Clone Name	rbaet64d05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA	240	2e-60
2	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	240	2e-60
3	dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D...	240	2e-60
4	dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D...	240	2e-60
5	dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon...	240	2e-60
6	dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clon...	240	2e-60
7	dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clon...	240	2e-60
8	gb|AY108268.1| Zea mays PCO078526 mRNA sequence	208	7e-51
9	gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Can...	48	0.015
10	gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome...	42	0.95
11	gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ...	42	0.95
12	gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom...	42	0.95
13	emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chro...	42	0.95
14	gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mR...	42	0.95
15	gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Can...	42	0.95
16	gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, comple...	42	0.95
17	gb|AC107365.2| Danio rerio, clone -241I7, complete sequence	42	0.95
18	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	42	0.95
19	gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, c...	42	0.95
20	emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in...	42	0.95
21	gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete...	42	0.95
22	gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.18...	42	0.95
23	gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome	40	3.8
24	gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, compl...	40	3.8
25	gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's...	40	3.8
26	emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chr...	40	3.8
27	gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl...	40	3.8
28	gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete...	40	3.8
29	gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, com...	40	3.8
30	gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, comp...	40	3.8
31	gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance...	40	3.8
32	gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Canc...	40	3.8
33	dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, ...	40	3.8
34	gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ...	40	3.8
35	gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, co...	40	3.8
36	gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-223...	40	3.8
37	dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ...	40	3.8
38	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	40	3.8
39	gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, comple...	40	3.8
40	emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chr...	40	3.8
41	dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D...	40	3.8
42	gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, com...	40	3.8
43	emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chrom...	40	3.8
44	dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region	40	3.8
45	dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, co...	40	3.8

---

>ref|XM_478377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1469

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Minus

                                                                        
Query: 95   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 155  caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
            |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 215  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                         
Query: 275  tggctgttgaggt 287
            |||||||||||||
Sbjct: 939  tggctgttgaggt 927

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Plus

                                                                            
Query: 95       agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
                |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 19602762 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 19602821

                                                                            
Query: 155      caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
                |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 19602822 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 19602881

                                                                            
Query: 215      atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
                ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 19602882 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 19602941

                             
Query: 275      tggctgttgaggt 287
                |||||||||||||
Sbjct: 19602942 tggctgttgaggt 19602954

---

>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Plus

                                                                          
Query: 95     agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
              |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 146106 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 146165

                                                                          
Query: 155    caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
              |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 146166 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 146225

                                                                          
Query: 215    atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
              ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 146226 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 146285

                           
Query: 275    tggctgttgaggt 287
              |||||||||||||
Sbjct: 146286 tggctgttgaggt 146298

---

>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Plus

                                                                         
Query: 95    agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
             |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 41412 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 41471

                                                                         
Query: 155   caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
             |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 41472 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 41531

                                                                         
Query: 215   atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
             ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 41532 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 41591

                          
Query: 275   tggctgttgaggt 287
             |||||||||||||
Sbjct: 41592 tggctgttgaggt 41604

---

>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full
            insert sequence
          Length = 2822

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Minus

                                                                        
Query: 95   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 2584 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 2525

                                                                        
Query: 155  caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
            |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 2524 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 2465

                                                                        
Query: 215  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2464 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 2405

                         
Query: 275  tggctgttgaggt 287
            |||||||||||||
Sbjct: 2404 tggctgttgaggt 2392

---

>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full
            insert sequence
          Length = 1470

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Minus

                                                                        
Query: 95   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 155  caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
            |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 215  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                         
Query: 275  tggctgttgaggt 287
            |||||||||||||
Sbjct: 939  tggctgttgaggt 927

---

>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full
            insert sequence
          Length = 1482

 Score =  240 bits (121), Expect = 2e-60
 Identities = 175/193 (90%)
 Strand = Plus / Minus

                                                                        
Query: 95   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1224 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1165

                                                                        
Query: 155  caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
            |  ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1164 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1105

                                                                        
Query: 215  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 1104 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 1045

                         
Query: 275  tggctgttgaggt 287
            |||||||||||||
Sbjct: 1044 tggctgttgaggt 1032

