ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet64e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 101 1e-18
2emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine di... 101 1e-18
3emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diph... 101 1e-18
4ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-12
5ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group... 82 1e-12
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
7dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
8dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
9dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
10dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
11gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110)... 82 1e-12
12gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5)... 82 1e-12
13dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein... 82 1e-12
14dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein... 82 1e-12
15gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promote... 74 3e-10
16gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, com... 50 0.005
17dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, c... 50 0.005
18dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, c... 50 0.005
19gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 50 0.005
20gb|AC007043.3|AC007043 Homo sapiens BAC clone RP11-507E21 from Y... 50 0.005
21gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromoso... 46 0.075
22dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.29
23emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in... 44 0.29
24emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 i... 44 0.29
25gb|AC152925.1| Tribolium castaneum BAC T.cast_C17P12 (Clemson U... 42 1.2
26gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome... 42 1.2
27gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete... 42 1.2
28gb|AF248696.1|AF248696 Gryllus veletis isolate Gveleti2 16S larg... 42 1.2
29gb|AF248695.1|AF248695 Gryllus veletis isolate Gveleti1 16S larg... 42 1.2
30gb|AF248685.1|AF248685 Gryllus bimaculatus 16S large subunit rib... 42 1.2
31gb|AF212059.1|AF212059 Gryllus fultoni 16S ribosomal RNA gene, p... 42 1.2
32gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complet... 42 1.2
33gb|AC157569.12| Mus musculus chromosome 3, clone RP23-434M21, co... 40 4.6
34gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, compl... 40 4.6
35gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, comple... 40 4.6
36gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 4.6
37gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome... 40 4.6
38gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, com... 40 4.6
39gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosom... 40 4.6
40gb|AC092536.3| Homo sapiens BAC clone RP11-32N3 from 7, complete... 40 4.6
41emb|AL603834.6| Mouse DNA sequence from clone RP23-113D4 on chro... 40 4.6
42emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 i... 40 4.6
43emb|BX663518.10| Zebrafish DNA sequence from clone CH211-214O7 i... 40 4.6
44gb|AC156560.2| Mus musculus BAC clone RP24-358N14 from chromosom... 40 4.6
45gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8... 40 4.6
46gb|AC114763.6| Homo sapiens BAC clone RP11-369K2 from 2, complet... 40 4.6
47gb|AC115612.2| Dictyostelium discoideum chromosome 2 map 6245135... 40 4.6
48gb|AF180355.1|AF180355 Brassica oleracea isolate B265 ABI1 prote... 40 4.6
49gb|AC121504.14| Mus musculus chromosome 13, clone RP24-140A15, c... 40 4.6
50gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complet... 40 4.6 
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 293 agccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 667 agccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaa 613
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>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose
           pyrophosphatase
          Length = 642

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 293 agccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 640 agccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaa 586
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>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose
           pyrophosphatase (sagppase gene)
          Length = 639

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 293 agccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 637 agccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaa 583
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>ref|XM_482788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 938

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 687
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>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA
          Length = 994

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 676
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                     
Query: 295      ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
                ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 22551117
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>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690E03
          Length = 139924

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                  
Query: 295   ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
             ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 24618
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>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0493A04
          Length = 149367

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                   
Query: 295    ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
              ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 146045
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>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full
           insert sequence
          Length = 938

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 687
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>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full
           insert sequence
          Length = 994

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 676
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>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds
          Length = 1004

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 668
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>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds
          Length = 1030

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 689
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>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds
          Length = 642

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 586
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>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds
          Length = 994

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 295 ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
           ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaa 688
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>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and
            complete cds
          Length = 2490

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 295  ccgctgccgccgagcacggacttgagcttcttgacctgcgcgtcgtccaagaa 347
            |||||||||||||||||   |||||||||||| ||||||||||||||||||||
Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaa 2037
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>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence
          Length = 174522

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 77    aacattatacaataataatttaggacaag 105
             ||||||||| |||||||||||||||||||
Sbjct: 86542 aacattatataataataatttaggacaag 86570
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>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence
          Length = 158476

