Query: 187 VIQCARTHPSSIANW---RFVQHFLVLSKLS--CPKLLLYNVLLRFFSSSFKMYH 38
           +++ + T P  +A+W   RF+Q  LV+  LS  C  L L++   R  S+   + H
Sbjct: 121 IVRFSHTFPLHVASWVSRRFLQMLLVVLLLSCICTALCLWDFFCRSHSTVTSLLH 175

>KS6AB_XENLA (P10666) Ribosomal protein S6 kinase 2 beta (EC 2.7.11.1)|
           (Ribosomal protein S6 kinase II beta) (S6KII-beta)
           (P90-RSK)
          Length = 629

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 245 LTRRLHRQRWFSTSTACMLCYTVCAHASIVYRQ 147
           L  R+ RQ++FS   AC + +TVC     ++ Q
Sbjct: 495 LLDRILRQKFFSEREACSVLFTVCKTVEYLHSQ 527

>VG1_SPV4 (P11333) Capsid protein (VP1)|
          Length = 553

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 169 THPSSIANWRFVQHFLVLSKLS 104
           +HP S+  W F  H+  L KLS
Sbjct: 481 SHPQSLDYWHFADHYAQLPKLS 502


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,896,812
Number of Sequences: 219361
Number of extensions: 772376
Number of successful extensions: 1709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)