---

>gb|AY108268.1| Zea mays PCO078526 mRNA sequence
          Length = 1437

 Score =  208 bits (105), Expect = 7e-51
 Identities = 171/193 (88%)
 Strand = Plus / Minus

                                                                        
Query: 95   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 154
            ||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||  | 
Sbjct: 1168 agggcgtcggcaccggcgacgatctcgaggatctccccggtgatcttggcctggcgctgt 1109

                                                                        
Query: 155  caattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 214
            |  |||||| | |||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1108 cggttgtaggcgatggagaggttcttgcggagctcgatggcgttgtcggtggcgctgctc 1049

                                                                        
Query: 215  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 274
            ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1048 atggcgctcatccgggcggcgagctcgctggcgagcgactcctgcagggcacggaggatc 989

                         
Query: 275  tggctgttgaggt 287
            |||||||||||||
Sbjct: 988  tggctgttgaggt 976

---

>gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87788

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 35    aaggaggcaaagagttatatataa 58
             ||||||||||||||||||||||||
Sbjct: 75558 aaggaggcaaagagttatatataa 75535

---

>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     agaagagaggagaaaaggagg 41
              |||||||||||||||||||||
Sbjct: 140157 agaagagaggagaaaaggagg 140177

---

>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    agaagagaggagaaaaggagg 41
             |||||||||||||||||||||
Sbjct: 15174 agaagagaggagaaaaggagg 15194

---

>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete
            sequence
          Length = 199356

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 21   agaagagaggagaaaaggagg 41
            |||||||||||||||||||||
Sbjct: 3705 agaagagaggagaaaaggagg 3685

---

>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part
             of a novel gene and a CpG island, complete sequence
          Length = 120529

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    agagaggagaaaaggaggcaaagag 48
             |||||||||||||||||| ||||||
Sbjct: 57721 agagaggagaaaaggaggaaaagag 57697

---

>gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mRNA, complete cds;
            nuclear gene for plastid product
          Length = 1351

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 98   gcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcg 150
            ||||| || ||||||||||||||||| || ||   ||||||||| ||||||||
Sbjct: 1174 gcgtctgcaccagcgacgatctcaagaatttcattggtgatcttagcctggcg 1122

---

>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180335

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 25   gagaggagaaaaggaggcaaa 45
            |||||||||||||||||||||
Sbjct: 8264 gagaggagaaaaggaggcaaa 8244

---

>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence
          Length = 54171

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  agaagagaggagaaaaggagg 41
           |||||||||||||||||||||
Sbjct: 459 agaagagaggagaaaaggagg 479

---

>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence
          Length = 128411

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     agaagagaggagaaaaggagg 41
              |||||||||||||||||||||
Sbjct: 127553 agaagagaggagaaaaggagg 127533

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 21       agaagagaggagaaaaggagg 41
                |||||||||||||||||||||
Sbjct: 18346945 agaagagaggagaaaaggagg 18346965

---

>gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    gataagtactagaagagagga 31
             |||||||||||||||||||||
Sbjct: 90350 gataagtactagaagagagga 90330

---

>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19,
             complete sequence
          Length = 202006

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    agaagagaggagaaaaggagg 41
             |||||||||||||||||||||
Sbjct: 35716 agaagagaggagaaaaggagg 35736

---

>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence
          Length = 179691

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     agaagagaggagaaaaggagg 41
              |||||||||||||||||||||
Sbjct: 178150 agaagagaggagaaaaggagg 178170

---

>gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.186_H_2, complete sequence
          Length = 128501

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    gataagtactagaagagagga 31
             |||||||||||||||||||||
Sbjct: 88143 gataagtactagaagagagga 88163

---

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgctgctcatggcgctcatc 226
               ||||||||||||||||||||
Sbjct: 2764884 cgctgctcatggcgctcatc 2764903

---

>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence
          Length = 232817

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aggagaaaaggaggcaaaga 47
             ||||||||||||||||||||
Sbjct: 78802 aggagaaaaggaggcaaaga 78783