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 77    aacattatacaataataatttaggacaag 105
             ||||||||| |||||||||||||||||||
Sbjct: 59372 aacattatataataataatttaggacaag 59344
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>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence
          Length = 188847

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 77     aacattatacaataataatttaggacaag 105
              ||||||||| |||||||||||||||||||
Sbjct: 157396 aacattatataataataatttaggacaag 157368
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 77       aacattatacaataataatttaggacaag 105
                ||||||||| |||||||||||||||||||
Sbjct: 16912630 aacattatataataataatttaggacaag 16912658
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>gb|AC007043.3|AC007043 Homo sapiens BAC clone RP11-507E21 from Y, complete sequence
          Length = 107402

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 77    aacattatacaataataatttaggacaag 105
             ||||||||| |||||||||||||||||||
Sbjct: 53709 aacattatataataataatttaggacaag 53681
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>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
              sequence
          Length = 228494

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 106    acaattttgacaaaactaaaaaa 128
              |||||||||||||||||||||||
Sbjct: 125565 acaattttgacaaaactaaaaaa 125543
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 296     cgctgccgccgagcacggacttgagc 321
               |||||||||||||||||| |||||||
Sbjct: 7136995 cgctgccgccgagcacggccttgagc 7137020
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>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13,
              complete sequence
          Length = 220733

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 76     aaacattatacaataataattt 97
              ||||||||||||||||||||||
Sbjct: 142402 aaacattatacaataataattt 142423
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>emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 in linkage group 7,
            complete sequence
          Length = 146969

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 76   aaacattatacaataataattt 97
            ||||||||||||||||||||||
Sbjct: 2882 aaacattatacaataataattt 2903
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>gb|AC152925.1| Tribolium castaneum  BAC T.cast_C17P12 (Clemson University Genomics
            Institute Tribolium castaneum BAC Library (Red Flour
            Beetle)) complete sequence
          Length = 50240

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 84   tacaataataatttaggacaagacaattttgacaaaa 120
            |||||| |||||||||||| | ||||| |||||||||
Sbjct: 2372 tacaattataatttaggacgaaacaatcttgacaaaa 2336
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>gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome 5, complete sequence
          Length = 196371

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     acattatacaataataattta 98
              |||||||||||||||||||||
Sbjct: 165774 acattatacaataataattta 165754
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>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence
          Length = 266344

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    caaaactaaaaaatgttgcac 136
              |||||||||||||||||||||
Sbjct: 216605 caaaactaaaaaatgttgcac 216625
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>gb|AF248696.1|AF248696 Gryllus veletis isolate Gveleti2 16S large subunit ribosomal RNA
           gene, partial sequence; mitochondrial gene for
           mitochondrial product
          Length = 499

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  caacaaaacattatacaataa 91
           |||||||||||||||||||||
Sbjct: 283 caacaaaacattatacaataa 263
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>gb|AF248695.1|AF248695 Gryllus veletis isolate Gveleti1 16S large subunit ribosomal RNA
           gene, partial sequence; mitochondrial gene for
           mitochondrial product
          Length = 499

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  caacaaaacattatacaataa 91
           |||||||||||||||||||||
Sbjct: 283 caacaaaacattatacaataa 263
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>gb|AF248685.1|AF248685 Gryllus bimaculatus 16S large subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 498

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  caacaaaacattatacaataa 91
           |||||||||||||||||||||
Sbjct: 283 caacaaaacattatacaataa 263
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>gb|AF212059.1|AF212059 Gryllus fultoni 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 523

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 71  caacaaaacattatacaataa 91
           |||||||||||||||||||||
Sbjct: 220 caacaaaacattatacaataa 240
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>gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complete sequence
          Length = 182156

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     acattatacaataataattta 98
              |||||||||||||||||||||
Sbjct: 148355 acattatacaataataattta 148375
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>gb|AC157569.12| Mus musculus chromosome 3, clone RP23-434M21, complete sequence
          Length = 205286

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gtgaaagattatgatacatt 47
              ||||||||||||||||||||
Sbjct: 179687 gtgaaagattatgatacatt 179706
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>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence
          Length = 207763

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gtgaaagattatgatacatt 47
              ||||||||||||||||||||
Sbjct: 179525 gtgaaagattatgatacatt 179506
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>gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, complete sequence
          Length = 171788

