>KAMA_CLOSU (Q9XBQ8) L-lysine 2,3-aminomutase (EC 5.4.3.2) (KAM) (LAM)|
          Length = 416

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
 Frame = -2

Query: 141 LRGHSSSLCVP-----GPGGGGES 85
           LRGH+S  CVP      PGGGG++
Sbjct: 315 LRGHTSGYCVPTFVVDAPGGGGKT 338

>INO1_SPIPO (P42803) Inositol-3-phosphate synthase (EC 5.5.1.4)|
           (Myo-inositol-1-phosphate synthase) (MI-1-P synthase)
           (IPS)
          Length = 510

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 164 VVCTPQTNTSRVQDNLVALSDLVGRLVGAVEREE 265
           VV     NT R  D +V L+D +  L+ AVER+E
Sbjct: 225 VVVLWTANTERYSDLVVGLNDTMENLLAAVERDE 258

>NU4M_DIDMA (P41308) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 474

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 184 CLWSTNY--V*STTVLSTRALQLVVRTWSWWW 95
           CL +TNY  + S T++  R LQL++   + WW
Sbjct: 328 CLANTNYERIHSRTMILARGLQLILPLMTTWW 359

>NU4M_MACRO (P92668) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 184 CLWSTNY--V*STTVLSTRALQLVVRTWSWWW 95
           CL +TNY  + S T++  R LQL++     WW
Sbjct: 328 CLANTNYERIHSRTMILARGLQLILPLMCTWW 359

>RP54_RALEU (P28615) RNA polymerase sigma-54 factor|
          Length = 493

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 11  EQTCTQTNTRLGFKASYELAIH*QMDSPPPPGPGTHNELEC 133
           E+ CT+    L F+     AI   + S  PPG G  N  EC
Sbjct: 177 EEICTELPEELEFEIEEVHAILTLLQSFDPPGVGARNAAEC 217

>NIFN_HERSE (O87627) Nitrogenase iron-molybdenum cofactor biosynthesis protein|
           nifN
          Length = 443

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 332 PVPARVPRDLQQLHGALRGVPLLL 261
           P+PAR  R   QL  A+ G PLLL
Sbjct: 282 PIPARYRRQRSQLQDAMLGWPLLL 305


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,531,602
Number of Sequences: 219361
Number of extensions: 919421
Number of successful extensions: 3365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3352
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)