---

>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 143705

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     ggagaaaaggaggcaaagag 48
              ||||||||||||||||||||
Sbjct: 125135 ggagaaaaggaggcaaagag 125116

---

>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1
              homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18
              (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal
              protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular
              carcinoma-related putative tumor suppressor (LPTS)
              pseudogene and the 3' end of a novel gene, complete
              sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tactagaagagaggagaaaa 36
              ||||||||||||||||||||
Sbjct: 191747 tactagaagagaggagaaaa 191728

---

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 94      cagggcgtcggcgccagcga 113
               ||||||||||||||||||||
Sbjct: 1196169 cagggcgtcggcgccagcga 1196188

---

>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence
          Length = 153203

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gcagctcagcccagggagga 83
             ||||||||||||||||||||
Sbjct: 13876 gcagctcagcccagggagga 13857

---

>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gaagagaggagaaaaggagg 41
             ||||||||||||||||||||
Sbjct: 27254 gaagagaggagaaaaggagg 27235

---

>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence
          Length = 206801

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   agaggagaaaaggaggcaaagagt 49
            ||||||||||||||| ||||||||
Sbjct: 3628 agaggagaaaaggagtcaaagagt 3605

---

>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152599

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ctcatggcgctcatcctggc 231
             ||||||||||||||||||||
Sbjct: 39643 ctcatggcgctcatcctggc 39624

---

>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138313

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctcatggcgctcatcctggc 231
              ||||||||||||||||||||
Sbjct: 114733 ctcatggcgctcatcctggc 114714

---

>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
             homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    agaagagaggagaaaaggag 40
             ||||||||||||||||||||
Sbjct: 76918 agaagagaggagaaaaggag 76937

---

>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gaagagaggagaaaaggagg 41
             ||||||||||||||||||||
Sbjct: 48112 gaagagaggagaaaaggagg 48131

---

>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence
          Length = 227950

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gaaaaggaggcaaagagtta 51
              ||||||||||||||||||||
Sbjct: 105449 gaaaaggaggcaaagagtta 105468

---

>gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-2236G12, complete sequence
          Length = 40405

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gaagagaggagaaaaggagg 41
             ||||||||||||||||||||
Sbjct: 10132 gaagagaggagaaaaggagg 10151

---

>dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830048L15
           product:unclassifiable, full insert sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  aagagaggagaaaaggaggcaaag 46
           |||||||||||| |||||||||||
Sbjct: 729 aagagaggagaagaggaggcaaag 706

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       ctagaagagaggagaaaagg 38
                ||||||||||||||||||||
Sbjct: 20600956 ctagaagagaggagaaaagg 20600937

---

>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence
          Length = 104269

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    ggcagctcagcccagggagg 82
             ||||||||||||||||||||
Sbjct: 81855 ggcagctcagcccagggagg 81874

---

>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete
             sequence
          Length = 129246

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gaagagaggagaaaaggagg 41
             ||||||||||||||||||||
Sbjct: 16741 gaagagaggagaaaaggagg 16760

---

>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ctagaagagaggagaaaagg 38
             ||||||||||||||||||||
Sbjct: 96514 ctagaagagaggagaaaagg 96495

---

>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence
          Length = 237824

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gaaaaggaggcaaagagtta 51
              ||||||||||||||||||||
Sbjct: 188353 gaaaaggaggcaaagagtta 188372

---

>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
              sequence
          Length = 209914

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     aagagaggagaaaaggaggcaaag 46
              |||||||||||| |||||||||||
Sbjct: 178379 aagagaggagaagaggaggcaaag 178356

---

>dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region
          Length = 4570

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 23   aagagaggagaaaaggaggcaaag 46
            |||||||||||| |||||||||||
Sbjct: 3905 aagagaggagaagaggaggcaaag 3882

---

>dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, complete cds
          Length = 3846

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gtggcgctgctcatggcgct 222
            ||||||||||||||||||||
Sbjct: 2294 gtggcgctgctcatggcgct 2313


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,417,980
Number of Sequences: 3902068
Number of extensions: 2417980
Number of successful extensions: 52608
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52425
Number of HSP's gapped (non-prelim): 183
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---