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    aattttgacaaaactaaaaa 127
              ||||||||||||||||||||
Sbjct: 165692 aattttgacaaaactaaaaa 165673
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     gccgctgccgccgagcacgg 313
               ||||||||||||||||||||
Sbjct: 2457731 gccgctgccgccgagcacgg 2457712
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>gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome 9, complete sequence
          Length = 184917

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gatacattttgaaagaagaa 59
              ||||||||||||||||||||
Sbjct: 145181 gatacattttgaaagaagaa 145200
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>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gatacattttgaaagaagaa 59
              ||||||||||||||||||||
Sbjct: 181464 gatacattttgaaagaagaa 181483
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>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    aagacaattttgacaaaact 122
              ||||||||||||||||||||
Sbjct: 122720 aagacaattttgacaaaact 122701
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>gb|AC092536.3| Homo sapiens BAC clone RP11-32N3 from 7, complete sequence
          Length = 132755

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    aattttgacaaaactaaaaa 127
              ||||||||||||||||||||
Sbjct: 112857 aattttgacaaaactaaaaa 112876
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>emb|AL603834.6| Mouse DNA sequence from clone RP23-113D4 on chromosome 11 Contains the
             Rpa1 gene for replication protein A1, the 5' end of a
             novel gene and a CpG island, complete sequence
          Length = 67911

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ttttgacaaaactaaaaaat 129
             ||||||||||||||||||||
Sbjct: 63577 ttttgacaaaactaaaaaat 63558
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>emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 in linkage group 14,
             complete sequence
          Length = 201228

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gatacattttgaaagaagaa 59
             ||||||||||||||||||||
Sbjct: 41604 gatacattttgaaagaagaa 41585
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>emb|BX663518.10| Zebrafish DNA sequence from clone CH211-214O7 in linkage group 7,
             complete sequence
          Length = 200579

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    aacaaaacattatacaataa 91
             ||||||||||||||||||||
Sbjct: 42878 aacaaaacattatacaataa 42897
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>gb|AC156560.2| Mus musculus BAC clone RP24-358N14 from chromosome 13, complete
            sequence
          Length = 163493

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   gatacattttgaaagaagaa 59
            ||||||||||||||||||||
Sbjct: 7978 gatacattttgaaagaagaa 7997
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>gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8, complete sequence
          Length = 190701

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tacaataataatttaggaca 103
             ||||||||||||||||||||
Sbjct: 83742 tacaataataatttaggaca 83761
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>gb|AC114763.6| Homo sapiens BAC clone RP11-369K2 from 2, complete sequence
          Length = 87248

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aattttgacaaaactaaaaa 127
             ||||||||||||||||||||
Sbjct: 24444 aattttgacaaaactaaaaa 24425
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>gb|AC115612.2| Dictyostelium discoideum chromosome 2 map 6245135-6357017 strain AX4,
             complete sequence
          Length = 111882

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ttttgacaaaactaaaaaat 129
             ||||||||||||||||||||
Sbjct: 72679 ttttgacaaaactaaaaaat 72660
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>gb|AF180355.1|AF180355 Brassica oleracea isolate B265 ABI1 protein (ABI1) gene, partial cds;
            RPS2 protein (RPS2) and N-myristoyl transferase (N-MYR)
            genes, complete cds; and CK1a protein (CK1a) gene,
            partial cds
          Length = 11725

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   aacaaaacattatacaataataat 95
            |||||| |||||||||||||||||
Sbjct: 2951 aacaaatcattatacaataataat 2928
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>gb|AC121504.14| Mus musculus chromosome 13, clone RP24-140A15, complete sequence
          Length = 156791

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   gatacattttgaaagaagaa 59
            ||||||||||||||||||||
Sbjct: 9322 gatacattttgaaagaagaa 9303
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>gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complete sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gatacattttgaaagaagaa 59
              ||||||||||||||||||||
Sbjct: 182324 gatacattttgaaagaagaa 182305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,610,889
Number of Sequences: 3902068
Number of extensions: 3610889
Number of successful extensions: 80354
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80169
Number of HSP's gapped (non-prelim): 185
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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